Trimin1|135353|gw1.50.47.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|135353
Unique Name	Trimin1\|135353\|gw1.50.47.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	167

Homology

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A836CC45_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC45_9STRA)

HSP 1 Score: 324 bits (830), Expect = 5.390e-112
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0

Query:    1 GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ 167
            GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ
Sbjct:    1 GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ 167

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: D8LGJ5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ5_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 8.410e-30
Identity = 74/164 (45.12%), Postives = 92/164 (56.10%), Query Frame = 0

Query:    2 ALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALP 165
            +L  LHTL +SYNQL  LD S L  +PALRHLD SHNLL R+EP+        LP  LETL++SHNRI+RIGG +A C  LR                                 + S R LSFNR+L+ L L GNP A   RYRP++ C LPH+ +ID +A+P
Sbjct: 1082 SLIGLHTLVLSYNQLQVLDISVLTTMPALRHLDVSHNLLCRMEPMDGRD----LPPRLETLNMSHNRISRIGG-IAQCFLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASARALSFNRSLKLLWLEGNPLARHPRYRPTLTCLLPHVRSIDSRAMP 1240

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A6H5JAS8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS8_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.860e-29
Identity = 73/164 (44.51%), Postives = 91/164 (55.49%), Query Frame = 0

Query:    2 ALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALP 165
            +L  LHTL +SYNQL  LD S L  +PALRHLD SHNLL R+EP+        LP  LETL++SHNRI+RIGG +  C  LR                                 + S R LSFNR+L+ L L GNP A   RYRP++ C LPH+ +ID +A+P
Sbjct: 1232 SLIGLHTLVLSYNQLQVLDISVLTTMPALRHLDVSHNLLCRMEPMDGRD----LPPRLETLNMSHNRISRIGG-ITQCFLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASARALSFNRSLKLLWLEGNPLARHPRYRPTLTCLLPHVRSIDSRAMP 1390

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A7S1UGE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGE6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.440e-12
Identity = 54/167 (32.34%), Postives = 72/167 (43.11%), Query Frame = 0

Query:    1 GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHLVTIDHKALPQQ 167
            G   AL +LN+S NQL ALD + L  L +LRHLD                             + H R      G+  C +L+                              +  S+ VR+LSFNR+LRSL+L G P+AA ARYRPS+   LP L  ID + LP++
Sbjct:   69 GLQAALVSLNLSCNQLPALDPAVLMALHSLRHLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVHIR------GLEPCFKLKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRVSMDVRLLSFNRSLRSLILEGTPYAAQARYRPSLRSLLPGLRAIDRRVLPRR 229

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: UPI001ADDEA91 (serine/threonine-protein kinase 11-interacting protein isoform X4 n=1 Tax=Cygnus olor TaxID=8869 RepID=UPI001ADDEA91)

HSP 1 Score: 70.1 bits (170), Expect = 6.430e-11
Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 0

Query:    6 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 156
            LHT+N SYN +TALD S L  L ALR LD SHN +   E          L   LE L+L++N ++++   G+   ++L  + L +N L S  G+E L  L+HLD+ +N +     +  LS    L+ L L GNP      +R +   TL HL
Sbjct:   77 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCEHY-----LTTLTE-LEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHCLKKLHLEGNPLWFHQNHRSA---TLVHL 218

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: UPI001ADE705A (serine/threonine-protein kinase 11-interacting protein isoform X3 n=1 Tax=Cygnus olor TaxID=8869 RepID=UPI001ADE705A)

HSP 1 Score: 70.1 bits (170), Expect = 6.460e-11
Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 0

Query:    6 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 156
            LHT+N SYN +TALD S L  L ALR LD SHN +   E          L   LE L+L++N ++++   G+   ++L  + L +N L S  G+E L  L+HLD+ +N +     +  LS    L+ L L GNP      +R +   TL HL
Sbjct:  128 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCEHY-----LTTLTE-LEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHCLKKLHLEGNPLWFHQNHRSA---TLVHL 269

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A7K7KYP0_9AVES (Serine/threonine-protein kinase 11-interacting protein (Fragment) n=1 Tax=Asarcornis scutulata TaxID=75869 RepID=A0A7K7KYP0_9AVES)

HSP 1 Score: 69.7 bits (169), Expect = 8.680e-11
Identity = 58/166 (34.94%), Postives = 84/166 (50.60%), Query Frame = 0

Query:    6 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL--------VTIDHK 162
            LHT+N SYN +TALD S L  L ALR LD SHN +   E              LE L+L++N ++++   G+   ++L  + L +N L S  G+E L  L+HLD+ +N +     +  LS    L+ L L GNP      +R +   TL HL        V+I H+
Sbjct:  144 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHLSPRAASSNVSISHR 299

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: U3I6T7_ANAPP (Serine/threonine-protein kinase 11-interacting protein n=7 Tax=Anatidae TaxID=8830 RepID=U3I6T7_ANAPP)

