mRNA_11746 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351089
Unique NamemRNA_11746
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A836C8C0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C0_9STRA)

HSP 1 Score: 249 bits (636), Expect = 4.660e-83
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1
Query:    1 MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ 396
            MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ
Sbjct:    1 MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKAKEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ 132          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A836CA47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA47_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.360e-5
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 1
Query:    1 MGETLDPS--SKRTDII----LALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTISALSDKFDTFSKSVSDDMDTLKMQLNMLLGIG 243
            M E L PS  S+R  II     AL+ G +IGG    T++Q  NL HK D+L   +           K+VS D++T+K+QLNM+L IG
Sbjct:   69 MVEGLHPSPVSERESIISMSVAALIVGLSIGGLGVCTVLQMANLNHKVDDLTCIV-----------KTVSSDINTVKLQLNMILAIG 144          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A835YVA8_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVA8_9STRA)

HSP 1 Score: 1213 bits (3138), Expect = 0.000e+0
Identity = 688/688 (100.00%), Postives = 688/688 (100.00%), Query Frame = 1
Query:    1 MEMSPLDEDPDDDRPAGEAPARNPRLDPHNSSAASRSEDGLIAGGVSRLRRWHVNRQSRYQRMSGDAEVTNARPCGMVEPDSWYEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLEHAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQAIADEPLVKKGSFSSGTGGXXXXXXXXXXXXXXXXXSIAQDAPVSDTNSTGTSNATADPAQLVPLLHKVLQQLESVSRRLSVLEQQQHQPLQHHYATESAAHRQQQHGHNNTAAQPQATQSPERVQQQHMQSPQXXXXXXXXXXXXXXXXXXXXAAQQSHDAPLSLLFADDADQ 2064
            MEMSPLDEDPDDDRPAGEAPARNPRLDPHNSSAASRSEDGLIAGGVSRLRRWHVNRQSRYQRMSGDAEVTNARPCGMVEPDSWYEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLEHAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQAIADEPLVKKGSFSSGTGGXXXXXXXXXXXXXXXXXSIAQDAPVSDTNSTGTSNATADPAQLVPLLHKVLQQLESVSRRLSVLEQQQHQPLQHHYATESAAHRQQQHGHNNTAAQPQATQSPERVQQQHMQSPQXXXXXXXXXXXXXXXXXXXXAAQQSHDAPLSLLFADDADQ
Sbjct:    1 MEMSPLDEDPDDDRPAGEAPARNPRLDPHNSSAASRSEDGLIAGGVSRLRRWHVNRQSRYQRMSGDAEVTNARPCGMVEPDSWYEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLEHAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQAIADEPLVKKGSFSSGTGGXXXXXXXXXXXXXXXXXSIAQDAPVSDTNSTGTSNATADPAQLVPLLHKVLQQLESVSRRLSVLEQQQHQPLQHHYATESAAHRQQQHGHNNTAAQPQATQSPERVQQQHMQSPQXXXXXXXXXXXXXXXXXXXXAAQQSHDAPLSLLFADDADQ 688          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A496R9D8_9SPIR (Crp/Fnr family transcriptional regulator n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A496R9D8_9SPIR)

