Trimin1|351089|estExt_Genemark1.C_Ctg_800039 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351089
Unique Name	Trimin1\|351089\|estExt_Genemark1.C_Ctg_800039
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	133

Homology

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BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A836C8C0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C0_9STRA)

HSP 1 Score: 248 bits (633), Expect = 4.480e-83
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0

Query:    1 MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ 132
            MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ
Sbjct:    1 MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ 132

[Close]

BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A836CA47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA47_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.170e-5
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 0

Query:    1 MGETLDPS--SKRTDII----LALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIG 81
            M E L PS  S+R  II     AL+ G +IGG    T++Q  NL HK D+L   +           K+VS D++T+K+QLNM+L IG
Sbjct:   69 MVEGLHPSPVSERESIISMSVAALIVGLSIGGLGVCTVLQMANLNHKVDDLTCIV-----------KTVSSDINTVKLQLNMILAIG 144

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351089 vs. uniprot

BLAST of jgi.p|Trimin1|351089 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836C8C0_9STRA	4.480e-83	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CA47_9STRA	1.170e-5	41.38	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..132

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_80	contig	Contig_80:331832..332688 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351089	mRNA_11746	Tribonema minus UTEX_B_3156	mRNA	Contig_80 331751..332688 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351089|estExt_Genemark1.C_Ctg_800039 ID=Trimin1|351089|estExt_Genemark1.C_Ctg_800039|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp
MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTIS
ALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKA
KEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ*