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Homology
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A835Z530_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z530_9STRA) HSP 1 Score: 1437 bits (3721), Expect = 0.000e+0 Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 1
Query: 1 MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVLSSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACAERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKDVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNVEMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQLWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSXXXXXXXXXXFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKVVQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS 2211
MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVLSSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACAERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKDVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNVEMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQLWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSXXXXXXXXXXFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKVVQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS
Sbjct: 1 MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVLSSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACAERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKDVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNVEMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQLWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSXXXXXXXXXXFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKVVQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS 737
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A7S1VGX5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VGX5_9EUKA) HSP 1 Score: 60.8 bits (146), Expect = 1.920e-7 Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 490 VVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWL 810
V R+A A AR + A +L+ G + +AAAAA + S+ L+ L P S CA AAQAG +D L+WLR RGC WDE+ + A A G + L WL
Sbjct: 28 VARVADAVARGGHVSLALLLEEA---GVTWTDEHLAAAAA--SGSLPLLQHLLRGRSPRSPTLCAGAAQAGAIDCLEWLRERGCAWDES-VVTAAVAAGDLPLLRWL 128
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A2J8A5I5_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A5I5_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 1.180e-5 Identity = 121/481 (25.16%), Postives = 182/481 (37.84%), Query Frame = 1
Query: 259 SGGLVGYSSFLACAERCN--ADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKD-VLRFLQQAGYTDV------VRLACAAARYENTLAASVLDSVIRRGK----DKVPDVIAAAAAATTPSVRTLERL--------FTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAG--GSVAALTWLCEQGVG-DWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLA 1629