HSP 1 Score: 86.3 bits (212), Expect = 5.970e-14
Identity = 102/467 (21.84%), Postives = 207/467 (44.33%), Query Frame = 1
Query:  229 MVEPDSWYEYLGDVL----TLYVAIAVPLLVSFQHVAAMHPSDW-YVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPL----TLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVA-TMEVLEASWIYKDGLEHAGF-IATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISK--------VAFLRDNRHMHPVFVTTFAS-------LLHMRHVA-RGGEVLYVEGALSRDMWFLIKGTV-VLTMAGQLLREVTAEGHFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLKRQA 1545
            ++EP+S  +   D+L    T+Y AI VPL+V F+    + P  +  +S  +V ++ +LD+ ++ ST                            P   ++IYDR+ I + Y RS+   D +A+ P+     L M R +  +  +++  +K+     +   ++ +  +V  ++ +  H  +CGW  +    + L    +Y          + T+GYGD++ STT++ +Y I + + GA +  L I ++++++A++  ++ +  +  E   TF+   ++P +L++++        +T    E+   + +        VA   +   +  V +   AS       +L++R V    G+ +   G +  DM+F+ KGTV V++  G       ++G F    +   LL+S                     PRTA+  A   C+L  +  E   ++L  +P+  A ++  A
Sbjct:    2 IIEPESRLKKNWDMLVLIVTVYSAITVPLIVVFK----IFPKGYDLLSVSIVTLVFVLDIVINFSTAV--------------------------PGRGKLIYDRKVISKAYLRSWFIVDLIAAFPMPHMAVLRMNRLLKLL--RISRSLKRLSGPRMNPSIFRLVLLV-FWIMMAAHTISCGWIIMTGNPDGLSPFELYTRAFYWTTTTLTTIGYGDVTPSTTYQIIYVIFIEIIGAGMYGLIIGNIANLIANIDIAKAQHREKMEKLNTFLRYRNIPLDLSRKINDYFEYLWQTRRGYEESDVLKELPPSLKTWVALFLNKEIIEKVPIFEGASQEFIKETILNLRPVVFTPGDYIVTAGEVGYDMFFISKGTVDVVSADGSTTYATLSDGQFFGEIA---LLLSM--------------------PRTASIIARDYCDLYRLDKETFDRILERYPDFAATIRALA 412          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A3B3U5E7_9TELE (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3U5E7_9TELE)

HSP 1 Score: 82.8 bits (203), Expect = 1.170e-12
Identity = 103/481 (21.41%), Postives = 198/481 (41.16%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSF-----QHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWIYK-----DGLEHAG------------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
            +++L  + T YVA+ VP  V F     +   + +P    VS+ +V++L +LD+ ++  T F +TS Q                         V+YD R I   Y  ++L  D VA++P  L+   +V  V++ + H +K                       +  ++ S   L+ HW AC W+++   E+      +  W+Y+      GL+  G                   + +VG+G++SA+T  E++++I  ML GA++ A+   +V+ I+  + + R+  H   +  + FI  H LP  L +++      +       + +  +      LR +  MH        P+F +         SL+        GE L  +G   + ++F+  G++ +     +L  +  +G    +DS+ K  +I                         A   A+T C+L  I+ + ++++LRL+P
Sbjct:  229 WDWLILLATFYVAVTVPYNVCFSGGRDEGGTSRNPPS--VSDILVEILFILDIMLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLVAALPFDLLYAFNVTVVSSLVVHLLKTVRLXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYYIGRKEIESLGSSDIGWLYELAKRSGGLKMLGGGPSTRSSYVTALYFALSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVNELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 659          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A3B4AWI9_9GOBI (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4AWI9_9GOBI)

