mRNA_16886 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353756
Unique NamemRNA_16886
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A835Z530_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z530_9STRA)

HSP 1 Score: 1437 bits (3721), Expect = 0.000e+0
Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 1
Query:    1 MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVLSSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACAERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKDVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNVEMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQLWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSXXXXXXXXXXFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKVVQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS 2211
            MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVLSSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACAERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKDVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNVEMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQLWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSXXXXXXXXXXFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKVVQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS
Sbjct:    1 MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVLSSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACAERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKDVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNVEMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQLWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSXXXXXXXXXXFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKVVQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS 737          
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A7S1VGX5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VGX5_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 1.920e-7
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 1
Query:  490 VVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWL 810
            V R+A A AR  +   A +L+     G     + +AAAAA  + S+  L+ L     P S   CA AAQAG +D L+WLR RGC WDE+ +   A A G +  L WL
Sbjct:   28 VARVADAVARGGHVSLALLLEEA---GVTWTDEHLAAAAA--SGSLPLLQHLLRGRSPRSPTLCAGAAQAGAIDCLEWLRERGCAWDES-VVTAAVAAGDLPLLRWL 128          
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A2J8A5I5_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A5I5_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.180e-5
Identity = 121/481 (25.16%), Postives = 182/481 (37.84%), Query Frame = 1
Query:  259 SGGLVGYSSFLACAERCN--ADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNKD-VLRFLQQAGYTDV------VRLACAAARYENTLAASVLDSVIRRGK----DKVPDVIAAAAAATTPSVRTLERL--------FTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAG--GSVAALTWLCEQGVG-DWSEAGTGEMLAAAGAHGRDDAVRWLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSDALRLLEKAGRGDVVQHCTQWVTEEAESGTXXXXXXXXXXXTLPEQALDAVMQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQEDVPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRDEQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLA 1629
