mRNA_8913 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A836CC45_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC45_9STRA) HSP 1 Score: 324 bits (830), Expect = 5.390e-112 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 Query: 1 GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ 501 GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ Sbjct: 1 GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ 167
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: D8LGJ5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ5_ECTSI) HSP 1 Score: 124 bits (311), Expect = 8.410e-30 Identity = 74/164 (45.12%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 4 ALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALP 495 +L LHTL +SYNQL LD S L +PALRHLD SHNLL R+EP+ LP LETL++SHNRI+RIGG +A C LR + S R LSFNR+L+ L L GNP A RYRP++ C LPH+ +ID +A+P Sbjct: 1082 SLIGLHTLVLSYNQLQVLDISVLTTMPALRHLDVSHNLLCRMEPMDGRD----LPPRLETLNMSHNRISRIGG-IAQCFLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASARALSFNRSLKLLWLEGNPLARHPRYRPTLTCLLPHVRSIDSRAMP 1240
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A6H5JAS8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS8_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.860e-29 Identity = 73/164 (44.51%), Postives = 91/164 (55.49%), Query Frame = 1 Query: 4 ALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALP 495 +L LHTL +SYNQL LD S L +PALRHLD SHNLL R+EP+ LP LETL++SHNRI+RIGG + C LR + S R LSFNR+L+ L L GNP A RYRP++ C LPH+ +ID +A+P Sbjct: 1232 SLIGLHTLVLSYNQLQVLDISVLTTMPALRHLDVSHNLLCRMEPMDGRD----LPPRLETLNMSHNRISRIGG-ITQCFLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASARALSFNRSLKLLWLEGNPLARHPRYRPTLTCLLPHVRSIDSRAMP 1390
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A7S1UGE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGE6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.440e-12 Identity = 54/167 (32.34%), Postives = 72/167 (43.11%), Query Frame = 1 Query: 1 GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ 501 G AL +LN+S NQL ALD + L L +LRHLD + H R G+ C +L+ + S+ VR+LSFNR+LRSL+L G P+AA ARYRPS+ LP L ID + LP++ Sbjct: 69 GLQAALVSLNLSCNQLPALDPAVLMALHSLRHLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVHIR------GLEPCFKLKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRVSMDVRLLSFNRSLRSLILEGTPYAAQARYRPSLRSLLPGLRAIDRRVLPRR 229
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: UPI001ADDEA91 (serine/threonine-protein kinase 11-interacting protein isoform X4 n=1 Tax=Cygnus olor TaxID=8869 RepID=UPI001ADDEA91) HSP 1 Score: 70.1 bits (170), Expect = 6.430e-11 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 16 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 468 LHT+N SYN +TALD S L L ALR LD SHN + E L LE L+L++N ++++ G+ ++L + L +N L S G+E L L+HLD+ +N + + LS L+ L L GNP +R + TL HL Sbjct: 77 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCEHY-----LTTLTE-LEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHCLKKLHLEGNPLWFHQNHRSA---TLVHL 218
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: UPI001ADE705A (serine/threonine-protein kinase 11-interacting protein isoform X3 n=1 Tax=Cygnus olor TaxID=8869 RepID=UPI001ADE705A) HSP 1 Score: 70.1 bits (170), Expect = 6.460e-11 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 16 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 468 LHT+N SYN +TALD S L L ALR LD SHN + E L LE L+L++N ++++ G+ ++L + L +N L S G+E L L+HLD+ +N + + LS L+ L L GNP +R + TL HL Sbjct: 128 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCEHY-----LTTLTE-LEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHCLKKLHLEGNPLWFHQNHRSA---TLVHL 269
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A7K7KYP0_9AVES (Serine/threonine-protein kinase 11-interacting protein (Fragment) n=1 Tax=Asarcornis scutulata TaxID=75869 RepID=A0A7K7KYP0_9AVES) HSP 1 Score: 69.7 bits (169), Expect = 8.680e-11 Identity = 58/166 (34.94%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 16 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL--------VTIDHK 486 LHT+N SYN +TALD S L L ALR LD SHN + E LE L+L++N ++++ G+ ++L + L +N L S G+E L L+HLD+ +N + + LS L+ L L GNP +R + TL HL V+I H+ Sbjct: 144 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHLSPRAASSNVSISHR 299
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: U3I6T7_ANAPP (Serine/threonine-protein kinase 11-interacting protein n=7 Tax=Anatidae TaxID=8830 RepID=U3I6T7_ANAPP) HSP 1 Score: 69.7 bits (169), Expect = 8.770e-11 Identity = 58/166 (34.94%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 16 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL--------VTIDHK 486 LHT+N SYN +TALD S L L ALR LD SHN + E LE L+L++N ++++ G+ ++L + L +N L S G+E L L+HLD+ +N + + LS L+ L L GNP +R + TL HL V+I H+ Sbjct: 208 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHLSPRAASSNVSISHR 363
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: R0JFV1_ANAPL (Serine/threonine kinase 11-interacting protein (Fragment) n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=R0JFV1_ANAPL) HSP 1 Score: 69.3 bits (168), Expect = 1.180e-10 Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 16 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 468 LHT+N SYN +TALD S L L ALR LD SHN + E LE L+L++N ++++ G+ ++L + L +N L S G+E L L+HLD+ +N + + LS L+ L L GNP +R + TL HL Sbjct: 76 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHL 217
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A8C0A192_9AVES (Serine/threonine-protein kinase 11-interacting protein n=10 Tax=Anatidae TaxID=8830 RepID=A0A8C0A192_9AVES) HSP 1 Score: 69.3 bits (168), Expect = 1.200e-10 Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 16 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 468 LHT+N SYN +TALD S L L ALR LD SHN + E LE L+L++N ++++ G+ ++L + L +N L S G+E L L+HLD+ +N + + LS L+ L L GNP +R + TL HL Sbjct: 160 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHL 301 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|135353 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8913 ID=mRNA_8913|Name=jgi.p|Trimin1|135353|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=501bp|location=Sequence derived from alignment at Contig_50:431960..432460- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GGCGCGCTGCGCGCGCTGCACACGCTCAACGTCTCGTACAACCAGCTCACback to top protein sequence of jgi.p|Trimin1|135353 >Trimin1|135353|gw1.50.47.1 ID=Trimin1|135353|gw1.50.47.1|Name=jgi.p|Trimin1|135353|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=167bp GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGback to top mRNA from alignment at Contig_50:431960..432460- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8913 ID=mRNA_8913|Name=jgi.p|Trimin1|135353|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=501bp|location=Sequence derived from alignment at Contig_50:431960..432460- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_50:431960..432460- >mRNA_8913 ID=mRNA_8913|Name=jgi.p|Trimin1|135353|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=501bp|location=Sequence derived from alignment at Contig_50:431960..432460- (Tribonema minus UTEX_B_3156 )back to top |