mRNA_6030 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349505
Unique NamemRNA_6030
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: A0A835YRS2_9STRA (Anticodon-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS2_9STRA)

HSP 1 Score: 370 bits (950), Expect = 2.200e-127
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1
Query:   43 MDLPVGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLEAPADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAKRDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEGKRKSGHRKG 765
            MDLPVGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLEAPADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAKRDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEGKRKSGHRKG
Sbjct:    1 MDLPVGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLEAPADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAKRDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEGKRKSGHRKG 241          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: A0A835ZQ15_9STRA (Anticodon-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ15_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.300e-41
Identity = 86/181 (47.51%), Postives = 116/181 (64.09%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGN----CSMRMVNAGHLTATEVLEAPA-----DGGALGPHGRISSA--KELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQ 564
            VG RV+V     E +EG VYT D  T MLVLQC+     G      CSMRM++  H+ A  V++A A     D  A     ++ +   KEL +KE KA+R+AERA++Q+N  A+ E QA+  AL++TMDCEW  +S++++DQV++DPPY    C  L GCP  ALER+QKVLEGERRK+ Q
Sbjct:    9 VGDRVKVTLSSGEIIEGLVYTEDRMTNMLVLQCSGAAASGAGAAATCSMRMLSREHIIALLVVQAQAWDWTGDDAATFSVAKLPTVTPKELHKKEEKALREAERAMAQLNARATLEGQALCFALSKTMDCEWDNVSLIVFDQVRVDPPYTANDCKMLPGCPPAALERIQKVLEGERRKMHQ 189          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: A0A2D4BK89_PYTIN (AD domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK89_PYTIN)

HSP 1 Score: 107 bits (266), Expect = 8.530e-25
Identity = 74/169 (43.79%), Postives = 92/169 (54.44%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLE-APADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKL 558
            VGA+VRV TC +ET EG ++T+D     L+L+  PV         R+     L   EV+E AP+D     P     S  +L R E K    AERAL+ I    S EAQAIFDAL +TM C W G SI + + V I PPY P  CV  +      L RV++VLEGER KL
Sbjct:   19 VGAKVRVTTCHDETFEGVIFTLDAVANFLILEERPVD-APAKSKTRIFQMEALKKIEVVEKAPSDANLALPS---VSEDDLLRLEQKNKGIAERALASIGKGVSAEAQAIFDALNKTMPCAWEGQSIRVMEDVLIQPPYEPQNCVSAN---TQVLARVKRVLEGERNKL 180          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: H3H3B6_PHYRM (AD domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3B6_PHYRM)

HSP 1 Score: 105 bits (263), Expect = 2.240e-24