            + G +    +LA    C+   ++  AA  AG + + RWL        G   +  +  A A Q    D +L   +  G TD+        LAC+AAR  +     ++D +++R +     +    +  AAAA    + TL+RL        F  G  L++   A +  A    K++WL G+G     +      AA    ++  LTWL  +G   DW       +  AA   G  DA+R+L +   P           + G A+A    L++LQ A+     +      AL    + G   VV     W  E    G              P   L+A   G +E L  L +R CL D     C   A C+ +  L WL+ QGC     VP      GH         D+   +AA+      L  L    CP      + + W+    SG      G  +  L  LL+  CP D R  + A
Sbjct: 1762 ASGCLENLQWLAAHVGCSLTGEVFEAAAAAGRLDVCRWLQQQGCYGQGWALSGAKAAAGAGQRALVDWILANARDPGCTDLDGVKHSTSLACSAARGGHV---GLMDWLLQRHELERDRRAAATLLVAAAAEGCDLPTLQRLCHIYPQVAFGLGRVLTS--AAGSPTADWTSKVEWLEGQGAAASPSYDACTRAASRPDALDRLTWLRGRGYRWDWP------VTEAAAVAGNLDALRYLLAEGCPLV--------DSTGVAAARAGQLASLQ-ALHAHSGSSTLRDLALACAARGGHLPVVA----WWLERRLVGIARLRQ-------FPTLLLEAAKSGSVELLAWLRDRGCLWDEDSFHCAAWAGCEAA--LEWLVAQGCP----VP---GPYGHR--------DDPYLTAALKEDWSTLACLRRLGCPW-----QPLDWEGGTFSGAVGQ--GCSVPALHRLLELGCPVDWRRTIEA 2187          
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Match: A0A2J7ZI88_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZI88_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 2.720e-5
Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  589 VIAAAAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWDEARICMDAAAGGSVAALTWLCEQG--VGDWSE 840
            V+ AAAA   P+V  L     AG  L+    AAAA+AG ++ L WLR R CPWDE    M  AA  S   L WL EQG  VGD SE
Sbjct:   28 VMRAAAAGHLPAVAWLVERLGAGAALTIHVFAAAARAGSMELLGWLRARDCPWDE----MVFAAARSEQ-LEWLVEQGCLVGDDSE 108          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353756 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z530_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1VGX5_9EUKA1.920e-740.19Hypothetical protein (Fragment) n=1 Tax=Sexangular... [more]
A0A2J8A5I5_9CHLO1.180e-525.16Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]
A0A2J7ZI88_9CHLO2.720e-548.84Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_182contigContig_182:122721..132543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353756|estExt_Genemark1.C_Ctg_1820020
Hectar predicted targeting categoryother localisation
TranscriptId354078
TrackFilteredModels1
ProteinId353756
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353756gene_16886Tribonema minus UTEX_B_3156 geneContig_182 122721..132543 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353756Trimin1|353756|estExt_Genemark1.C_Ctg_1820020Tribonema minus UTEX_B_3156 polypeptideContig_182 122864..132543 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16886_9exon_16886_9Tribonema minus UTEX_B_3156 exonContig_182 122721..123438 -
exon_16886_8exon_16886_8Tribonema minus UTEX_B_3156 exonContig_182 124002..124088 -