HSP 1 Score: 69.7 bits (169), Expect = 8.770e-11
Identity = 58/166 (34.94%), Postives = 84/166 (50.60%), Query Frame = 0

Query:    6 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL--------VTIDHK 162
            LHT+N SYN +TALD S L  L ALR LD SHN +   E              LE L+L++N ++++   G+   ++L  + L +N L S  G+E L  L+HLD+ +N +     +  LS    L+ L L GNP      +R +   TL HL        V+I H+
Sbjct:  208 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHLSPRAASSNVSISHR 363

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: R0JFV1_ANAPL (Serine/threonine kinase 11-interacting protein (Fragment) n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=R0JFV1_ANAPL)

HSP 1 Score: 69.3 bits (168), Expect = 1.180e-10
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 0

Query:    6 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 156
            LHT+N SYN +TALD S L  L ALR LD SHN +   E              LE L+L++N ++++   G+   ++L  + L +N L S  G+E L  L+HLD+ +N +     +  LS    L+ L L GNP      +R +   TL HL
Sbjct:   76 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHL 217

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BLAST of jgi.p|Trimin1|135353 vs. uniprot
Match: A0A8C0A192_9AVES (Serine/threonine-protein kinase 11-interacting protein n=10 Tax=Anatidae TaxID=8830 RepID=A0A8C0A192_9AVES)

HSP 1 Score: 69.3 bits (168), Expect = 1.200e-10
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 0

Query:    6 LHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGGAAARLPRGLETLDLSHNRIARIGG-GVAGCARLRVVRLAHNRLRSAGGLESLTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVICTLPHL 156
            LHT+N SYN +TALD S L  L ALR LD SHN +   E              LE L+L++N ++++   G+   ++L  + L +N L S  G+E L  L+HLD+ +N +     +  LS    L+ L L GNP      +R +   TL HL
Sbjct:  160 LHTVNFSYNSITALDDS-LQLLNALRVLDLSHNKVQDCE------LYLTTLTELEYLNLAYNFLSKVPNLGIFSRSKLVTLILRNNELDSINGVEQLVNLQHLDVAYNLLLEHAQLAPLSTLHYLKKLHLEGNPLWFHQNHRSA---TLVHL 301

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|135353 vs. uniprot

BLAST of jgi.p|Trimin1|135353 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CC45_9STRA	5.390e-112	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
D8LGJ5_ECTSI	8.410e-30	45.12	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JAS8_9PHAE	2.860e-29	44.51	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A7S1UGE6_9STRA	1.440e-12	32.34	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
UPI001ADDEA91	6.430e-11	36.84	serine/threonine-protein kinase 11-interacting pro...	[more]
UPI001ADE705A	6.460e-11	36.84	serine/threonine-protein kinase 11-interacting pro...	[more]
A0A7K7KYP0_9AVES	8.680e-11	34.94	Serine/threonine-protein kinase 11-interacting pro...	[more]
U3I6T7_ANAPP	8.770e-11	34.94	Serine/threonine-protein kinase 11-interacting pro...	[more]
R0JFV1_ANAPL	1.180e-10	36.18	Serine/threonine kinase 11-interacting protein (Fr...	[more]
A0A8C0A192_9AVES	1.200e-10	36.18	Serine/threonine-protein kinase 11-interacting pro...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 59..72 score: 46.62 coord: 101..114 score: 44.52
None	No IPR available	PANTHER	PTHR15454	NISCHARIN RELATED	coord: 2..160
None	No IPR available	SUPERFAMILY	52075	Outer arm dynein light chain 1	coord: 3..162
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 101..125 e-value: 24.0 score: 10.1 coord: 55..79 e-value: 43.0 score: 8.1 coord: 27..50 e-value: 4.6 score: 16.0 coord: 3..26 e-value: 0.98 score: 18.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 51..167 e-value: 2.2E-23 score: 84.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..50 e-value: 1.4E-8 score: 36.0
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 3..40 e-value: 4.3E-8 score: 32.8
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 59..69 e-value: 0.81 score: 9.9
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 58..79 score: 7.357723
IPR025875	Leucine rich repeat 4	PFAM	PF12799	LRR_4	coord: 81..114 e-value: 2.2E-6 score: 27.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_50	contig	Contig_50:431960..432460 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|135353	mRNA_8913	Tribonema minus UTEX_B_3156	mRNA	Contig_50 431960..432460 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|135353|gw1.50.47.1 ID=Trimin1|135353|gw1.50.47.1|Name=jgi.p|Trimin1|135353|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=167bp
GALRALHTLNVSYNQLTALDASALAELPALRHLDASHNLLTRVEPVGSGG
AAARLPRGLETLDLSHNRIARIGGGVAGCARLRVVRLAHNRLRSAGGLES
LTALEHLDLGHNAIAGSLSVRILSFNRALRSLVLAGNPFAAGARYRPSVI
CTLPHLVTIDHKALPQQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt
IPR025875	Leu-rich_rpt_4