Identity = 75/174 (43.10%), Postives = 95/174 (54.60%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLE-APADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAK 573
            VGA+VRV T   ET EG ++TVD     LVL+       G     R+     L   EVLE APA      P   + S +EL+R E +    AERAL+ I    +GEAQ IFDAL +TM CEW G +I +  +V I PPY P  CV  +      L RV+KVLEGE+ KL ++ K
Sbjct:   24 VGAKVRVITSGQETFEGEIFTVDTVANFLVLE----EQDGAKSKTRIFQLEALQKVEVLEPAPAGLQLTLP---VISDEELQRMEQRNKGVAERALASIGQGVTGEAQTIFDALNKTMPCEWEGANIRVMGEVVIKPPYHPQNCVSTN---TQVLSRVKKVLEGEKSKLKKITK 187          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: D0NJK2_PHYIT (AD domain-containing protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0NJK2_PHYIT)

HSP 1 Score: 104 bits (260), Expect = 6.020e-24
Identity = 77/174 (44.25%), Postives = 94/174 (54.02%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLE-APADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAK 573
            VGA+VRV T   ET EG ++T+D     LVL+       G  C  R+     L   EVLE APA  G +     ISS  EL R E +    AERAL+ I    S EAQ IFDAL +TM CEW G +I +  +V I PPY P  CV  +      L RV+KVLEGE+ KL +  K
Sbjct:   23 VGAKVRVVTAAKETFEGVIFTLDPVANFLVLE----EQDGAKCKTRIFQLKALQKVEVLEHAPA--GLMLTLPAISS-DELLRMEQRNKVLAERALASIGQGVSSEAQVIFDALNKTMPCEWEGANIRVMGEVVIKPPYHPQNCVSAN---TQVLSRVKKVLEGEKSKLKKAKK 186          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: A0A8K1CPS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPS1_PYTOL)

HSP 1 Score: 103 bits (256), Expect = 2.210e-23
Identity = 73/175 (41.71%), Postives = 98/175 (56.00%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQ-CTPVPPVGGNCSMRMVNAGHLTATEVLEAPADGGALG-PHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAK 573
            VGA+VRV T L  TVEG ++T+D     L+L+  +   P      +  ++A  L + EV+E  A    L  PH    S  +L R E K    AERAL+ I  N S EAQAIFDAL +TM C W G +I + ++V I PPY P  CV  +      L R++KVLEGE+ KL + +K
Sbjct:   15 VGAKVRVVTSLEVTVEGVIFTLDPIANFLILEESSSETPAKSKTHIFQMDA--LKSIEVIEKAAGDANLNLPH---ISEDDLLRLEQKNKGIAERALASIGENVSAEAQAIFDALNKTMPCHWEGQNIRVMEEVLIKPPYQPQNCVSSN---TQVLSRIKKVLEGEKNKLRKASK 181          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: A0A0P1A745_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A745_PLAHL)

HSP 1 Score: 102 bits (254), Expect = 4.350e-23
Identity = 70/168 (41.67%), Postives = 92/168 (54.76%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLEAPADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKL 558
            VGA++RV T  +ET EGTV+T+D     LVL+       G      + +   L   EVLE    G  L     + SA EL+R E +    AE+AL+ I    +GEAQAIFDAL +TM C+W G +I +   V I PPY P  C+  +      L RV+KVLEGE+ KL
