mRNA_11746 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A836C8C0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C0_9STRA) HSP 1 Score: 249 bits (636), Expect = 4.660e-83 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1
Query: 1 MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ 396
MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ
Sbjct: 1 MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ 132
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A836CA47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA47_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 2.360e-5 Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 1 MGETLDPS--SKRTDII----LALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIG 243
M E L PS S+R II AL+ G +IGG T++Q NL HK D+L + K+VS D++T+K+QLNM+L IG
Sbjct: 69 MVEGLHPSPVSERESIISMSVAALIVGLSIGGLGVCTVLQMANLNHKVDDLTCIV-----------KTVSSDINTVKLQLNMILAIG 144
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A835YVA8_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVA8_9STRA) HSP 1 Score: 1213 bits (3138), Expect = 0.000e+0 Identity = 688/688 (100.00%), Postives = 688/688 (100.00%), Query Frame = 1
Query: 1 MEMSPLDEDPDDDRPAGEAPARNPRLDPHNSSAASRSEDGLIAGGVSRLRRWHVNRQSRYQRMSGDAEVTNARPCGMVEPDSWYEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLEHAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQAIADEPLVKKGSFSSGTGGXXXXXXXXXXXXXXXXXSIAQDAPVSDTNSTGTSNATADPAQLVPLLHKVLQQLESVSRRLSVLEQQQHQPLQHHYATESAAHRQQQHGHNNTAAQPQATQSPERVQQQHMQSPQXXXXXXXXXXXXXXXXXXXXAAQQSHDAPLSLLFADDADQ 2064
MEMSPLDEDPDDDRPAGEAPARNPRLDPHNSSAASRSEDGLIAGGVSRLRRWHVNRQSRYQRMSGDAEVTNARPCGMVEPDSWYEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLEHAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQAIADEPLVKKGSFSSGTGGXXXXXXXXXXXXXXXXXSIAQDAPVSDTNSTGTSNATADPAQLVPLLHKVLQQLESVSRRLSVLEQQQHQPLQHHYATESAAHRQQQHGHNNTAAQPQATQSPERVQQQHMQSPQXXXXXXXXXXXXXXXXXXXXAAQQSHDAPLSLLFADDADQ
Sbjct: 1 MEMSPLDEDPDDDRPAGEAPARNPRLDPHNSSAASRSEDGLIAGGVSRLRRWHVNRQSRYQRMSGDAEVTNARPCGMVEPDSWYEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLEHAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQAIADEPLVKKGSFSSGTGGXXXXXXXXXXXXXXXXXSIAQDAPVSDTNSTGTSNATADPAQLVPLLHKVLQQLESVSRRLSVLEQQQHQPLQHHYATESAAHRQQQHGHNNTAAQPQATQSPERVQQQHMQSPQXXXXXXXXXXXXXXXXXXXXAAQQSHDAPLSLLFADDADQ 688
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A496R9D8_9SPIR (Crp/Fnr family transcriptional regulator n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A496R9D8_9SPIR) HSP 1 Score: 86.3 bits (212), Expect = 5.970e-14 Identity = 102/467 (21.84%), Postives = 207/467 (44.33%), Query Frame = 1
Query: 229 MVEPDSWYEYLGDVL----TLYVAIAVPLLVSFQHVAAMHPSDW-YVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPL----TLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVA-TMEVLEASWIYKDGLEHAGF-IATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISK--------VAFLRDNRHMHPVFVTTFAS-------LLHMRHVA-RGGEVLYVEGALSRDMWFLIKGTV-VLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQA 1545
++EP+S + D+L T+Y AI VPL+V F+ + P + +S +V ++ +LD+ ++ ST P ++IYDR+ I + Y RS+ D +A+ P+ L M R + + +++ +K+ + ++ + +V ++ + H +CGW + + L +Y + T+GYGD++ STT++ +Y I + + GA + L I ++++++A++ ++ + + E TF+ ++P +L++++ +T E+ + + VA + + V + AS +L++R V G+ + G + DM+F+ KGTV V++ G ++G F + LL+S PRTA+ A C+L + E ++L +P+ A ++ A