+ G + +LA C+ ++ AA AG + + RWL G + + A A Q D +L + G TD+ LAC+AAR + ++D +++R + + + AAAA + TL+RL F G L++ A + A K++WL G+G + AA ++ LTWL +G DW + AA G DA+R+L + P + G A+A L++LQ A+ + AL + G VV W E G P L+A G +E L L +R CL D C A C+ + L WL+ QGC VP GH D+ +AA+ L L CP + + W+ SG G + L LL+ CP D R + A
Sbjct: 1762 ASGCLENLQWLAAHVGCSLTGEVFEAAAAAGRLDVCRWLQQQGCYGQGWALSGAKAAAGAGQRALVDWILANARDPGCTDLDGVKHSTSLACSAARGGHV---GLMDWLLQRHELERDRRAAATLLVAAAAEGCDLPTLQRLCHIYPQVAFGLGRVLTS--AAGSPTADWTSKVEWLEGQGAAASPSYDACTRAASRPDALDRLTWLRGRGYRWDWP------VTEAAAVAGNLDALRYLLAEGCPLV--------DSTGVAAARAGQLASLQ-ALHAHSGSSTLRDLALACAARGGHLPVVA----WWLERRLVGIARLRQ-------FPTLLLEAAKSGSVELLAWLRDRGCLWDEDSFHCAAWAGCEAA--LEWLVAQGCP----VP---GPYGHR--------DDPYLTAALKEDWSTLACLRRLGCPW-----QPLDWEGGTFSGAVGQ--GCSVPALHRLLELGCPVDWRRTIEA 2187
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A2J7ZI88_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZI88_9CHLO) HSP 1 Score: 56.6 bits (135), Expect = 2.720e-5 Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 589 VIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQG--VGDWSE 840
V+ AAAA P+V L AG L+ AAAA+AG ++ L WLR R CPWDE M AA S L WL EQG VGD SE
Sbjct: 28 VMRAAAAGHLPAVAWLVERLGAGAALTIHVFAAAARAGSMELLGWLRARDCPWDE----MVFAAARSEQ-LEWLVEQGCLVGDDSE 108
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | Trimin1|353756|estExt_Genemark1.C_Ctg_1820020 |
| Hectar predicted targeting category | other localisation |
| TranscriptId | 354078 |
| Track | FilteredModels1 |
| ProteinId | 353756 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16886 ID=mRNA_16886|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2357bp|location=Sequence derived from alignment at Contig_182:122721..132543- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGCTCAGCAGGCGCGGCCGCAGGGCCTGACCCAGGCTGACATGCTGGC GATCATTCACGCCAATGCCGCGTTGGGCCGATTCCTCAATGTCAAGGCCC TTTGGATGAGGGCCACACGAGAGCATGGCATCAATGCCACTGCGGTGCTG TCTTCAGAGGTTCTGGGCATACTCGCGCGGCACGGAGAGTGGGACCATGC TGTGCTCGTGCTGTCAAAGTTGTTGGAGGCGGGCGTCTCTCCACTCATCA AGCAGGGCTCGGGCGGGCTGGTGGGCTACAGCTCGTTCCTGGCGTGCGCC GAGCGCTGCAACGCGGACATATCGCGAGCCGCTATCAAAGCAGGGAGCGT CAAGATCACGCGCTGGCTGCACGACACGGAGCTCCTGAGCGCTGGGGAGG GGCGCGCCAAGGGCGAGCTGGGCGCGCTCGCGGTGCAGCACGGCAACAAG GACGTGCTGCGCTTCCTGCAGCAGGCGGGCTACACGGACGTCGTGCGCCT CGCGTGCGCCGCCGCGCGCTACGAGAACACCCTGGCCGCCTCCGTCCTGG ACTCCGTCATCAGGAGGGGCAAGGACAAGGTGCCCGACGTCATCGCGGCG GCCGCTGCGGCGACCACCCCCTCTGTGAGGACCCTGGAGCGGCTGTTTAC CGCGGGGTATCCGCTGAGCACGGAGGCGTGCGCGGCGGCGGCGCAGGCGG