HSP 1 Score: 81.3 bits (199), Expect = 3.220e-12
Identity = 76/307 (24.76%), Postives = 131/307 (42.67%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSFQHV--------AAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLI--------MGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLE---ASW-----IYKDGLEHAG----------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQV 1050
            +++L  + T YVAI VP  V F  V        +A +P    VS+ +V++L ++D+ ++  T F +TS Q                         V+YD R I   Y  S+L  D +A++P  L+         G  +      L                  +  ++ S   L+ HW AC W+F+   E+     +SW     I K+   H G                 + +VG+G++SA+T  E++++I  ML GA++ A+   +V+ I+  + + R+  H   +  + FI  H LP  L ++V
Sbjct:  205 WDWLILLATFYVAITVPYNVCFTAVEIREDGVASARNPPT--VSDILVEILFIIDIVLNFRTTFVSTSGQ-------------------------VVYDARSICIHYVTSWLFVDLIAALPFDLLYAFNISVNFGVHLLKTVRLLXXXXXXXXXXXXXXXXAVVLTLLMSTFALLAHWMACVWYFIGRSEIESNSASSWDIGACIIKEPASHGGPSVRSSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPTALEQRV 484          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A835Y843_9CHLO (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y843_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 5.120e-12
Identity = 106/462 (22.94%), Postives = 187/462 (40.48%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHPSDWYVS-NCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMG-RSVWSVTNKLAHRVKQHHQKNVLFGLYNIAK-------VVGSFLFLVLHWCACGWHFVATMEVLEASWIYKDGLE------------HAGFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFI---------WRHSLPPNLA--KQVRRTLNLSGETEAAQEQHAQISKVAFLRDNRHMHPVFVTTFASLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEG-HFDDADSIKRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFPNLMAPLK 1536
            ++YL  ++ LY+A+ VPL +SF  +  +    W V+ + +   L++LD+AVH  TG+ T                            +++ D + I +RY       D V+SIP   I G ++ W+V   L   +        L G   I         V+G  L LV HWCAC WH++    V +  W++ +               ++ F+  +G     A    ER+    ++  G  + A+ + +++ +VA++ ++ TR HK      T           W H     +A  K++   L  S   +       ++   A+        P F+   A  L +  +   G+VLY  G++  +M+ + KG V L   G  +  +   G HF +   +     +PRP K                     A A   C++  ++  DVQ+++R FP+  A +K
Sbjct:  189 WDYLMLMVVLYLAVFVPLTISFSRLRVL---TWVVALDWICTALMMLDVAVHFRTGYITEH-------------------------GDLVRDTKLIARRYLTGMFTFDLVSSIPFDAIAGGQTDWAVWLGLFKLLXXXXXXXXLKGSGQIGNPLAMARLVLG--LILVAHWCACFWHYLFA-AVTQWPWMFSERCPECSDASNYLLAFYSAFLLLLG-DKPDAFNNVERVIVTCILFLGTFVYAVVVGTMTLLVANMFSTSTR-HKQRSAMVTDALRYTDYLSQWHHPGTEGMAYLKELPPGLYSSLMADLFTPVLIKVQLFAYTE------PPFIRRLAEKLRLS-MYMAGDVLYEYGSVGHEMYVIWKGAVALMAPGGAMAALQCAGDHFGELGLMTAN--TPRPHK---------------------AVACKNCDIVILSRYDVQEVMRDFPDSAAIVK 587          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A4W6D1E2_LATCA (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6D1E2_LATCA)

HSP 1 Score: 80.5 bits (197), Expect = 5.770e-12
Identity = 105/475 (22.11%), Postives = 192/475 (40.42%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHP-------SDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWI--------------YKDGLEHA-GFIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
            +++L  + T YVA+ VP  V F  V            S   VS+ +V++L +LD+ ++  T F +TS Q                         V+YD R I   Y  ++L  D +A++P  L+   +V SV + L H +K                       +  ++ S   L+ HW AC W+F+   E+      +  W+              Y   L  A   + +VG+G++SA+T  E++++I  ML GA++ A+   +V+ I+  + + R+  H   +  + FI  H LP  L +++      +       +    +      LR +  MH        P+F +         SL+        GE L  +G   + ++F+  G++ +     +L  +  +G    +DS+ K  +I                         A   A+T C+L  I+ + ++++LRL+P
Sbjct:  224 WDWLILLATFYVAVTVPYNVCFTVVGGRDEGSSSAPRSPPSVSDILVEILFILDIVLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNV-SVVSLLFHLLKTVXXXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRREIESPGSWDIGWLHELAKRLSTPYFLSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVSELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 649          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A8C3A112_CYCLU (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3A112_CYCLU)

HSP 1 Score: 80.5 bits (197), Expect = 5.980e-12
Identity = 102/469 (21.75%), Postives = 187/469 (39.87%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSFQHV---------AAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLI--------MGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEVLE-ASWIYKDGLEHAGF-------------IATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
            +++L  + T YVA+ VP  V F  V         A+  P    VS+ +V++L +LD+ ++  T F +TS Q                         V+YD R I   Y  ++L  D +A++P  L+         G  +      L                  +  ++ S   L+ HW AC W+F+   E+    SW    G     F             + +VG+G++SA+T  E++++I  ML GA++ A+   +V+ I+  + + R+  H   +  + FI  H LP  L +++      +       + +  +      LR +  MH        P+F +         SL+        GE L  +G   + ++F+  G++ +     +L  +  +G    +DS+ K  +I                         A   A+T C+L  I+ + ++++LRL+P
Sbjct:  228 WDWLILLATFYVAVTVPYNVCFAVVGGRDDASSTASRSPPS--VSDILVEILFILDILLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNISVYFGVHLLKTVRLLXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRKEIESPGSWDIGTGAGGGSFGVYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVNELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 646          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A4W6D0U8_LATCA (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=2 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6D0U8_LATCA)