Sbjct:   21 VGAKIRVETNKHETFEGTVFTLDPVANFLVLE----ERDGAKLRTLIFHCNALQKVEVLEEAPSGLMLKLP--VISADELQRLEQQNKEKAEKALASIGQGVTGEAQAIFDALNKTMPCKWEGNAIRVMGDVTIKPPYHPQNCMSTNNL---VLSRVKKVLEGEKSKL 179          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: A0A5D6Y5E4_9STRA (AD domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5E4_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.260e-23
Identity = 76/174 (43.68%), Postives = 94/174 (54.02%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVL-EAPADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAK 573
            VGARVRV T  +ET EG ++TVD     L L+      VG     R+     L   EVL +APAD     P+    +  +L R E +    AERAL+ I    S EAQ IFDAL +TM CEW G +I +   V I PPY P  CV  +   A AL RV+KVLEGE+ KL +  K
Sbjct:   25 VGARVRVLTQADETFEGAIFTVDPVASFLFLEEYAADSVGKG-KTRIFQLEALKKIEVLAKAPADANVGLPN---ITEDDLLRLEQRNKSVAERALASIGKGVSTEAQTIFDALNKTMPCEWEGQTIRVMTDVVIKPPYQPQNCVSEN---AQALSRVKKVLEGEKNKLKKAKK 191          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: K3WYV9_GLOUD (AD domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYV9_GLOUD)

HSP 1 Score: 97.8 bits (242), Expect = 3.020e-21
Identity = 72/174 (41.38%), Postives = 92/174 (52.87%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMRMVNAGHLTATEVLE-APADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKLVQLAK 573
            +GA+VRV T   E  EG ++T+D     L+L+         N   RM     L   E+LE APAD  A  P     +  +L R E +    AERAL+ I  + S EAQAIFDAL +TM CEW G +I +   V I PPY P  CV         L+RV+KVLEGE+ KL +  K
Sbjct:   26 IGAKVRVLTQAAEAFEGVIFTIDPIASFLILEERFADAPAKN-KTRMFQIDALKKIELLEKAPADVNANLPS---INEDDLLRLEQRNKDIAERALASIGKDVSSEAQAIFDALNKTMPCEWEGTNIRVMGDVLIKPPYQPQNCV---STKPQVLDRVKKVLEGEKNKLKRAKK 192          
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Match: A0A3M6VNF5_9STRA (AD domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNF5_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.320e-21
Identity = 74/171 (43.27%), Postives = 93/171 (54.39%), Query Frame = 1
Query:   55 VGARVRVWTCLNETVEGTVYTVDHTTGMLVL--QCTPVPPVGG-NCSMRMVNAGHLTATEVLEAPADGGALGPHGRISSAKELERKEAKAMRDAERALSQINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRLHGCPAGALERVQKVLEGERRKL 558
            VGA+V V T   ET EG ++TVD     LVL  Q   +    G     R+     L   EVL+ PA  G       IS  ++L R E +    AERAL+ I    SGEAQAIFDAL +TM CEW G++I +  +V I PPY P +CV  +      L RV+KVLEGE+ KL
Sbjct:   23 VGAKVSVLTNSQETFEGVIFTVDPVANFLVLVDQMLTIEEQNGIKSKTRIFQLEALQKIEVLD-PAPVGLQLTLPAISE-EDLMRAEQRNKGLAERALASIGQGVSGEAQAIFDALNKTMPCEWEGVNIRVMGEVVIKPPYQPQKCVSAN---TQVLSRVKKVLEGEKIKL 188          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349505 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRS2_9STRA2.200e-127100.00Anticodon-binding domain-containing protein n=1 Ta... [more]