exon_16886_7exon_16886_7Tribonema minus UTEX_B_3156 exonContig_182 125605..125672 -
exon_16886_6exon_16886_6Tribonema minus UTEX_B_3156 exonContig_182 126613..126658 -
exon_16886_5exon_16886_5Tribonema minus UTEX_B_3156 exonContig_182 127625..127656 -
exon_16886_4exon_16886_4Tribonema minus UTEX_B_3156 exonContig_182 128193..128713 -
exon_16886_3exon_16886_3Tribonema minus UTEX_B_3156 exonContig_182 129904..130444 -
exon_16886_2exon_16886_2Tribonema minus UTEX_B_3156 exonContig_182 131547..131731 -
exon_16886_1exon_16886_1Tribonema minus UTEX_B_3156 exonContig_182 132385..132543 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_16886UTR3_16886Tribonema minus UTEX_B_3156 three_prime_UTRContig_182 122721..122863 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16886CDS_16886Tribonema minus UTEX_B_3156 CDSContig_182 132385..132543 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16886 ID=mRNA_16886|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2357bp|location=Sequence derived from alignment at Contig_182:122721..132543- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCAGCAGGCGCGGCCGCAGGGCCTGACCCAGGCTGACATGCTGGC
GATCATTCACGCCAATGCCGCGTTGGGCCGATTCCTCAATGTCAAGGCCC
TTTGGATGAGGGCCACACGAGAGCATGGCATCAATGCCACTGCGGTGCTG
TCTTCAGAGGTTCTGGGCATACTCGCGCGGCACGGAGAGTGGGACCATGC
TGTGCTCGTGCTGTCAAAGTTGTTGGAGGCGGGCGTCTCTCCACTCATCA
AGCAGGGCTCGGGCGGGCTGGTGGGCTACAGCTCGTTCCTGGCGTGCGCC
GAGCGCTGCAACGCGGACATATCGCGAGCCGCTATCAAAGCAGGGAGCGT
CAAGATCACGCGCTGGCTGCACGACACGGAGCTCCTGAGCGCTGGGGAGG
GGCGCGCCAAGGGCGAGCTGGGCGCGCTCGCGGTGCAGCACGGCAACAAG
GACGTGCTGCGCTTCCTGCAGCAGGCGGGCTACACGGACGTCGTGCGCCT
CGCGTGCGCCGCCGCGCGCTACGAGAACACCCTGGCCGCCTCCGTCCTGG
ACTCCGTCATCAGGAGGGGCAAGGACAAGGTGCCCGACGTCATCGCGGCG
GCCGCTGCGGCGACCACCCCCTCTGTGAGGACCCTGGAGCGGCTGTTTAC
CGCGGGGTATCCGCTGAGCACGGAGGCGTGCGCGGCGGCGGCGCAGGCGG
GGCAGCTCGACAAGCTGCAGTGGCTGCGGGGCAGGGGGTGCCCGTGGGAT
GAGGCGCGGATCTGCATGGATGCCGCGGCGGGAGGCTCAGTGGCCGCGCT
GACGTGGCTCTGCGAGCAGGGGGTGGGGGACTGGTCGGAGGCGGGCACGG
GGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGACGACGCCGTCAGG
TGGCTGCGCTCGCGAGACCCCCCTGCCCCCTGGCCGCAAGCCGGACTCTG
GTGGTACACAGACGGTGGCGCCAGTGCGGACTGCTGGCCCCTCAGCACCC
TCCAGTTGGCGATCAGTGAGGGCTGCCCGGCAGGGGACTGGTCCAGCGAC
GCGCTCCGCCTTCTGGAGAAGGCCGGCAGGGGCGATGTGGTGCAGCACTG
CACGCAGTGGGTGACGGAGGAAGCTGAGTCGGGAACTGAGTCGGACAGTG
AGTCGGAAAGTGAGCCGAAGACCCTGCCCGAGCAGGCGCTGGACGCGGTG
ATGCAGGGAGACTTGGAGGCGCTGCAAAACCTGGCGGAGAGGGAGTGCCT
GGAGGATCCCCGCGGGGAGCTGTGCACTGTTGCCGCGTCCTGTGACCATT
CGGACGTGCTGCTATGGCTGCTGGAGCAGGGCTGCAAGTGGCAGGAGGAC
GTGCCGGAGTACGCAGCTCGCGTCGGGCATGTGCCCCTCCTGGAGAGGCT
CGCCATCGATGAGGTGCTAGAGAGCGCTGCCGTGGGAGGACACATGGGCG
TTCTGGAGCTGCTGGCTGAGAGGCGCTGCCCACAAGGCTGCCCCAGGGAC
GAACAAGTGTCTTGGCAAGCAGCACTGGGGTCCGGCGACCAGGACAGTGA
AGGTGGCAAGCATATGGAGGTGCTGCAGTATTTGCTGCAAGAGCAGTGCC
CGTGGGACGTGCGAAGTGTGCTCCTCGCAGCTGCTTCAGCGGGCAACGTG
GAAATGCTGCAATTCCTGCGCGAACACAACGGGGGCGAGCTGTGGGACCA
GGAACTGGCAGGGGAAATGCTCTGTGATGCGGCGTGCTGGGACCATCTCG