GGCAGCTCGACAAGCTGCAGTGGCTGCGGGGCAGGGGGTGCCCGTGGGAT GAGGCGCGGATCTGCATGGATGCCGCGGCGGGAGGCTCAGTGGCCGCGCT GACGTGGCTCTGCGAGCAGGGGGTGGGGGACTGGTCGGAGGCGGGCACGG GGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGACGACGCCGTCAGG TGGCTGCGCTCGCGAGACCCCCCTGCCCCCTGGCCGCAAGCCGGACTCTG GTGGTACACAGACGGTGGCGCCAGTGCGGACTGCTGGCCCCTCAGCACCC TCCAGTTGGCGATCAGTGAGGGCTGCCCGGCAGGGGACTGGTCCAGCGAC GCGCTCCGCCTTCTGGAGAAGGCCGGCAGGGGCGATGTGGTGCAGCACTG CACGCAGTGGGTGACGGAGGAAGCTGAGTCGGGAACTGAGTCGGACAGTG AGTCGGAAAGTGAGCCGAAGACCCTGCCCGAGCAGGCGCTGGACGCGGTG ATGCAGGGAGACTTGGAGGCGCTGCAAAACCTGGCGGAGAGGGAGTGCCT GGAGGATCCCCGCGGGGAGCTGTGCACTGTTGCCGCGTCCTGTGACCATT CGGACGTGCTGCTATGGCTGCTGGAGCAGGGCTGCAAGTGGCAGGAGGAC GTGCCGGAGTACGCAGCTCGCGTCGGGCATGTGCCCCTCCTGGAGAGGCT CGCCATCGATGAGGTGCTAGAGAGCGCTGCCGTGGGAGGACACATGGGCG TTCTGGAGCTGCTGGCTGAGAGGCGCTGCCCACAAGGCTGCCCCAGGGAC GAACAAGTGTCTTGGCAAGCAGCACTGGGGTCCGGCGACCAGGACAGTGA AGGTGGCAAGCATATGGAGGTGCTGCAGTATTTGCTGCAAGAGCAGTGCC CGTGGGACGTGCGAAGTGTGCTCCTCGCAGCTGCTTCAGCGGGCAACGTG GAAATGCTGCAATTCCTGCGCGAACACAACGGGGGCGAGCTGTGGGACCA GGAACTGGCAGGGGAAATGCTCTGTGATGCGGCGTGCTGGGACCATCTCG AGGCAACCAAGTGGCTCCGCACTGAAGCAAATGCTCCGTGGCCCAGTCAG CTGTGGTTCGAAGATGGCGTCAAGGAGTACAGAGCAGATGCGGCAGAGCT GAGTGACGATATTTCCATGTATGACAAAGATTTCACGAAGGATTCAGAGC CACTCAGTCAGATCGAGGAAACGGGAAGTGACTCGGAAACGGAAAGTGAC TCGGAAACGGAAAGTTTCTCGCATGCTGCTGATGCTGACGATGCTGAGTC ACGGCGCATGCAGTGCCCATGGTGGGCCCTCGAGCCACTCAAGTGGGCGG TATCTGAGGGGTGTCCCCTAGGTGAGTGGCCTGAAGAGGTGCTGAAAGTG GTCCAAGCTGTTGACCCGGAGGTAGGGGACTGGGTCAAGCAGCAGCTGCA GCAGGGGGAAGAGCCCGCCAAGTCAAATGTGGGAACAGAGCACAAAGAAG AGCAGGACAGCTAGGAGACAGAGTTGTGACACGACTGAGAGTATGTCGAG CATAGGTTTCACATAGCAGATGTGTGCTGAGGGTCCGAAGGCAAGGCGGG GCGCCGAATGACATTGCTCGCTGCCACTTGATGGCAAAAAAATACACATA AAGCTGC back to topprotein sequence of jgi.p|Trimin1|353756 >Trimin1|353756|estExt_Genemark1.C_Ctg_1820020 ID=Trimin1|353756|estExt_Genemark1.C_Ctg_1820020|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=738bp
MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVL SSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACA ERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNK DVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAA AAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWD EARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVR WLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSD ALRLLEKAGRGDVVQHCTQWVTEEAESGTESDSESESEPKTLPEQALDAV MQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQED VPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRD EQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNV EMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQ LWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSETESD SETESFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKV VQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS* back to topmRNA from alignment at Contig_182:122721..132543- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_16886 ID=mRNA_16886|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9823bp|location=Sequence derived from alignment at Contig_182:122721..132543- (Tribonema minus UTEX_B_3156 ) ATGGCTCAGCAGGCGCGGCCGCAGGGCCTGACCCAGGCTGACATGCTGGC
GATCATTCACGCCAATGCCGCGTTGGGCCGATTCCTCAATGTCAAGGCCC
TTTGGATGAGGGCCACACGAGAGCATGGCATCAATGCCACTGCGGTGCTG
TCTTCAGAGGTATGTAGGTATGCTAGTGCCTAGGGTTAGGGTCAGAGTTG
GGGTCAGGACCGCGTTTCAATAGCTTGTGTTGCCTGCACATCGATCGCTG
ATCAGAGACAACAATGCGTGGCACCAATGGATCGTTGTGATGTGTCATGA
CATGTTATGCAATGAGATTTGCATGAGTAACGGTGCTGTATGACGATGGC
AGCCGGTTGGCTCTACTTGCCTCCCGCCGCGGTGATGACACAGCTTTGCA
CGTCAGTATGACACACCAACGTCCACAGCATTGAGCGACGTGCCCAGAAA
GCAGCGCTGGCTTAAAAGTGTATTGCCCATGCTGTTGAGATCATTGCCCT
GCAAGACACCTCTCGTGCCCTTACTCTGCAGCTGTGTCAGTAGGGCGACT
CTCCTGGCCATACAATCTATCAAGCTGGCACAAAAACCTCCAATCCCTTC
CAAGTTGTCACATGTTCCGGTTGCCTGCAACCAGGAAAGGCGTGTCACTG
CGTAACATGGTCATCTGTCGGCTCACCATACTGCACTGCGTTGAGGGGTG
TAAACTGCCCTTAGCCCGCCACTCACTTCGCAGCCTTCACCTCGGACCTT
TCTGCCACCTTCCACCTTCACCCACCTGCCTCACAATCTCTGCCCCTGGC
GGCGCACGACAGGTTCTGGGCATACTCGCGCGGCACGGAGAGTGGGACCA
TGCTGTGCTCGTGCTGTCAAAGTTGTTGGAGGCGGGCGTCTCTCCACTCA
TCAAGCAGGGCTCGGGCGGGCTGGTGGGCTACAGCTCGTTCCTGGCGTGC
GCCGAGCGCTGCAACGCGGACATATCGCGAGCCGCTATCAAAGCAGGGTA
TGTATAGTAGTACTATGTATGTATGTGTGGATGTGCTGGTCACGCACATG
AGGTTTTGTGTGTGTCGTAGCGCCCTGAAAGTTGTTTGTGGTCCAGTCTG
GTACTGCACTGTGTGGAACTAATCGTGTACTTGCACACAACTTCAAGGCT
CAGGGGCCCTGGACCCCACTACACACACCCTATTTTCCGCAGCCTTTGAC
CACTTTGGCGCTATGTCACGCGACACCCAAGCGCTGCTACACGCACTCGC
CGAGCAGAGCTCGCAGGGCAGCTACAATCTCGCGCAGCGCGTTGCCTTCT
GGCGCCGCCGCGCCTCCCTCGCGCTACAGCGCGCGCTCACACGTGTCGTG
ATCGACAACTGGAACGCAGTCATTGCCCCTGATGGCGACGTCAGTGCTTA
CCGCCGCATCGCACTGTTGCAAGTGCCGCGGCCCTCGCCGGCCAGCGCCG
AACCGCCGGCCCCTCCGTAGATTTAGTTATCGCCCGATTATCGTGTGCTC
AACCCCCATGCGGTCCAGGACATAATATACAACTTCAAGGCCAATGATTG
ATATTGGCTGGTAGGCACTTCTGCTTTCACTGGCAACATACCGACATTGC
TTCCAGAGCGGTGTCAAGGGCAATCCGTCAGAGATGTTGGTGACAAAGCA
TAGCAGTGCGTGGCAGGAGCTGACCTCATCTCATATGTCTTGACAAAGTA
TGTCGACACTGCTCAACAGTACCCACCCAAGCATGCATGCTCCATTCATT
GGTGGTTGTGCCCATCTACCTGGACATGAACCAATGTGCCGGGTAGGCAA
GAGCGAGGGCCAGCAGTGCTGCGCGCAATGTTGCGGTGCTTAGCATTAGC
ATTAACCTCGAGCTCCAGCATTGGTGCTAGCAGTCAGCAGTGTCGTGCTC
ACGCTCACCGGCATGCTGAACACTGACGCGGCACATTTGCGCTCACGTGG
CATGCTCAGTAGCGCATCAGTGATCCACACGTGCGTGTGTACCTCTAGCC
CTAAGGATCGTTGTCAGCATCTCTCACCGCAGCTAGCTAACCCTAGCTAG
GACTGCCACTCATCCCCCCCCCAACCCTAACCCTAACCCTGATACGCAGG
AGCGTCAAGATCACGCGCTGGCTGCACGACACGGAGCTCCTGAGCGCTGG