Sbjct: 2 IIEPESRLKKNWDMLVLIVTVYSAITVPLIVVFK----IFPKGYDLLSVSIVTLVFVLDIVINFSTAV--------------------------PGRGKLIYDRKVISKAYLRSWFIVDLIAAFPMPHMAVLRMNRLLKLL--RISRSLKRLSGPRMNPSIFRLVLLV-FWIMMAAHTISCGWIIMTGNPDGLSPFELYTRAFYWTTTTLTTIGYGDVTPSTTYQIIYVIFIEIIGAGMYGLIIGNIANLIANIDIAKAQHREKMEKLNTFLRYRNIPLDLSRKINDYFEYLWQTRRGYEESDVLKELPPSLKTWVALFLNKEIIEKVPIFEGASQEFIKETILNLRPVVFTPGDYIVTAGEVGYDMFFISKGTVDVVSADGSTTYATLSDGQFFGEIA---LLLSM--------------------PRTASIIARDYCDLYRLDKETFDRILERYPDFAATIRALA 412
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A3B3U5E7_9TELE (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3U5E7_9TELE) HSP 1 Score: 82.8 bits (203), Expect = 1.170e-12 Identity = 103/481 (21.41%), Postives = 198/481 (41.16%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSF-----QHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWIYK-----DGLEHAG------------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
+++L + T YVA+ VP V F + + +P VS+ +V++L +LD+ ++ T F +TS Q V+YD R I Y ++L D VA++P L+ +V V++ + H +K + ++ S L+ HW AC W+++ E+ + W+Y+ GL+ G + +VG+G++SA+T E++++I ML GA++ A+ +V+ I+ + + R+ H + + FI H LP L +++ + + + + LR + MH P+F + SL+ GE L +G + ++F+ G++ + +L + +G +DS+ K +I A A+T C+L I+ + ++++LRL+P
Sbjct: 229 WDWLILLATFYVAVTVPYNVCFSGGRDEGGTSRNPPS--VSDILVEILFILDIMLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLVAALPFDLLYAFNVTVVSSLVVHLLKTVRLXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYYIGRKEIESLGSSDIGWLYELAKRSGGLKMLGGGPSTRSSYVTALYFALSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVNELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 659
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A3B4AWI9_9GOBI (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4AWI9_9GOBI) HSP 1 Score: 81.3 bits (199), Expect = 3.220e-12 Identity = 76/307 (24.76%), Postives = 131/307 (42.67%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSFQHV--------AAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLI--------MGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLE---ASW-----IYKDGLEHAG----------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQV 1050
+++L + T YVAI VP V F V +A +P VS+ +V++L ++D+ ++ T F +TS Q V+YD R I Y S+L D +A++P L+ G + L + ++ S L+ HW AC W+F+ E+ +SW I K+ H G + +VG+G++SA+T E++++I ML GA++ A+ +V+ I+ + + R+ H + + FI H LP L ++V
Sbjct: 205 WDWLILLATFYVAITVPYNVCFTAVEIREDGVASARNPPT--VSDILVEILFIIDIVLNFRTTFVSTSGQ-------------------------VVYDARSICIHYVTSWLFVDLIAALPFDLLYAFNISVNFGVHLLKTVRLLXXXXXXXXXXXXXXXXAVVLTLLMSTFALLAHWMACVWYFIGRSEIESNSASSWDIGACIIKEPASHGGPSVRSSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPTALEQRV 484
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A835Y843_9CHLO (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y843_9CHLO) HSP 1 Score: 81.3 bits (199), Expect = 5.120e-12 Identity = 106/462 (22.94%), Postives = 187/462 (40.48%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVS-NCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMG-RSVWSVTNKLAHRVKQHHQKNVLFGLYNIAK-------VVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLE------------HAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFI---------WRHSLPPNLA--KQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEG-HFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLK 1536
++YL ++ LY+A+ VPL +SF + + W V+ + + L++LD+AVH TG+ T +++ D + I +RY D V+SIP I G ++ W+V L + L G I V+G L LV HWCAC WH++ V + W++ + ++ F+ +G A ER+ ++ G + A+ + +++ +VA++ ++ TR HK T W H +A K++ L S + ++ A+ P F+ A L + + G+VLY G++ +M+ + KG V L G + + G HF + + +PRP K A A C++ ++ DVQ+++R FP+ A +K