AGGCAACCAAGTGGCTCCGCACTGAAGCAAATGCTCCGTGGCCCAGTCAG
CTGTGGTTCGAAGATGGCGTCAAGGAGTACAGAGCAGATGCGGCAGAGCT
GAGTGACGATATTTCCATGTATGACAAAGATTTCACGAAGGATTCAGAGC
CACTCAGTCAGATCGAGGAAACGGGAAGTGACTCGGAAACGGAAAGTGAC
TCGGAAACGGAAAGTTTCTCGCATGCTGCTGATGCTGACGATGCTGAGTC
ACGGCGCATGCAGTGCCCATGGTGGGCCCTCGAGCCACTCAAGTGGGCGG
TATCTGAGGGGTGTCCCCTAGGTGAGTGGCCTGAAGAGGTGCTGAAAGTG
GTCCAAGCTGTTGACCCGGAGGTAGGGGACTGGGTCAAGCAGCAGCTGCA
GCAGGGGGAAGAGCCCGCCAAGTCAAATGTGGGAACAGAGCACAAAGAAG
AGCAGGACAGCTAGGAGACAGAGTTGTGACACGACTGAGAGTATGTCGAG
CATAGGTTTCACATAGCAGATGTGTGCTGAGGGTCCGAAGGCAAGGCGGG
GCGCCGAATGACATTGCTCGCTGCCACTTGATGGCAAAAAAATACACATA
AAGCTGC
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protein sequence of jgi.p|Trimin1|353756

>Trimin1|353756|estExt_Genemark1.C_Ctg_1820020 ID=Trimin1|353756|estExt_Genemark1.C_Ctg_1820020|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=738bp
MAQQARPQGLTQADMLAIIHANAALGRFLNVKALWMRATREHGINATAVL
SSEVLGILARHGEWDHAVLVLSKLLEAGVSPLIKQGSGGLVGYSSFLACA
ERCNADISRAAIKAGSVKITRWLHDTELLSAGEGRAKGELGALAVQHGNK
DVLRFLQQAGYTDVVRLACAAARYENTLAASVLDSVIRRGKDKVPDVIAA
AAAATTPSVRTLERLFTAGYPLSTEACAAAAQAGQLDKLQWLRGRGCPWD
EARICMDAAAGGSVAALTWLCEQGVGDWSEAGTGEMLAAAGAHGRDDAVR
WLRSRDPPAPWPQAGLWWYTDGGASADCWPLSTLQLAISEGCPAGDWSSD
ALRLLEKAGRGDVVQHCTQWVTEEAESGTESDSESESEPKTLPEQALDAV
MQGDLEALQNLAERECLEDPRGELCTVAASCDHSDVLLWLLEQGCKWQED
VPEYAARVGHVPLLERLAIDEVLESAAVGGHMGVLELLAERRCPQGCPRD
EQVSWQAALGSGDQDSEGGKHMEVLQYLLQEQCPWDVRSVLLAAASAGNV
EMLQFLREHNGGELWDQELAGEMLCDAACWDHLEATKWLRTEANAPWPSQ
LWFEDGVKEYRADAAELSDDISMYDKDFTKDSEPLSQIEETGSDSETESD
SETESFSHAADADDAESRRMQCPWWALEPLKWAVSEGCPLGEWPEEVLKV
VQAVDPEVGDWVKQQLQQGEEPAKSNVGTEHKEEQDS*
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mRNA from alignment at Contig_182:122721..132543-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16886 ID=mRNA_16886|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9823bp|location=Sequence derived from alignment at Contig_182:122721..132543- (Tribonema minus UTEX_B_3156 )
ATGGCTCAGCAGGCGCGGCCGCAGGGCCTGACCCAGGCTGACATGCTGGC GATCATTCACGCCAATGCCGCGTTGGGCCGATTCCTCAATGTCAAGGCCC TTTGGATGAGGGCCACACGAGAGCATGGCATCAATGCCACTGCGGTGCTG TCTTCAGAGGTATGTAGGTATGCTAGTGCCTAGGGTTAGGGTCAGAGTTG GGGTCAGGACCGCGTTTCAATAGCTTGTGTTGCCTGCACATCGATCGCTG ATCAGAGACAACAATGCGTGGCACCAATGGATCGTTGTGATGTGTCATGA CATGTTATGCAATGAGATTTGCATGAGTAACGGTGCTGTATGACGATGGC AGCCGGTTGGCTCTACTTGCCTCCCGCCGCGGTGATGACACAGCTTTGCA CGTCAGTATGACACACCAACGTCCACAGCATTGAGCGACGTGCCCAGAAA GCAGCGCTGGCTTAAAAGTGTATTGCCCATGCTGTTGAGATCATTGCCCT GCAAGACACCTCTCGTGCCCTTACTCTGCAGCTGTGTCAGTAGGGCGACT CTCCTGGCCATACAATCTATCAAGCTGGCACAAAAACCTCCAATCCCTTC CAAGTTGTCACATGTTCCGGTTGCCTGCAACCAGGAAAGGCGTGTCACTG CGTAACATGGTCATCTGTCGGCTCACCATACTGCACTGCGTTGAGGGGTG TAAACTGCCCTTAGCCCGCCACTCACTTCGCAGCCTTCACCTCGGACCTT TCTGCCACCTTCCACCTTCACCCACCTGCCTCACAATCTCTGCCCCTGGC GGCGCACGACAGGTTCTGGGCATACTCGCGCGGCACGGAGAGTGGGACCA TGCTGTGCTCGTGCTGTCAAAGTTGTTGGAGGCGGGCGTCTCTCCACTCA TCAAGCAGGGCTCGGGCGGGCTGGTGGGCTACAGCTCGTTCCTGGCGTGC