GGAGGGGCGCGCCAAGGGCGAGCTGGGCGCGCTCGCGGTGCAGCACGGCA
ACAAGGACGTGCTGCGCTTCCTGCAGCAGGCGGGCTACACGGACGTCGTG
CGCCTCGCGTGCGCCGCCGCGCGCTACGAGAACACCCTGGCCGCCTCCGT
CCTGGACTCCGTCATCAGGAGGGGCAAGGACAAGGTGCCCGACGTCATCG
CGGCGGCCGCTGCGGCGACCACCCCCTCTGTGAGGACCCTGGAGCGGCTG
TTTACCGCGGGGTATCCGCTGAGCACGGAGGCGTGCGCGGCGGCGGCGCA
GGCGGGGCAGCTCGACAAGCTGCAGTGGCTGCGGGGCAGGGGGTGCCCGT
GGGATGAGGCGCGGATCTGCATGGATGCCGCGGCGGGAGGCTCAGTGGCC
GCGCTGACGTGGCTCTGCGAGCAGGGGGTGGGGGACTGGTCGGAGGCGGG
CACGGGGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGTCAGTGGTG
CTTAACCCGAACCCTAACCCTAACCTAACCCTAACCTATTGGCGGGTACG
GGGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGTCAGTGGTGCATT
GCAGTGGTGCATTGCTGGGATGCGGTTGAAGTGAGCTCGTGGCGTGTCCT
TGCTGTGCTAGGGTTTAGACGAGGAAAGGGATGAAGCTGTGGTATAGGTA
TGAGCCTGCCACCTTTGCGATCGGCACGAAACGCATGTGTCGCGATGGCG
GGTGTGTGTGTGTGTGCTCATCGCTGGTCGCTGCGGTTGGTATGTATGTA
TGCAACGCCGTGAGCGCTGTCGCTGCTTCCTCGAGCACTGCTGTGGTGCA
TGGGGCAGTGGATGTGCGGCGCAGGCGTGCAGCGCAAAGAGTACCTTGAA
GTGTCATTCGAATTGGAGATACAGGCCTATAATTGTAAGAAAGGGAGTGC
ACCGAGTGCTGATGTTACCATTAAGGCAAGGTCATGATACGCAGCTGTGT
CAGGTCCCCGGAGCCTGGTGTTCGAGTGTTGAACTTGAAGTTCATGTGAA
ACTGCACGTAGAGCTTGGTACGTGCCCCTGAAGTACAGACTAGCATGTGA
CCTTGAAGTGTGGGAAGCGTATTTGTAGTGCATGCCCCCCTTGACTTGCA
TGCGTGCTCATGTCATGCCATCGTGGTGGTTGTTGGAGCTTCGATGCCAA
TCTGGACCTTTGTTGTACTGCATGAGGTCAACAATAACACTGCTCTGTAT
CAGGCCAACAACACAATTCGGGCAGTGTATCAAGCTGGCGGTGGCTCAAA
GGTCAATCACAAGTGCAAGCAGCGTCAAAGTGTGTGCGGGAGCGGCACAC
AGGACTTGAACATCACCATGCAGCAGCACCAACAACTTGATCCGCACATG
AGGAGCCAACATCCGATCACCAAGAGGGCAGTACTAATGTGTACTTCTTT
CCTTGGTGTGTTAGGTGTGTTAGAATGGACAGACTCCTGGTTATCATGCA
CGAGACGCCTTACAGTAGTACATTTATGTGCCACTGTATCTCATAGGGAC
GGTTACAAACAAGTTACAGCCACGCAGCGTACCGGTTATTGTTGTATCAT
CGCACTTTCAACAGCAACAGCAGTAGTCACGACTGATCACTGCCCCTGCC
GCTCCCCCTACCCTGCCCGCGATTTCACAGGACGACGCCGTCAGGTGGCT
GCGCTCGCGAGACCCCCCTGCCCCCTGGCCGCAAGCCGGACTCTGGTGGT
ACACAGACGGTGGCGCCAGTGCGGACTGCTGGCCCCTCAGCACCCTCCAG
TTGGCGATCAGTGAGGGCTGCCCGGCAGGGGACTGGTCCAGCGACGCGCT
CCGCCTTCTGGAGAAGGCCGGCAGGGGCGATGTGGTGCAGCACTGCACGC
AGTGGGTGACGGAGGAAGCTGAGTCGGGAACTGAGTCGGACAGTGAGTCG
GAAAGTGAGCCGAAGACCCTGCCCGAGCAGGCGCTGGACGCGGTGATGCA
GGGAGACTTGGAGGCGCTGCAAAACCTGGCGGAGAGGGAGTGCCTGGAGG
ATCCCCGCGGGGAGCTGTGCACTGTTGCCGCGTCCTGTGACCATTCGGAC
GTGCTGCTATGGCTGCTGGAGCAGGGCTGCAAGTGGCAGGAGGACGTGCC
GGAGTACGCAGCTCGCGTCGGGCATGTGCCCCTCCTGGAGAGGCTCGCCA
TGTGAGTGTGTACTGCTGATGCACTTTCAGCAGCAGTACTCGCAGCTGAC
CGCGCATACGCATACATCTCAAGTACTCACGTGTGCATGTATGTATGTAC
GTGCTCCGACGTACTGGTACATTCACCACTCGACATGCTGTAAGAGTAAG
CACGCTTGCGCACGTGATGCCATGGCACCACTTGCCGAGCCACATCAAAC
AATACTTTGAAATGAAGTGTACATCATGCGCCCATGGTCTGTAGGTGGCA
GTGGCTAACCCAAGGGGTGACACACAGACCTGAAAGCGATGCTCAACCGT
