mRNA_C-linearis_contig103.854.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig103.854.1 vs. uniprot
Match: D7FMF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF4_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 2.390e-37
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 3

Query:   45 MRFGALAWVIVCCQAAVTLIGGDAFVISKSFMRRAAALSESRGDTIHAATADQLERIVEGPVVDLRGGKTTGSKKGSSGXXXXXXXXXXXXXXXXXXXKEPKKPSFLATIKAFFKSLIDPHFVLKLEAKKEKHNTVHGSGS 467
            MR    A VI+CC AA TL    AFV+SKS +RRA ALSE R   + AAT  Q+E++V+GPVVDLRGGKTTGSKKG      XXXXXXXXXXXXXX      KPSF+ATIKAFF+SL++PHF LKL+AKKE+HNTVHGSGS
Sbjct:    1 MRLSTAASVIICCHAAATLNSSHAFVVSKSSIRRAGALSEGRESAV-AATMGQMEQVVDGPVVDLRGGKTTGSKKGKESSAKXXXXXXXXXXXXXX------KPSFIATIKAFFQSLVNPHFALKLQAKKEQHNTVHGSGS 134

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BLAST of mRNA_C-linearis_contig103.854.1 vs. uniprot
Match: A0A6H5KGU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU7_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.360e-16
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 3

Query:   45 MRFGALAWVIVCCQAAVTLIGGDAFVISKSFMRRAAALSESRGDTIHAATADQLERIVEGPVVDLRGGKTTGSKK 269
            MR   ++  I+CC AA TL    A V+SKS +RRA ALSE R   + AA  DQ+E++V+GPVVDLRGGKTTGSKK
Sbjct:    2 MRLSTVSSAIICCHAAATLNSSHALVVSKSSIRRAGALSEGRESAV-AAAMDQMEQVVDGPVVDLRGGKTTGSKK 75

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig103.854.1 vs. uniprot

BLAST of mRNA_C-linearis_contig103.854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2

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POSITION

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Match Name	E-value	Identity	Description
D7FMF4_ECTSI	2.390e-37	66.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KGU7_9PHAE	3.360e-16	58.67	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]