GCCGAGCGCTGCAACGCGGACATATCGCGAGCCGCTATCAAAGCAGGGTA TGTATAGTAGTACTATGTATGTATGTGTGGATGTGCTGGTCACGCACATG AGGTTTTGTGTGTGTCGTAGCGCCCTGAAAGTTGTTTGTGGTCCAGTCTG GTACTGCACTGTGTGGAACTAATCGTGTACTTGCACACAACTTCAAGGCT CAGGGGCCCTGGACCCCACTACACACACCCTATTTTCCGCAGCCTTTGAC CACTTTGGCGCTATGTCACGCGACACCCAAGCGCTGCTACACGCACTCGC CGAGCAGAGCTCGCAGGGCAGCTACAATCTCGCGCAGCGCGTTGCCTTCT GGCGCCGCCGCGCCTCCCTCGCGCTACAGCGCGCGCTCACACGTGTCGTG ATCGACAACTGGAACGCAGTCATTGCCCCTGATGGCGACGTCAGTGCTTA CCGCCGCATCGCACTGTTGCAAGTGCCGCGGCCCTCGCCGGCCAGCGCCG AACCGCCGGCCCCTCCGTAGATTTAGTTATCGCCCGATTATCGTGTGCTC AACCCCCATGCGGTCCAGGACATAATATACAACTTCAAGGCCAATGATTG ATATTGGCTGGTAGGCACTTCTGCTTTCACTGGCAACATACCGACATTGC TTCCAGAGCGGTGTCAAGGGCAATCCGTCAGAGATGTTGGTGACAAAGCA TAGCAGTGCGTGGCAGGAGCTGACCTCATCTCATATGTCTTGACAAAGTA TGTCGACACTGCTCAACAGTACCCACCCAAGCATGCATGCTCCATTCATT GGTGGTTGTGCCCATCTACCTGGACATGAACCAATGTGCCGGGTAGGCAA GAGCGAGGGCCAGCAGTGCTGCGCGCAATGTTGCGGTGCTTAGCATTAGC ATTAACCTCGAGCTCCAGCATTGGTGCTAGCAGTCAGCAGTGTCGTGCTC ACGCTCACCGGCATGCTGAACACTGACGCGGCACATTTGCGCTCACGTGG CATGCTCAGTAGCGCATCAGTGATCCACACGTGCGTGTGTACCTCTAGCC CTAAGGATCGTTGTCAGCATCTCTCACCGCAGCTAGCTAACCCTAGCTAG GACTGCCACTCATCCCCCCCCCAACCCTAACCCTAACCCTGATACGCAGG AGCGTCAAGATCACGCGCTGGCTGCACGACACGGAGCTCCTGAGCGCTGG GGAGGGGCGCGCCAAGGGCGAGCTGGGCGCGCTCGCGGTGCAGCACGGCA ACAAGGACGTGCTGCGCTTCCTGCAGCAGGCGGGCTACACGGACGTCGTG CGCCTCGCGTGCGCCGCCGCGCGCTACGAGAACACCCTGGCCGCCTCCGT CCTGGACTCCGTCATCAGGAGGGGCAAGGACAAGGTGCCCGACGTCATCG CGGCGGCCGCTGCGGCGACCACCCCCTCTGTGAGGACCCTGGAGCGGCTG TTTACCGCGGGGTATCCGCTGAGCACGGAGGCGTGCGCGGCGGCGGCGCA GGCGGGGCAGCTCGACAAGCTGCAGTGGCTGCGGGGCAGGGGGTGCCCGT GGGATGAGGCGCGGATCTGCATGGATGCCGCGGCGGGAGGCTCAGTGGCC GCGCTGACGTGGCTCTGCGAGCAGGGGGTGGGGGACTGGTCGGAGGCGGG CACGGGGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGTCAGTGGTG CTTAACCCGAACCCTAACCCTAACCTAACCCTAACCTATTGGCGGGTACG GGGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGTCAGTGGTGCATT GCAGTGGTGCATTGCTGGGATGCGGTTGAAGTGAGCTCGTGGCGTGTCCT TGCTGTGCTAGGGTTTAGACGAGGAAAGGGATGAAGCTGTGGTATAGGTA TGAGCCTGCCACCTTTGCGATCGGCACGAAACGCATGTGTCGCGATGGCG GGTGTGTGTGTGTGTGCTCATCGCTGGTCGCTGCGGTTGGTATGTATGTA TGCAACGCCGTGAGCGCTGTCGCTGCTTCCTCGAGCACTGCTGTGGTGCA TGGGGCAGTGGATGTGCGGCGCAGGCGTGCAGCGCAAAGAGTACCTTGAA GTGTCATTCGAATTGGAGATACAGGCCTATAATTGTAAGAAAGGGAGTGC ACCGAGTGCTGATGTTACCATTAAGGCAAGGTCATGATACGCAGCTGTGT CAGGTCCCCGGAGCCTGGTGTTCGAGTGTTGAACTTGAAGTTCATGTGAA ACTGCACGTAGAGCTTGGTACGTGCCCCTGAAGTACAGACTAGCATGTGA CCTTGAAGTGTGGGAAGCGTATTTGTAGTGCATGCCCCCCTTGACTTGCA TGCGTGCTCATGTCATGCCATCGTGGTGGTTGTTGGAGCTTCGATGCCAA TCTGGACCTTTGTTGTACTGCATGAGGTCAACAATAACACTGCTCTGTAT CAGGCCAACAACACAATTCGGGCAGTGTATCAAGCTGGCGGTGGCTCAAA GGTCAATCACAAGTGCAAGCAGCGTCAAAGTGTGTGCGGGAGCGGCACAC AGGACTTGAACATCACCATGCAGCAGCACCAACAACTTGATCCGCACATG AGGAGCCAACATCCGATCACCAAGAGGGCAGTACTAATGTGTACTTCTTT CCTTGGTGTGTTAGGTGTGTTAGAATGGACAGACTCCTGGTTATCATGCA CGAGACGCCTTACAGTAGTACATTTATGTGCCACTGTATCTCATAGGGAC GGTTACAAACAAGTTACAGCCACGCAGCGTACCGGTTATTGTTGTATCAT CGCACTTTCAACAGCAACAGCAGTAGTCACGACTGATCACTGCCCCTGCC