GCACCAACATGCACGGACAGTAGCCATGTATGGCTTTGTGATTTTTATTT
TCAGTGCCTTGCATGTGAACTACTGTACAGAATCGTGACAAGTATGTGAT
CTTTGCCATGTTATATATTGCACACCTGCCCGCCGCAGCCAAGGGTGCAA
ATGGACCCCTGAGATTGCTGGTTGTGCTGCGCGGCACGGGCACGTGAAAG
CACTGACTTGGCTCCTTCAGCGCGACTGTCCGCTGAGCGATGAGGTGCTA
GAGAGCGCTGCCGTGGGAGGTGAGCAGGCGCCCTAATGTATGTATGCATG
TGCAGACAGGCAACACTGGGGGTCAGTATCTCAACGGTTTCCGCTCATGA
TCAGGGTTAGGAGCAGGGCAAAGGTTAAGGTCAGGCGTGTGTGGTGTGAC
CAGCCTGGGTTGCTGGTGTATACGCATGCTGTGCTGCGATTGCGCAGCTG
CTGTTAAACACCTTAGGGTCAGGTGGTTTTGCTCACTTGACTCTGCTTGC
AAGAGGAGTGGCACAGGACTGCATGTAAAAGTATGTATTGTTTGTGTAGT
TGCACTGGTGGCTGTGCTTGGCCACTGGTGTATGTTGTGACGCATCATCA
TGATGACTCCATCTATTGCTTCAAGTCAGGACCATGGCACTTCAATTGTC
ACTATAACCCTGAGCAACCTGTAGACATTGCCTATCCCCCCCCTCTGTCT
AGTAGACAGAGGGGGGGGGTCCACAGTTACATTCTGAGCGCAGCGCAAAG
CAACATGTTGCTGGATATCGGCAATTTTTTAGCTTGTCGGCAATTTGATC
TCTGCATCAGAAACATACACCGATACAACGGTGCAACAATGCAGAGCGGT
GACTCTTGCGAATCTGAAGCAGCATGTACTATTCCTGTGCTCTCACGTTC
ACACGTGCGGTGTCCCAGTTGCAATTGGTAGCACTGCCGACTGCTCTTTT
GCTGCAATCAACGGCCGCGTTGTATGTGGCAATGGACAGGCATGTGCAGA
CACTTGACCAGGCTGCGCAGAGATGGCAGTTATCAGAGCTCAGCGATGAC
AGCTAGCATGTATTTCTGCATGTTTGCACAGTATGTAAGACAGCAAGGTT
GAACTGTCGCACACTCTTGCCTACCCGCTGTGGTGTGTTGATTGCCAGGC
GGCTGTTGTCATTGAGTGCTTGGTGTTCGTCATCATTCACAGTTGAAGTA
CGACCACTTGGTGTCCCCCTTTCCTTCCCCTGCAGGACACATGGGCGTTC
TGGAGCTGCTGGCTGAGAGGCGCTGCCCACAGTCTGTCAAAGCAACCAGA
GCCGCTGCCTACAATGGTAAGCCTGATGCCGCTGTGAGTGCATGTTGCTC
TTCAAGTTGTGTTCCACAAGTTTGGGTGTCGGCAGGTGCCGCAGTGCAAC
CATCACCATTGAGGATCCTGTGCTGCCAAGTGCACACACCGCACAGCTGC
ATTGGTGTGTGACTTGCGTGAGCCCGAGCCCAATCAGCGGCAAAATGTGA
GGCAATTGACCAGAGCCAAGTTCATAGCTAGATGTGATGCACTCACCCTG
TTGTCCCAGGAACTGCCCCAAATGCACAAATGGCCTGCTGTACCCTTTGA
CCCAGCCAGCCATAAAGTGTGTTGCATTGCATCGAGGGCGCTGGCATTGT
TTGCAGTTGGTGCACAACGCTCCCGCTACAGTGTTCGGTTTGCATATGCT
GCTTCAAATGTCTTGATGCCATGCAACAAGAGACATGTGCTGCACCAACA
GGTGTCTCTGGCAGACCCAATACTGTGCTGCCAAGCAACTTATCCTCCAC
ATGCGGCAGTACTCTTGTTGCACCAAATGAGATTGCAGCATGTACCTTGA
CACAAGCATTGAGCACTCAATCACATGTTTGTGTTGCCACATGGAGGGAG
GCACATACACTGTGCCTCTTCACATGTATGTTTGTACGCAGACTGCATCC
GGCAGACACGCTACCATGTAGGTCGCTTGCCACAAAAATGTTGTTTTACG
TAATTACTTGGTTGTAATTCGTATTTCAGTGTCTTTTAGTTCTCTGGTAT
GATTTTTCCTTAAAAAACAACAACGACGCCTTTGCCTATCTATGATAGCA
CCCCTCCTTTCGAAGTTCCGCTTTCTTTTATATCCTCAAGGTCCTCTGTA
AAACGAAGATTTTCTTTTGTGCTCTGCATGCTGTTAGGGCACCTTCAGGC
TCTGCAGTTCTTGCGCGACAGAGGCTGCCCCAGGGACGAACAAGTGTCTT
GGCAAGCAGCACTGGGGTCCGGCGACCAGGACAGTGAAGGTCAGTGTGCA
TGTACGTATCGCAGTAGCTCACAGGCTGAGAGCTTGCACATGCGTGGTTT
TGTAAACGGTCGACTAAGGATCAGCGTCCAAAAACATTATGCACGTGCAT
TGACGCACCTATATGATTATATGACACTCCAAACCAAGCAAAGTATGTAG
ACATAATCTGTGACAAAGGAGAGTCCAGTGCGCATTGATAAACGACTGAG
GGGCGCATGGGAGACGCAGCTGTTTTTGGGCTATTCACCGCACTTGACCA
TTGTCTGAATGTGATGATGATCATGCAACCGTCGGTGGCCGGTGAAGTGC