A0A835ZQ15_9STRA1.300e-4147.51Anticodon-binding domain-containing protein n=1 Ta... [more]
A0A2D4BK89_PYTIN8.530e-2543.79AD domain-containing protein n=1 Tax=Pythium insid... [more]
H3H3B6_PHYRM2.240e-2443.10AD domain-containing protein n=1 Tax=Phytophthora ... [more]
D0NJK2_PHYIT6.020e-2444.25AD domain-containing protein n=18 Tax=Phytophthora... [more]
A0A8K1CPS1_PYTOL2.210e-2341.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1A745_PLAHL4.350e-2341.67Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
A0A5D6Y5E4_9STRA7.260e-2343.68AD domain-containing protein n=1 Tax=Pythium brass... [more]
K3WYV9_GLOUD3.020e-2141.38AD domain-containing protein n=1 Tax=Globisporangi... [more]
A0A3M6VNF5_9STRA4.320e-2143.27AD domain-containing protein n=1 Tax=Peronospora e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_45contigContig_45:16718..19265 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349505|estExt_Genemark1.C_Ctg_450003
DescriptionAnticodon-binding domain
COG categoryS
Max annot lvl4776|Peronosporales
EggNOG OGsKOG4401@1|root,KOG4401@2759|Eukaryota,3Q8I0@4776|Peronosporales
Evalue4.67e-26
Seed ortholog4792.ETI36197
Hectar predicted targeting categoryother localisation
TranscriptId349827
TrackFilteredModels1
ProteinId349505
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349505gene_6030Tribonema minus UTEX_B_3156 geneContig_45 16718..19265 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349505Trimin1|349505|estExt_Genemark1.C_Ctg_450003Tribonema minus UTEX_B_3156 polypeptideContig_45 16760..19224 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6030_1exon_6030_1Tribonema minus UTEX_B_3156 exonContig_45 16718..17038 +
exon_6030_2exon_6030_2Tribonema minus UTEX_B_3156 exonContig_45 18081..18290 +
exon_6030_3exon_6030_3Tribonema minus UTEX_B_3156 exonContig_45 18847..18990 +
exon_6030_4exon_6030_4Tribonema minus UTEX_B_3156 exonContig_45 19132..19265 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_6030UTR5_6030Tribonema minus UTEX_B_3156 five_prime_UTRContig_45 16718..16759 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6030CDS_6030Tribonema minus UTEX_B_3156 CDSContig_45 16760..17038 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6030UTR3_6030Tribonema minus UTEX_B_3156 three_prime_UTRContig_45 19225..19265 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6030 ID=mRNA_6030|Name=jgi.p|Trimin1|349505|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=809bp|location=Sequence derived from alignment at Contig_45:16718..19265+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCGGCAGGCGTATCGACGGCATTGACAGTATTCTGGGAAGCATGGATCT