GCTCCCCCTACCCTGCCCGCGATTTCACAGGACGACGCCGTCAGGTGGCT GCGCTCGCGAGACCCCCCTGCCCCCTGGCCGCAAGCCGGACTCTGGTGGT ACACAGACGGTGGCGCCAGTGCGGACTGCTGGCCCCTCAGCACCCTCCAG TTGGCGATCAGTGAGGGCTGCCCGGCAGGGGACTGGTCCAGCGACGCGCT CCGCCTTCTGGAGAAGGCCGGCAGGGGCGATGTGGTGCAGCACTGCACGC AGTGGGTGACGGAGGAAGCTGAGTCGGGAACTGAGTCGGACAGTGAGTCG GAAAGTGAGCCGAAGACCCTGCCCGAGCAGGCGCTGGACGCGGTGATGCA GGGAGACTTGGAGGCGCTGCAAAACCTGGCGGAGAGGGAGTGCCTGGAGG ATCCCCGCGGGGAGCTGTGCACTGTTGCCGCGTCCTGTGACCATTCGGAC GTGCTGCTATGGCTGCTGGAGCAGGGCTGCAAGTGGCAGGAGGACGTGCC GGAGTACGCAGCTCGCGTCGGGCATGTGCCCCTCCTGGAGAGGCTCGCCA TGTGAGTGTGTACTGCTGATGCACTTTCAGCAGCAGTACTCGCAGCTGAC CGCGCATACGCATACATCTCAAGTACTCACGTGTGCATGTATGTATGTAC GTGCTCCGACGTACTGGTACATTCACCACTCGACATGCTGTAAGAGTAAG CACGCTTGCGCACGTGATGCCATGGCACCACTTGCCGAGCCACATCAAAC AATACTTTGAAATGAAGTGTACATCATGCGCCCATGGTCTGTAGGTGGCA GTGGCTAACCCAAGGGGTGACACACAGACCTGAAAGCGATGCTCAACCGT GCACCAACATGCACGGACAGTAGCCATGTATGGCTTTGTGATTTTTATTT TCAGTGCCTTGCATGTGAACTACTGTACAGAATCGTGACAAGTATGTGAT CTTTGCCATGTTATATATTGCACACCTGCCCGCCGCAGCCAAGGGTGCAA ATGGACCCCTGAGATTGCTGGTTGTGCTGCGCGGCACGGGCACGTGAAAG CACTGACTTGGCTCCTTCAGCGCGACTGTCCGCTGAGCGATGAGGTGCTA GAGAGCGCTGCCGTGGGAGGTGAGCAGGCGCCCTAATGTATGTATGCATG TGCAGACAGGCAACACTGGGGGTCAGTATCTCAACGGTTTCCGCTCATGA TCAGGGTTAGGAGCAGGGCAAAGGTTAAGGTCAGGCGTGTGTGGTGTGAC CAGCCTGGGTTGCTGGTGTATACGCATGCTGTGCTGCGATTGCGCAGCTG CTGTTAAACACCTTAGGGTCAGGTGGTTTTGCTCACTTGACTCTGCTTGC AAGAGGAGTGGCACAGGACTGCATGTAAAAGTATGTATTGTTTGTGTAGT TGCACTGGTGGCTGTGCTTGGCCACTGGTGTATGTTGTGACGCATCATCA TGATGACTCCATCTATTGCTTCAAGTCAGGACCATGGCACTTCAATTGTC ACTATAACCCTGAGCAACCTGTAGACATTGCCTATCCCCCCCCTCTGTCT AGTAGACAGAGGGGGGGGGTCCACAGTTACATTCTGAGCGCAGCGCAAAG CAACATGTTGCTGGATATCGGCAATTTTTTAGCTTGTCGGCAATTTGATC TCTGCATCAGAAACATACACCGATACAACGGTGCAACAATGCAGAGCGGT GACTCTTGCGAATCTGAAGCAGCATGTACTATTCCTGTGCTCTCACGTTC ACACGTGCGGTGTCCCAGTTGCAATTGGTAGCACTGCCGACTGCTCTTTT GCTGCAATCAACGGCCGCGTTGTATGTGGCAATGGACAGGCATGTGCAGA CACTTGACCAGGCTGCGCAGAGATGGCAGTTATCAGAGCTCAGCGATGAC AGCTAGCATGTATTTCTGCATGTTTGCACAGTATGTAAGACAGCAAGGTT GAACTGTCGCACACTCTTGCCTACCCGCTGTGGTGTGTTGATTGCCAGGC GGCTGTTGTCATTGAGTGCTTGGTGTTCGTCATCATTCACAGTTGAAGTA CGACCACTTGGTGTCCCCCTTTCCTTCCCCTGCAGGACACATGGGCGTTC TGGAGCTGCTGGCTGAGAGGCGCTGCCCACAGTCTGTCAAAGCAACCAGA GCCGCTGCCTACAATGGTAAGCCTGATGCCGCTGTGAGTGCATGTTGCTC TTCAAGTTGTGTTCCACAAGTTTGGGTGTCGGCAGGTGCCGCAGTGCAAC CATCACCATTGAGGATCCTGTGCTGCCAAGTGCACACACCGCACAGCTGC ATTGGTGTGTGACTTGCGTGAGCCCGAGCCCAATCAGCGGCAAAATGTGA GGCAATTGACCAGAGCCAAGTTCATAGCTAGATGTGATGCACTCACCCTG TTGTCCCAGGAACTGCCCCAAATGCACAAATGGCCTGCTGTACCCTTTGA CCCAGCCAGCCATAAAGTGTGTTGCATTGCATCGAGGGCGCTGGCATTGT TTGCAGTTGGTGCACAACGCTCCCGCTACAGTGTTCGGTTTGCATATGCT GCTTCAAATGTCTTGATGCCATGCAACAAGAGACATGTGCTGCACCAACA GGTGTCTCTGGCAGACCCAATACTGTGCTGCCAAGCAACTTATCCTCCAC ATGCGGCAGTACTCTTGTTGCACCAAATGAGATTGCAGCATGTACCTTGA CACAAGCATTGAGCACTCAATCACATGTTTGTGTTGCCACATGGAGGGAG GCACATACACTGTGCCTCTTCACATGTATGTTTGTACGCAGACTGCATCC GGCAGACACGCTACCATGTAGGTCGCTTGCCACAAAAATGTTGTTTTACG