Sbjct: 189 WDYLMLMVVLYLAVFVPLTISFSRLRVL---TWVVALDWICTALMMLDVAVHFRTGYITEH-------------------------GDLVRDTKLIARRYLTGMFTFDLVSSIPFDAIAGGQTDWAVWLGLFKLLXXXXXXXXLKGSGQIGNPLAMARLVLG--LILVAHWCACFWHYLFA-AVTQWPWMFSERCPECSDASNYLLAFYSAFLLLLG-DKPDAFNNVERVIVTCILFLGTFVYAVVVGTMTLLVANMFSTSTR-HKQRSAMVTDALRYTDYLSQWHHPGTEGMAYLKELPPGLYSSLMADLFTPVLIKVQLFAYTE------PPFIRRLAEKLRLS-MYMAGDVLYEYGSVGHEMYVIWKGAVALMAPGGAMAALQCAGDHFGELGLMTAN--TPRPHK---------------------AVACKNCDIVILSRYDVQEVMRDFPDSAAIVK 587
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A4W6D1E2_LATCA (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6D1E2_LATCA) HSP 1 Score: 80.5 bits (197), Expect = 5.770e-12 Identity = 105/475 (22.11%), Postives = 192/475 (40.42%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHP-------SDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWI--------------YKDGLEHA-GFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
+++L + T YVA+ VP V F V S VS+ +V++L +LD+ ++ T F +TS Q V+YD R I Y ++L D +A++P L+ +V SV + L H +K + ++ S L+ HW AC W+F+ E+ + W+ Y L A + +VG+G++SA+T E++++I ML GA++ A+ +V+ I+ + + R+ H + + FI H LP L +++ + + + LR + MH P+F + SL+ GE L +G + ++F+ G++ + +L + +G +DS+ K +I A A+T C+L I+ + ++++LRL+P
Sbjct: 224 WDWLILLATFYVAVTVPYNVCFTVVGGRDEGSSSAPRSPPSVSDILVEILFILDIVLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNV-SVVSLLFHLLKTVXXXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRREIESPGSWDIGWLHELAKRLSTPYFLSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVSELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 649
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A8C3A112_CYCLU (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3A112_CYCLU) HSP 1 Score: 80.5 bits (197), Expect = 5.980e-12 Identity = 102/469 (21.75%), Postives = 187/469 (39.87%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSFQHV---------AAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLI--------MGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLE-ASWIYKDGLEHAGF-------------IATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
+++L + T YVA+ VP V F V A+ P VS+ +V++L +LD+ ++ T F +TS Q V+YD R I Y ++L D +A++P L+ G + L + ++ S L+ HW AC W+F+ E+ SW G F + +VG+G++SA+T E++++I ML GA++ A+ +V+ I+ + + R+ H + + FI H LP L +++ + + + + LR + MH P+F + SL+ GE L +G + ++F+ G++ + +L + +G +DS+ K +I A A+T C+L I+ + ++++LRL+P
Sbjct: 228 WDWLILLATFYVAVTVPYNVCFAVVGGRDDASSTASRSPPS--VSDILVEILFILDILLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNISVYFGVHLLKTVRLLXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRKEIESPGSWDIGTGAGGGSFGVYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVNELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 646
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A4W6D0U8_LATCA (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=2 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6D0U8_LATCA) HSP 1 Score: 80.1 bits (196), Expect = 7.750e-12 Identity = 105/483 (21.74%), Postives = 194/483 (40.17%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHP-------SDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWIYKDGLEHAGF-----------------------IATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
+++L + T YVA+ VP V F V S VS+ +V++L +LD+ ++ T F +TS Q V+YD R I Y ++L D +A++P L+ +V SV + L H +K + ++ S L+ HW AC W+F+ E+ + W+++ G GF + +VG+G++SA+T E++++I ML GA++ A+ +V+ I+ + + R+ H + + FI H LP L +++ + + + LR + MH P+F + SL+ GE L +G + ++F+ G++ + +L + +G +DS+ K +I A A+T C+L I+ + ++++LRL+P