GCCTGTGGGTGCAAGAGTACGCGTCTGGACATGCCTCAACGAGACCGTCG
AGGGCACGGTCTACACTGTCGATCACACAACAGGCATGCTGGTACTGCAG
TGCACTCCAGTCCCGCCAGTGGGCGGCAACTGCAGCATGCGCATGGTGAA
TGCCGGGCATCTGACGGCTACGGAGGTGCTGGAGGCGCCTGCTGATGGGG
GCGCACTGGGTCCTCATGGCCGCATCAGCAGTGCCAAGGAGCTGGAACGA
AAGGAGGCCAAGGCTATGAGGGATGCGGAACGGGCGCTGTCGCAGATCAA
CTTCAACGCCAGCGGCGAGGCGCAGGCGATCTTTGACGCGCTGGCGCGCA
CCATGGACTGCGAGTGGCTGGGGCTCAGCATTGTCATCTACGACCAGGTG
CAGATAGACCCGCCGTACGCGCCCGCGCAGTGCGTCAGGCTGCACGGGTG
TCCGGCGGGGGCTCTGGAGCGGGTGCAGAAGGTGCTGGAAGGCGAGCGCC
GCAAGCTCGTGCAGCTGGCCAAGCGCGACAGCGCCAGCAGCGCCGCCGCC
GCAGGGGAGGCAGCCCGAGAACATCGCAGCAGCAGCAGCAGCAGCAGCGC
GCCAGTAGCAGCAGTGAAACAGCCGCTGGAGCAGCCGCAGTCGCTGCCGC
CGCCTCAGCAGCAGCAGCAGCAGCGCGCAGCCGAGGGCAAGCGGAAATCT
GGCCACAGAAAAGGCTGATTCTTGCACACCACATGCACATACACCACATA
CATAGAGAG
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protein sequence of jgi.p|Trimin1|349505

>Trimin1|349505|estExt_Genemark1.C_Ctg_450003 ID=Trimin1|349505|estExt_Genemark1.C_Ctg_450003|Name=jgi.p|Trimin1|349505|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=242bp
MDLPVGARVRVWTCLNETVEGTVYTVDHTTGMLVLQCTPVPPVGGNCSMR
MVNAGHLTATEVLEAPADGGALGPHGRISSAKELERKEAKAMRDAERALS
QINFNASGEAQAIFDALARTMDCEWLGLSIVIYDQVQIDPPYAPAQCVRL
HGCPAGALERVQKVLEGERRKLVQLAKRDSASSAAAAGEAAREHRSSSSS
SSAPVAAVKQPLEQPQSLPPPQQQQQQRAAEGKRKSGHRKG*
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mRNA from alignment at Contig_45:16718..19265+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6030 ID=mRNA_6030|Name=jgi.p|Trimin1|349505|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2548bp|location=Sequence derived from alignment at Contig_45:16718..19265+ (Tribonema minus UTEX_B_3156 )
GGCGGCAGGCGTATCGACGGCATTGACAGTATTCTGGGAAGCATGGATCT GCCTGTGGGTGCAAGAGTACGCGTCTGGACATGCCTCAACGAGACCGTCG AGGGCACGGTCTACACTGTCGATCACACAACAGGCATGCTGGTACTGCAG TGCACTCCAGTCCCGCCAGTGGGCGGCAACTGCAGCATGCGCATGGTGAA TGCCGGGCATCTGACGGCTACGGAGGTGCTGGAGGCGCCTGCTGATGGGG GCGCACTGGGTCCTCATGGCCGCATCAGCAGTGCCAAGGAGCTGGAACGA AAGGAGGCCAAGGCTATGAGGGTACGTGATCGTGATGCAGCAGCAAAAGC TCTACTATAACACAGTGAAAGTGGTTTGCTGCAGCCTGATGCAGTGTTGG TGTTGTCGCTCTGGGTGATCACGCCAGAAGTTCAGCTTCCGATCAGCAGC AAAGTGGACCAAATTCTGGATGAAGTATACGTTGGTAAGCAGCTCCACAA TTGGCTGCTGCATTGGGTTCGCGCCAGGCACACCTGCCTTCACACACAGA GGCACTTCACACCTATGCCAAGCAGCTGGGTCACTCTCATGAAAACTCTA CTGTTGTCGCGAATTGAGATCGATGTGAGTGGCACACGAAACAACCGTCC ACAAGCACTGTTCCAGATGGCACTGGGCAGCTTGATCTCACAAGTAGTCT CGACAGCACATGCCTTCACATTTCGACTGGTGTCAACTGGGCCTCAAACG GCCCTGTTCTTTGTTGATGTGTAGCACCTGAATATGGATTCATGCGGTGC ACAATAATGCACAGCAGGTGAGCTGCAGGTTCTCACGTCGCCATGACAGC TTGCGCTTGGTGCTCAGCGCCACTGTAAAGTACTGGAGTGCTGCCGCTTG TGCGGAGTTGCATTTTGGGAGACACCCATCGCCACCTGATGGCTATCTGG CACGATTGTACAGTCACGCCGTTCGAGACTGCTGACCGGCGGGTTGCTGT