HSP 1 Score: 80.1 bits (196), Expect = 7.750e-12
Identity = 105/483 (21.74%), Postives = 194/483 (40.17%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHP-------SDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWIYKDGLEHAGF-----------------------IATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
            +++L  + T YVA+ VP  V F  V            S   VS+ +V++L +LD+ ++  T F +TS Q                         V+YD R I   Y  ++L  D +A++P  L+   +V SV + L H +K                       +  ++ S   L+ HW AC W+F+   E+      +  W+++ G    GF                       + +VG+G++SA+T  E++++I  ML GA++ A+   +V+ I+  + + R+  H   +  + FI  H LP  L +++      +       +    +      LR +  MH        P+F +         SL+        GE L  +G   + ++F+  G++ +     +L  +  +G    +DS+ K  +I                         A   A+T C+L  I+ + ++++LRL+P
Sbjct:  229 WDWLILLATFYVAVTVPYNVCFTVVGGRDEGSSSAPRSPPSVSDILVEILFILDIVLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNV-SVVSLLFHLLKTVXXXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRREIESPGSWDIGWLHELG---GGFGVLGGGPSMRSSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVSELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 659          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A3B3VHC2_9TELE (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3VHC2_9TELE)

HSP 1 Score: 79.7 bits (195), Expect = 7.820e-12
Identity = 93/426 (21.83%), Postives = 176/426 (41.31%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSF-----QHVAAMHPSDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLIMGRSVWSVTNKLAHRVKQHHQKNVLFGLYN----------IAKVVGSFLFLVLHWCACGWHFVATMEV-----LEASWIYK-----------DGLEHAG------------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTV-------VLTMAGQLLREVTA 1314
            +++L  + T YVA+ VP  V F     +   + +P    VS+ +V++L +LD+ ++  T F +TS Q                         V+YD R I   Y  ++L  D VA++P  L+   +V  V++ + H +K                       +  ++ S   L+ HW AC W+++   E+      +  W+Y+            GL+  G                   + +VG+G++SA+T  E++++I  ML GA++ A+   +V+ I+  + + R+  H   +  + FI  H LP  L +++      +       + +  +      LR +  MH        P+F +         SL+        GE L  +G   + ++F+  G++       VL + G+ ++ VTA
Sbjct:  115 WDWLILLATFYVAVTVPYNVCFSGGRDEGGTSRNPPS--VSDILVEILFILDIMLNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLVAALPFDLLYAFNVTVVSSLVVHLLKTVRLXXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYYIGRKEIESLGSSDIGWLYELAKHYGNISGSGGLKMLGGGPSTRSSYVTALYFALSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVNELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLAILGESVKRVTA 513          
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Match: A0A673XUC0_SALTR (Potassium voltage-gated channel, subfamily H (eag-related), member 3 n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XUC0_SALTR)