Sbjct: 229 WDWLILLATFYVAVTVPYNVCFTVVGGRDEGSSSAPRSPPSVSDILVEILFILDIVLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNV-SVVSLLFHLLKTVXXXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRREIESPGSWDIGWLHELG---GGFGVLGGGPSMRSSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVSELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 659
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A3B3VHC2_9TELE (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3VHC2_9TELE) HSP 1 Score: 79.7 bits (195), Expect = 7.820e-12 Identity = 93/426 (21.83%), Postives = 176/426 (41.31%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSF-----QHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWIYK-----------DGLEHAG------------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTV-------VLTMAGQLLREVTA 1314
+++L + T YVA+ VP V F + + +P VS+ +V++L +LD+ ++ T F +TS Q V+YD R I Y ++L D VA++P L+ +V V++ + H +K + ++ S L+ HW AC W+++ E+ + W+Y+ GL+ G + +VG+G++SA+T E++++I ML GA++ A+ +V+ I+ + + R+ H + + FI H LP L +++ + + + + LR + MH P+F + SL+ GE L +G + ++F+ G++ VL + G+ ++ VTA
Sbjct: 115 WDWLILLATFYVAVTVPYNVCFSGGRDEGGTSRNPPS--VSDILVEILFILDIMLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLVAALPFDLLYAFNVTVVSSLVVHLLKTVRLXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYYIGRKEIESLGSSDIGWLYELAKHYGNISGSGGLKMLGGGPSTRSSYVTALYFALSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVNELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLAILGESVKRVTA 513
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A673XUC0_SALTR (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XUC0_SALTR) HSP 1 Score: 80.1 bits (196), Expect = 7.970e-12 Identity = 101/475 (21.26%), Postives = 188/475 (39.58%), Query Frame = 1
Query: 250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHP------SDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLI--------MGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEV------LEASWIYKDGLEHAG-----------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
+++L + T YVA+ VP V F V S VS+ +V++L +LD+A++ T F +TS Q V+YD R I Y ++L D +A++P L+ G + L + ++ S L+ HW AC W+F+ E+ + W+++ G G + +VG+G++SA+T E++++I ML GA++ A+ +V+ I+ + + R+ H + + FI H LP L +++ + + + LR + MH P+F + SL+ GE L +G + ++F+ G++ + +L + +G +DS+ K +I A A+T C+L I+ + ++++LRL+P
Sbjct: 222 WDWLILLATFYVAVTVPYNVCFTVVGGRDEGSSAPRSPPSVSDILVEILFMLDIALNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNVSVYFGVHLLKTVRLLXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRREIENSPNSWDIGWLHELGKRLGGGPSVRSSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVSELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 648 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11746 ID=mRNA_11746|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=480bp|location=Sequence derived from alignment at Contig_80:331751..332688- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGCGAGACGCTTGATCCCTCTTCCAAACGTACGGACATCATCCTGGCback to top protein sequence of jgi.p|Trimin1|351089 >Trimin1|351089|estExt_Genemark1.C_Ctg_800039 ID=Trimin1|351089|estExt_Genemark1.C_Ctg_800039|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISback to top mRNA from alignment at Contig_80:331751..332688- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11746 ID=mRNA_11746|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=938bp|location=Sequence derived from alignment at Contig_80:331751..332688- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_80:331751..332688- >mRNA_11746 ID=mRNA_11746|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=399bp|location=Sequence derived from alignment at Contig_80:331751..332688- (Tribonema minus UTEX_B_3156 )back to top |