TACCCCGGCAAGTGACTGGCGGTGTTAACTGTTGCTCCAGTAAAGCGAGT CTGGTGGATCGGGCCTGTCCTCATCACGCACAAACTGCTGCGAATGCCAG TGTTGCGCGGCCAGCAGCGCATGCCTGCGCGCCCTCCGCCACTGTCTTCG ACACGACGCATCTTTCGCGCATGCCATGTCGGGGGCATAAGCATCAGCAA CAGCGCCCGTAAGACCCACACATCATGCAATTTCATGCGTGATGCCACAT CTTGCGAGGCGCCAAGTCCTCGGCCCACATCTGCTCTTCGTTGACCTGAA AAGAACGAACGCAATCATGACCACAGCTCGTTCTCACTGTACACATCGTT GATGTGTGCACAGGATGCGGAACGGGCGCTGTCGCAGATCAACTTCAACG CCAGCGGCGAGGCGCAGGCGATCTTTGACGCGCTGGCGCGCACCATGGAC TGCGAGTGGCTGGGGCTCAGCATTGTCATCTACGACCAGGTGCAGATAGA CCCGCCGTACGCGCCCGCGCAGTGCGTCAGGCTGCACGGGTGTCCGGCGG GGGCTCTGGAGCGGGTGCAGAAGGTGAGGAAAACCGCTCGCATTGTGGGT ACATAGGCACTTGAAGTATGTACTGTGGTCATGTGGTGGTTGGGTTCCGC GTGGAGGGGGCGCTCAACAACAGTCTGGTTGATCAGCCCATGCAGGTGGA GTTGTCCGCACACGAGGAGCTTGTGCAGTCTCAACGAGGCCTTTCTGGGG CGCGCGCTTGCTTGCACTGCAGCAGCAGCAGCAGCGCATGACCTCAAGAA TACTGAGTGATCGATCGGAGCTGCGGCTTACGCGTGGTGATCGTTGTGAA GCACACTGCGCAAGGACATTTCCTGTGGTGCTTGCACCTCTGAGCGTACA CGGTGCTGCTGTTTGCCAGGGCCGCTTTCCGAAGCGTCAGCACACATCGT TTCCACTCTGTCCGCATTTGCACAAAGCTGCAGGCACGCCTCATGTACCG GTTAAAGGAGTGTAGCAGAGACCTCATCTGCAAGGAGGCAAGGTCCCCCC TGACAGCATGGTAGGTGCACCACACCTCTGGCAGCTCCCGCTAACACCGC TGATGATCGCTGACGCGCTTTGTCACCAGGTGCTGGAAGGCGAGCGCCGC AAGCTCGTGCAGCTGGCCAAGCGCGACAGCGCCAGCAGCGCCGCCGCCGC AGGGGAGGCAGCCCGAGAACATCGCAGCAGCAGCAGCAGCAGCAGCGCGC CAGTAGCAGCAGTGAAACAGCCGGTAGCACCACCAGGGCTGCCACCGCCA CCACCGGGCCATGCAGCAGGAATGGCAGCAGCGGCAGCAGCAGCACCAGC AGCAGCAGCATCCGGAGCAGAAAGTAGTGGCCAAATTGCCGCTTCGCTGG CTCCGCCTCCACAGCTGGAGCAGCCGCAGTCGCTGCCGCCGCCTCAGCAG CAGCAGCAGCAGCGCGCAGCCGAGGGCAAGCGGAAATCTGGCCACAGAAA AGGCTGATTCTTGCACACCACATGCACATACACCACATACATAGAGAG
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Coding sequence (CDS) from alignment at Contig_45:16718..19265+

>mRNA_6030 ID=mRNA_6030|Name=jgi.p|Trimin1|349505|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=726bp|location=Sequence derived from alignment at Contig_45:16718..19265+ (Tribonema minus UTEX_B_3156 )
ATGGATCTGCCTGTGGGTGCAAGAGTACGCGTCTGGACATGCCTCAACGA
GACCGTCGAGGGCACGGTCTACACTGTCGATCACACAACAGGCATGCTGG
TACTGCAGTGCACTCCAGTCCCGCCAGTGGGCGGCAACTGCAGCATGCGC
ATGGTGAATGCCGGGCATCTGACGGCTACGGAGGTGCTGGAGGCGCCTGC
TGATGGGGGCGCACTGGGTCCTCATGGCCGCATCAGCAGTGCCAAGGAGC
TGGAACGAAAGGAGGCCAAGGCTATGAGGGATGCGGAACGGGCGCTGTCG
CAGATCAACTTCAACGCCAGCGGCGAGGCGCAGGCGATCTTTGACGCGCT
GGCGCGCACCATGGACTGCGAGTGGCTGGGGCTCAGCATTGTCATCTACG
ACCAGGTGCAGATAGACCCGCCGTACGCGCCCGCGCAGTGCGTCAGGCTG
CACGGGTGTCCGGCGGGGGCTCTGGAGCGGGTGCAGAAGGTGCTGGAAGG
CGAGCGCCGCAAGCTCGTGCAGCTGGCCAAGCGCGACAGCGCCAGCAGCG
CCGCCGCCGCAGGGGAGGCAGCCCGAGAACATCGCAGCAGCAGCAGCAGC
AGCAGCGCGCCAGTAGCAGCAGTGAAACAGCCGCTGGAGCAGCCGCAGTC
GCTGCCGCCGCCTCAGCAGCAGCAGCAGCAGCGCGCAGCCGAGGGCAAGC
GGAAATCTGGCCACAGAAAAGGCTGA
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