HSP 1 Score: 80.1 bits (196), Expect = 7.970e-12
Identity = 101/475 (21.26%), Postives = 188/475 (39.58%), Query Frame = 1
Query:  250 YEYLGDVLTLYVAIAVPLLVSFQHVAAMHP------SDWYVSNCVVDVLLLLDLAVHCSTGFKTTSLQRANASTAADASTASGFTAIAPTTTEVIYDRRRILQRYARSYLAADAVASIPLTLI--------MGRSVWSVTNKLAHRVKQHHQKNVLFGLYNIAKVVGSFLFLVLHWCACGWHFVATMEV------LEASWIYKDGLEHAG-----------------FIATVGYGDISASTTWERMYTIAVMLSGAVLSALAIASVSHIVASVVASRTRAHKICEHAETFIWRHSLPPNLAKQVRRTLNLSGETEAAQEQHAQISKVAF-LRDNRHMH--------PVFVTTFA------SLLHMRHVARGGEVLYVEGALSRDMWFLIKGTVVLTMAGQLLREVTAEGHFDDADSI-KRLLISPRPQKXXXXXXXXXXXXINLTPRTATATAVTPCELATITTEDVQKLLRLFP 1515
            +++L  + T YVA+ VP  V F  V           S   VS+ +V++L +LD+A++  T F +TS Q                         V+YD R I   Y  ++L  D +A++P  L+         G  +      L                  +  ++ S   L+ HW AC W+F+   E+       +  W+++ G    G                  + +VG+G++SA+T  E++++I  ML GA++ A+   +V+ I+  + + R+  H   +  + FI  H LP  L +++      +       +    +      LR +  MH        P+F +         SL+        GE L  +G   + ++F+  G++ +     +L  +  +G    +DS+ K  +I                         A   A+T C+L  I+ + ++++LRL+P
Sbjct:  222 WDWLILLATFYVAVTVPYNVCFTVVGGRDEGSSAPRSPPSVSDILVEILFMLDIALNFRTTFVSTSGQ-------------------------VVYDARSICVHYVTTWLFVDLIAALPFDLLYAFNVSVYFGVHLLKTVRLLXXXXXXXXXXXXXXXXAVVLTLLMSMFALLAHWMACVWYFIGRREIENSPNSWDIGWLHELGKRLGGGPSVRSSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVSELLKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLA-ILGKGDLIGSDSLTKEQVIKTN----------------------ANVKALTYCDLQYISLKGLREVLRLYP 648          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351089 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C8C0_9STRA4.660e-83100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CA47_9STRA2.360e-541.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|351089 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVA8_9STRA0.000e+0100.00Cyclic nucleotide-binding domain-containing protei... [more]
A0A496R9D8_9SPIR5.970e-1421.84Crp/Fnr family transcriptional regulator n=1 Tax=S... [more]
A0A3B3U5E7_9TELE1.170e-1221.41Potassium voltage-gated channel, subfamily H (eag-... [more]
A0A3B4AWI9_9GOBI3.220e-1224.76Potassium voltage-gated channel, subfamily H (eag-... [more]
A0A835Y843_9CHLO5.120e-1222.94Cyclic nucleotide-binding domain-containing protei... [more]
A0A4W6D1E2_LATCA5.770e-1222.11Potassium voltage-gated channel, subfamily H (eag-... [more]
A0A8C3A112_CYCLU5.980e-1221.75Potassium voltage-gated channel, subfamily H (eag-... [more]
A0A4W6D0U8_LATCA7.750e-1221.74Potassium voltage-gated channel, subfamily H (eag-... [more]
A0A3B3VHC2_9TELE7.820e-1221.83Potassium voltage-gated channel, subfamily H (eag-... [more]
A0A673XUC0_SALTR7.970e-1221.26Potassium voltage-gated channel, subfamily H (eag-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_80contigContig_80:331751..332688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351089|estExt_Genemark1.C_Ctg_800039
Hectar predicted targeting categorysignal anchor
TranscriptId351411
TrackFilteredModels1
ProteinId351089
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351089gene_11746Tribonema minus UTEX_B_3156 geneContig_80 331751..332688 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11746_2exon_11746_2Tribonema minus UTEX_B_3156 exonContig_80 331751..332221 -
exon_11746_1exon_11746_1Tribonema minus UTEX_B_3156 exonContig_80 332680..332688 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_11746UTR3_11746Tribonema minus UTEX_B_3156 three_prime_UTRContig_80 331751..331831 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11746CDS_11746Tribonema minus UTEX_B_3156 CDSContig_80 332680..332688 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351089Trimin1|351089|estExt_Genemark1.C_Ctg_800039Tribonema minus UTEX_B_3156 polypeptideContig_80 331832..332688 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11746 ID=mRNA_11746|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=480bp|location=Sequence derived from alignment at Contig_80:331751..332688- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGAGACGCTTGATCCCTCTTCCAAACGTACGGACATCATCCTGGC
GTTGGTTGCCGGAGCAGCCATTGGGGGTTTTGTGGCGTACACCATGGTCC
AGACAGGGAACCTGACTCACAAATTCGACAACCTGGAGAAGACAATCAGC
GCCCTGTCTGACAAGTTTGACACATTCAGCAAAAGCGTCAGCGATGACAT
GGACACGCTCAAAATGCAGCTCAATATGCTGTTGGGCATTGGTGCTGCCT
CGGCATTTGTGGTATCGTCACCAACTCTATCTTTTTTTGTCAAGAAAGCG
AAGGAGGGGCTGCAGGCGATCACAGGCAGTGACCAGGAGGCAACAGACGC
GAAGCAGAAGCTGGAGGAGAAGCCCAATGCAAAGTCTAGCAAACAGTGAA
TGAAGGGGCTGGAGGCGCCAACAGCTTTTGCTGGCTGGTTTGTATGTAGC
ACACTGTACATGTCCAAGTTTCTCAACAGA
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protein sequence of jgi.p|Trimin1|351089