TAATTACTTGGTTGTAATTCGTATTTCAGTGTCTTTTAGTTCTCTGGTAT GATTTTTCCTTAAAAAACAACAACGACGCCTTTGCCTATCTATGATAGCA CCCCTCCTTTCGAAGTTCCGCTTTCTTTTATATCCTCAAGGTCCTCTGTA AAACGAAGATTTTCTTTTGTGCTCTGCATGCTGTTAGGGCACCTTCAGGC TCTGCAGTTCTTGCGCGACAGAGGCTGCCCCAGGGACGAACAAGTGTCTT GGCAAGCAGCACTGGGGTCCGGCGACCAGGACAGTGAAGGTCAGTGTGCA TGTACGTATCGCAGTAGCTCACAGGCTGAGAGCTTGCACATGCGTGGTTT TGTAAACGGTCGACTAAGGATCAGCGTCCAAAAACATTATGCACGTGCAT TGACGCACCTATATGATTATATGACACTCCAAACCAAGCAAAGTATGTAG ACATAATCTGTGACAAAGGAGAGTCCAGTGCGCATTGATAAACGACTGAG GGGCGCATGGGAGACGCAGCTGTTTTTGGGCTATTCACCGCACTTGACCA TTGTCTGAATGTGATGATGATCATGCAACCGTCGGTGGCCGGTGAAGTGC AATGGACGTTGCAGGGCAGGTTTCTGCCTTTGTCAATGTGCGTGCCGGAA TACCTTTGAACTACATGCATACATACCTCTGCGTGCATTCTTGCCATTTG TTGAGGCGAATTGGTTGATCAGCCTACAGGTGGACCCCTTAAGTGGGTGC GCACAGGTTCCGGAACCGATCTTTCATCACACACGGCAGAGCCCTTGCAA GCTGAGTCATGTCACACTTGAAGGTGACCAACGACTCAAAGCCCTTATGG CAGAGACCTGTGCTGGCTGAGTTGTGTCGAATTAACTTGTTAGATCAGAG GCGCTGTCGGGATGGGCCACTGAGTCACTGAGTGACTCTGAGTCACTGAG TGACTCTGTGTCACTGACGCAACCTGCATGACTCATTGTCGGGGATGGGG CCCCTGACACAACATCATAGCAGCAGGATGCCAGGGTGAGCCGAGTGATG TTGCGTTGAGATGATCCATGGCGTGAGAGGCCATTGGGGGGCATTGGCGC ATAAACATCAACGAGCGCCGGTGCATCTCTGTGCAAGAGGTTTGTTCAAC ACTTCTGAAGACTGGAGTGCAACTTGTGTTGCAACTTGCTGGCAGTATGC GGTGCCCTCCTTCCTGTAACGCTAAGTATCTGTCAACAAAAGAACTCTGG ACGAACTGTGGCTCAGCACGTGCTTTGTCAGAAATGTCAATTACAAGTTG AAGTTGTGTTTGGCACCGCTGCCTTATTTTGCTCCGGAAGGCCAATTTCT CTAGCTGTGCTTGCCACCTCTGAAAGCCAGTCAGATCTCATGAGAATTGG TTGAGCCAAAATGGTAAACCCTTCAATCTGCCGTCACAGTCAGCATCACA GTCACAATGTATATATGTGTGCAGTCTACTACACTCTCACAAGTGCCAAG CACTTGTCTTGTGGAAGTGTCAGTCAACAAATAGGCTTTGAATTGTTGCA TACGACACCTCTCCTTCAAGTAAAGGGGAGGGTACCCGATGCTGATGCTC TTTAAACTCCAATGACTCAATGGTGTCCCAGCGTGAGAAGTCTAACTCTG CATTTCGATGAAAGCACCAGTCATCTGCCTTCGGCCGCTGTCGTGATGCT GCCATATAGTCATGCTCATGTGACTCACCTTGGTTCATTCACTGAGACAT CATGTGTAAACCTCAAGTTGTGACGCTGCTGCGTTGCGGTAACGCGCATG TACAGGTGGCAAGCATATGGAGGTGCTGCAGTATTTGCTGCAAGAGCAGT GCCCGTGGGACGTGCGAAGTGTGCTCCTCGCAGCTGCTTCAGGTATGTAC TCTGTGCCAGTACAATGGTTTTGTAGTACGTTTAAAGCGTTTGAAATGCT GTGTGGCGATGTCGTTTCGCTGATGCTGGACAAACATGCACTCTCAGGTA TTTTTTGCTGATGATCTGGTGTTGGCGCCCTGATTGCGAAACGCTTGTGA ATACACCTATGATAATAGTGCAGAAACTGGCGCAATGCCGCTTGTCCATG CATGTTTGGCATACTCAAATCAAGGTGCTCTGCCCTGCGGCCAGACACTG TGATAGTGTTTTCTTTGTCATCGTGCCCACCATCTGTTGGGTGCAAAGCT TCTGAACCTGACATTGTTCAAGCGAGGTTGTATGTGCAACGGAGCAGCCA TTGATCAAGAGTGTGCCACTCCATCTGTAACGGATTTTTGCACAAATTTG TTTGACATGTCTGCATGTTGCCACTTCAGACGGGCAAATGAGCAAACAAT ACTGCCACATCAAGACTGCCATCTCCAGCGCGCACATTACACCTGCAGCA GTCCCCTGACCCCTCCCTGTGGCCGCCTGCCTGCCATGCTCTCTTGCGCT TTTAGCGGGCAACGTGGAAATGCTGCAATTCCTGCGCGAACACAACGGGG GCGAGCTGTGGGACCAGGAACTGGCAGGGGAAATGCTCTGTGATGCGGCG TGCTGGGACCATCTCGAGGCAACCAAGTGGCTCCGCACTGAAGCAAATGC TCCGTGGCCCAGTCAGCTGTGGTTCGAAGATGGCGTCAAGGAGTACAGAG CAGATGCGGCAGAGCTGAGTGACGATATTTCCATGTATGACAAAGATTTC ACGAAGGATTCAGAGCCACTCAGTCAGATCGAGGAAACGGGAAGTGACTC GGAAACGGAAAGTGACTCGGAAACGGAAAGTTTCTCGCATGCTGCTGATG CTGACGATGCTGAGTCACGGCGCATGCAGTGCCCATGGTGGGCCCTCGAG CCACTCAAGTGGGCGGTATCTGAGGGGTGTCCCCTAGGTGAGTGGCCTGA AGAGGTGCTGAAAGTGGTCCAAGCTGTTGACCCGGAGGTAGGGGACTGGG TCAAGCAGCAGCTGCAGCAGGGGGAAGAGCCCGCCAAGTCAAATGTGGGA ACAGAGCACAAAGAAGAGCAGGACAGCTAGGAGACAGAGTTGTGACACGA CTGAGAGTATGTCGAGCATAGGTTTCACATAGCAGATGTGTGCTGAGGGT CCGAAGGCAAGGCGGGGCGCCGAATGACATTGCTCGCTGCCACTTGATGG CAAAAAAATACACATAAAGCTGC