AATGGACGTTGCAGGGCAGGTTTCTGCCTTTGTCAATGTGCGTGCCGGAA
TACCTTTGAACTACATGCATACATACCTCTGCGTGCATTCTTGCCATTTG
TTGAGGCGAATTGGTTGATCAGCCTACAGGTGGACCCCTTAAGTGGGTGC
GCACAGGTTCCGGAACCGATCTTTCATCACACACGGCAGAGCCCTTGCAA
GCTGAGTCATGTCACACTTGAAGGTGACCAACGACTCAAAGCCCTTATGG
CAGAGACCTGTGCTGGCTGAGTTGTGTCGAATTAACTTGTTAGATCAGAG
GCGCTGTCGGGATGGGCCACTGAGTCACTGAGTGACTCTGAGTCACTGAG
TGACTCTGTGTCACTGACGCAACCTGCATGACTCATTGTCGGGGATGGGG
CCCCTGACACAACATCATAGCAGCAGGATGCCAGGGTGAGCCGAGTGATG
TTGCGTTGAGATGATCCATGGCGTGAGAGGCCATTGGGGGGCATTGGCGC
ATAAACATCAACGAGCGCCGGTGCATCTCTGTGCAAGAGGTTTGTTCAAC
ACTTCTGAAGACTGGAGTGCAACTTGTGTTGCAACTTGCTGGCAGTATGC
GGTGCCCTCCTTCCTGTAACGCTAAGTATCTGTCAACAAAAGAACTCTGG
ACGAACTGTGGCTCAGCACGTGCTTTGTCAGAAATGTCAATTACAAGTTG
AAGTTGTGTTTGGCACCGCTGCCTTATTTTGCTCCGGAAGGCCAATTTCT
CTAGCTGTGCTTGCCACCTCTGAAAGCCAGTCAGATCTCATGAGAATTGG
TTGAGCCAAAATGGTAAACCCTTCAATCTGCCGTCACAGTCAGCATCACA
GTCACAATGTATATATGTGTGCAGTCTACTACACTCTCACAAGTGCCAAG
CACTTGTCTTGTGGAAGTGTCAGTCAACAAATAGGCTTTGAATTGTTGCA
TACGACACCTCTCCTTCAAGTAAAGGGGAGGGTACCCGATGCTGATGCTC
TTTAAACTCCAATGACTCAATGGTGTCCCAGCGTGAGAAGTCTAACTCTG
CATTTCGATGAAAGCACCAGTCATCTGCCTTCGGCCGCTGTCGTGATGCT
GCCATATAGTCATGCTCATGTGACTCACCTTGGTTCATTCACTGAGACAT
CATGTGTAAACCTCAAGTTGTGACGCTGCTGCGTTGCGGTAACGCGCATG
TACAGGTGGCAAGCATATGGAGGTGCTGCAGTATTTGCTGCAAGAGCAGT
GCCCGTGGGACGTGCGAAGTGTGCTCCTCGCAGCTGCTTCAGGTATGTAC
TCTGTGCCAGTACAATGGTTTTGTAGTACGTTTAAAGCGTTTGAAATGCT
GTGTGGCGATGTCGTTTCGCTGATGCTGGACAAACATGCACTCTCAGGTA
TTTTTTGCTGATGATCTGGTGTTGGCGCCCTGATTGCGAAACGCTTGTGA
ATACACCTATGATAATAGTGCAGAAACTGGCGCAATGCCGCTTGTCCATG
CATGTTTGGCATACTCAAATCAAGGTGCTCTGCCCTGCGGCCAGACACTG
TGATAGTGTTTTCTTTGTCATCGTGCCCACCATCTGTTGGGTGCAAAGCT
TCTGAACCTGACATTGTTCAAGCGAGGTTGTATGTGCAACGGAGCAGCCA
TTGATCAAGAGTGTGCCACTCCATCTGTAACGGATTTTTGCACAAATTTG
TTTGACATGTCTGCATGTTGCCACTTCAGACGGGCAAATGAGCAAACAAT
ACTGCCACATCAAGACTGCCATCTCCAGCGCGCACATTACACCTGCAGCA
GTCCCCTGACCCCTCCCTGTGGCCGCCTGCCTGCCATGCTCTCTTGCGCT
TTTAGCGGGCAACGTGGAAATGCTGCAATTCCTGCGCGAACACAACGGGG
GCGAGCTGTGGGACCAGGAACTGGCAGGGGAAATGCTCTGTGATGCGGCG
TGCTGGGACCATCTCGAGGCAACCAAGTGGCTCCGCACTGAAGCAAATGC
TCCGTGGCCCAGTCAGCTGTGGTTCGAAGATGGCGTCAAGGAGTACAGAG
CAGATGCGGCAGAGCTGAGTGACGATATTTCCATGTATGACAAAGATTTC
ACGAAGGATTCAGAGCCACTCAGTCAGATCGAGGAAACGGGAAGTGACTC
GGAAACGGAAAGTGACTCGGAAACGGAAAGTTTCTCGCATGCTGCTGATG
CTGACGATGCTGAGTCACGGCGCATGCAGTGCCCATGGTGGGCCCTCGAG
CCACTCAAGTGGGCGGTATCTGAGGGGTGTCCCCTAGGTGAGTGGCCTGA
AGAGGTGCTGAAAGTGGTCCAAGCTGTTGACCCGGAGGTAGGGGACTGGG
TCAAGCAGCAGCTGCAGCAGGGGGAAGAGCCCGCCAAGTCAAATGTGGGA
ACAGAGCACAAAGAAGAGCAGGACAGCTAGGAGACAGAGTTGTGACACGA
CTGAGAGTATGTCGAGCATAGGTTTCACATAGCAGATGTGTGCTGAGGGT
CCGAAGGCAAGGCGGGGCGCCGAATGACATTGCTCGCTGCCACTTGATGG