>Trimin1|351089|estExt_Genemark1.C_Ctg_800039 ID=Trimin1|351089|estExt_Genemark1.C_Ctg_800039|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp
MGETLDPSSKRTDIILALVAGAAIGGFVAYTMVQTGNLTHKFDNLEKTIS
ALSDKFDTFSKSVSDDMDTLKMQLNMLLGIGAASAFVVSSPTLSFFVKKA
KEGLQAITGSDQEATDAKQKLEEKPNAKSSKQ*
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mRNA from alignment at Contig_80:331751..332688-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11746 ID=mRNA_11746|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=938bp|location=Sequence derived from alignment at Contig_80:331751..332688- (Tribonema minus UTEX_B_3156 )
ATGGGCGAGGTGCGTAGTTGGAAAATTCGTCGTACTGACATGCTTATGAA TCGTGCTGCGCTGTAAATGTCCTCGGCAGCAAAGTGTCCACATGTTTGCC CTCCACAGCAACACCTGCTTCTCGATAACCTTGATGACTTATTATGTGAA ACCTTCATTGCTCAAGCTTGCGGAATCGGGTCTTGCAGAGCGTGTTTCTC CGTTGAAGTTGTGATTTGCATGTGTGGTTGCTCTTGCGGCGTTGTCATCT GTGTGCTGGCCACGGTTGCCGTAAGACAACGAGTTTGTGCAGCTGCTTGG ACAAGTTTTGCTTGCTATGATGCAGATGCTCGATTACTTGCCCAAACGCC AGGGCATCTTTGTGTTGGCATCAGCCACTGATTGTTCTTTGCTGACCACC GGCGTTCACGGTTGCCTGCCAGACACCTTCTGATGCGCTGATGATACATT TGCTTGCATTATTGCAGACGCTTGATCCCTCTTCCAAACGTACGGACATC ATCCTGGCGTTGGTTGCCGGAGCAGCCATTGGGGGTTTTGTGGCGTACAC CATGGTCCAGACAGGGAACCTGACTCACAAATTCGACAACCTGGAGAAGA CAATCAGCGCCCTGTCTGACAAGTTTGACACATTCAGCAAAAGCGTCAGC GATGACATGGACACGCTCAAAATGCAGCTCAATATGCTGTTGGGCATTGG TGCTGCCTCGGCATTTGTGGTATCGTCACCAACTCTATCTTTTTTTGTCA AGAAAGCGAAGGAGGGGCTGCAGGCGATCACAGGCAGTGACCAGGAGGCA ACAGACGCGAAGCAGAAGCTGGAGGAGAAGCCCAATGCAAAGTCTAGCAA ACAGTGAATGAAGGGGCTGGAGGCGCCAACAGCTTTTGCTGGCTGGTTTG TATGTAGCACACTGTACATGTCCAAGTTTCTCAACAGA
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Coding sequence (CDS) from alignment at Contig_80:331751..332688-

>mRNA_11746 ID=mRNA_11746|Name=jgi.p|Trimin1|351089|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=399bp|location=Sequence derived from alignment at Contig_80:331751..332688- (Tribonema minus UTEX_B_3156 )
ATGGGCGAGACGCTTGATCCCTCTTCCAAACGTACGGACATCATCCTGGC
GTTGGTTGCCGGAGCAGCCATTGGGGGTTTTGTGGCGTACACCATGGTCC
AGACAGGGAACCTGACTCACAAATTCGACAACCTGGAGAAGACAATCAGC
GCCCTGTCTGACAAGTTTGACACATTCAGCAAAAGCGTCAGCGATGACAT
GGACACGCTCAAAATGCAGCTCAATATGCTGTTGGGCATTGGTGCTGCCT
CGGCATTTGTGGTATCGTCACCAACTCTATCTTTTTTTGTCAAGAAAGCG
AAGGAGGGGCTGCAGGCGATCACAGGCAGTGACCAGGAGGCAACAGACGC
GAAGCAGAAGCTGGAGGAGAAGCCCAATGCAAAGTCTAGCAAACAGTGA
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