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Coding sequence (CDS) from alignment at Contig_182:122721..132543-

>mRNA_16886 ID=mRNA_16886|Name=jgi.p|Trimin1|353756|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2214bp|location=Sequence derived from alignment at Contig_182:122721..132543- (Tribonema minus UTEX_B_3156 )
ATGGCTCAGCAGGCGCGGCCGCAGGGCCTGACCCAGGCTGACATGCTGGC
GATCATTCACGCCAATGCCGCGTTGGGCCGATTCCTCAATGTCAAGGCCC
TTTGGATGAGGGCCACACGAGAGCATGGCATCAATGCCACTGCGGTGCTG
TCTTCAGAGGTTCTGGGCATACTCGCGCGGCACGGAGAGTGGGACCATGC
TGTGCTCGTGCTGTCAAAGTTGTTGGAGGCGGGCGTCTCTCCACTCATCA
AGCAGGGCTCGGGCGGGCTGGTGGGCTACAGCTCGTTCCTGGCGTGCGCC
GAGCGCTGCAACGCGGACATATCGCGAGCCGCTATCAAAGCAGGGAGCGT
CAAGATCACGCGCTGGCTGCACGACACGGAGCTCCTGAGCGCTGGGGAGG
GGCGCGCCAAGGGCGAGCTGGGCGCGCTCGCGGTGCAGCACGGCAACAAG
GACGTGCTGCGCTTCCTGCAGCAGGCGGGCTACACGGACGTCGTGCGCCT
CGCGTGCGCCGCCGCGCGCTACGAGAACACCCTGGCCGCCTCCGTCCTGG
ACTCCGTCATCAGGAGGGGCAAGGACAAGGTGCCCGACGTCATCGCGGCG
GCCGCTGCGGCGACCACCCCCTCTGTGAGGACCCTGGAGCGGCTGTTTAC
CGCGGGGTATCCGCTGAGCACGGAGGCGTGCGCGGCGGCGGCGCAGGCGG
GGCAGCTCGACAAGCTGCAGTGGCTGCGGGGCAGGGGGTGCCCGTGGGAT
GAGGCGCGGATCTGCATGGATGCCGCGGCGGGAGGCTCAGTGGCCGCGCT
GACGTGGCTCTGCGAGCAGGGGGTGGGGGACTGGTCGGAGGCGGGCACGG
GGGAGATGCTCGCTGCTGCGGGCGCGCATGGCAGGGACGACGCCGTCAGG
TGGCTGCGCTCGCGAGACCCCCCTGCCCCCTGGCCGCAAGCCGGACTCTG
GTGGTACACAGACGGTGGCGCCAGTGCGGACTGCTGGCCCCTCAGCACCC
TCCAGTTGGCGATCAGTGAGGGCTGCCCGGCAGGGGACTGGTCCAGCGAC
GCGCTCCGCCTTCTGGAGAAGGCCGGCAGGGGCGATGTGGTGCAGCACTG
CACGCAGTGGGTGACGGAGGAAGCTGAGTCGGGAACTGAGTCGGACAGTG
AGTCGGAAAGTGAGCCGAAGACCCTGCCCGAGCAGGCGCTGGACGCGGTG
ATGCAGGGAGACTTGGAGGCGCTGCAAAACCTGGCGGAGAGGGAGTGCCT
GGAGGATCCCCGCGGGGAGCTGTGCACTGTTGCCGCGTCCTGTGACCATT
CGGACGTGCTGCTATGGCTGCTGGAGCAGGGCTGCAAGTGGCAGGAGGAC
GTGCCGGAGTACGCAGCTCGCGTCGGGCATGTGCCCCTCCTGGAGAGGCT
CGCCATCGATGAGGTGCTAGAGAGCGCTGCCGTGGGAGGACACATGGGCG
TTCTGGAGCTGCTGGCTGAGAGGCGCTGCCCACAAGGCTGCCCCAGGGAC
GAACAAGTGTCTTGGCAAGCAGCACTGGGGTCCGGCGACCAGGACAGTGA
AGGTGGCAAGCATATGGAGGTGCTGCAGTATTTGCTGCAAGAGCAGTGCC
CGTGGGACGTGCGAAGTGTGCTCCTCGCAGCTGCTTCAGCGGGCAACGTG
GAAATGCTGCAATTCCTGCGCGAACACAACGGGGGCGAGCTGTGGGACCA
GGAACTGGCAGGGGAAATGCTCTGTGATGCGGCGTGCTGGGACCATCTCG
AGGCAACCAAGTGGCTCCGCACTGAAGCAAATGCTCCGTGGCCCAGTCAG
CTGTGGTTCGAAGATGGCGTCAAGGAGTACAGAGCAGATGCGGCAGAGCT
GAGTGACGATATTTCCATGTATGACAAAGATTTCACGAAGGATTCAGAGC
CACTCAGTCAGATCGAGGAAACGGGAAGTGACTCGGAAACGGAAAGTGAC
TCGGAAACGGAAAGTTTCTCGCATGCTGCTGATGCTGACGATGCTGAGTC
ACGGCGCATGCAGTGCCCATGGTGGGCCCTCGAGCCACTCAAGTGGGCGG
TATCTGAGGGGTGTCCCCTAGGTGAGTGGCCTGAAGAGGTGCTGAAAGTG
GTCCAAGCTGTTGACCCGGAGGTAGGGGACTGGGTCAAGCAGCAGCTGCA
GCAGGGGGAAGAGCCCGCCAAGTCAAATGTGGGAACAGAGCACAAAGAAG
AGCAGGACAGCTAG
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