CAAAAAAATACACATAAAGCTGC back to topCoding sequence (CDS) from alignment at Contig_182:122721..132543- >mRNA_16886 ID=mRNA_16886|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2214bp|location=Sequence derived from alignment at Contig_182:122721..132543- (Tribonema minus UTEX_B_3156 ) ATGGCTCAGCAGGCGCGGCCGCAGGGCCTGACCCAGGCTGACATGCTGGC GATCATTCACGCCAATGCCGCGTTGGGCCGATTCCTCAATGTCAAGGCCC TTTGGATGAGGGCCACACGAGAGCATGGCATCAATGCCACTGCGGTGCTG TCTTCAGAGGTTCTGGGCATACTCGCGCGGCACGGAGAGTGGGACCATGC TGTGCTCGTGCTGTCAAAGTTGTTGGAGGCGGGCGTCTCTCCACTCATCA AGCAGGGCTCGGGCGGGCTGGTGGGCTACAGCTCGTTCCTGGCGTGCGCC GAGCGCTGCAACGCGGACATATCGCGAGCCGCTATCAAAGCAGGGAGCGT CAAGATCACGCGCTGGCTGCACGACACGGAGCTCCTGAGCGCTGGGGAGG GGCGCGCCAAGGGCGAGCTGGGCGCGCTCGCGGTGCAGCACGGCAACAAG GACGTGCTGCGCTTCCTGCAGCAGGCGGGCTACACGGACGTCGTGCGCCT CGCGTGCGCCGCCGCGCGCTACGAGAACACCCTGGCCGCCTCCGTCCTGG ACTCCGTCATCAGGAGGGGCAAGGACAAGGTGCCCGACGTCATCGCGGCG GCCGCTGCGGCGACCACCCCCTCTGTGAGGACCCTGGAGCGGCTGTTTAC CGCGGGGTATCCGCTGAGCACGGAGGCGTGCGCGGCGGCGGCGCAGGCGG GGCAGCTCGACAAGCTGCAGTGGCTGCGGGGCAGGGGGTGCCCGTGGGAT GAGGCGCGGATCTGCATGGATGCCGCGGCGGGAGGCTCAGTGGCCGCGCT GACGTGGCTCTGCGAGCAGGGGGTGGGGGACTGGTCGGAGGCGGGCACGG GGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGACGACGCCGTCAGG TGGCTGCGCTCGCGAGACCCCCCTGCCCCCTGGCCGCAAGCCGGACTCTG GTGGTACACAGACGGTGGCGCCAGTGCGGACTGCTGGCCCCTCAGCACCC TCCAGTTGGCGATCAGTGAGGGCTGCCCGGCAGGGGACTGGTCCAGCGAC GCGCTCCGCCTTCTGGAGAAGGCCGGCAGGGGCGATGTGGTGCAGCACTG CACGCAGTGGGTGACGGAGGAAGCTGAGTCGGGAACTGAGTCGGACAGTG AGTCGGAAAGTGAGCCGAAGACCCTGCCCGAGCAGGCGCTGGACGCGGTG ATGCAGGGAGACTTGGAGGCGCTGCAAAACCTGGCGGAGAGGGAGTGCCT GGAGGATCCCCGCGGGGAGCTGTGCACTGTTGCCGCGTCCTGTGACCATT CGGACGTGCTGCTATGGCTGCTGGAGCAGGGCTGCAAGTGGCAGGAGGAC GTGCCGGAGTACGCAGCTCGCGTCGGGCATGTGCCCCTCCTGGAGAGGCT CGCCATCGATGAGGTGCTAGAGAGCGCTGCCGTGGGAGGACACATGGGCG TTCTGGAGCTGCTGGCTGAGAGGCGCTGCCCACAAGGCTGCCCCAGGGAC GAACAAGTGTCTTGGCAAGCAGCACTGGGGTCCGGCGACCAGGACAGTGA AGGTGGCAAGCATATGGAGGTGCTGCAGTATTTGCTGCAAGAGCAGTGCC CGTGGGACGTGCGAAGTGTGCTCCTCGCAGCTGCTTCAGCGGGCAACGTG GAAATGCTGCAATTCCTGCGCGAACACAACGGGGGCGAGCTGTGGGACCA GGAACTGGCAGGGGAAATGCTCTGTGATGCGGCGTGCTGGGACCATCTCG AGGCAACCAAGTGGCTCCGCACTGAAGCAAATGCTCCGTGGCCCAGTCAG CTGTGGTTCGAAGATGGCGTCAAGGAGTACAGAGCAGATGCGGCAGAGCT GAGTGACGATATTTCCATGTATGACAAAGATTTCACGAAGGATTCAGAGC CACTCAGTCAGATCGAGGAAACGGGAAGTGACTCGGAAACGGAAAGTGAC TCGGAAACGGAAAGTTTCTCGCATGCTGCTGATGCTGACGATGCTGAGTC ACGGCGCATGCAGTGCCCATGGTGGGCCCTCGAGCCACTCAAGTGGGCGG TATCTGAGGGGTGTCCCCTAGGTGAGTGGCCTGAAGAGGTGCTGAAAGTG GTCCAAGCTGTTGACCCGGAGGTAGGGGACTGGGTCAAGCAGCAGCTGCA GCAGGGGGAAGAGCCCGCCAAGTCAAATGTGGGAACAGAGCACAAAGAAG AGCAGGACAGCTAG back to top
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