Homology
BLAST of mRNA_C-linearis_contig103.854.1 vs. uniprot
Match:
D7FMF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF4_ECTSI)
HSP 1 Score: 143 bits (360), Expect = 2.760e-41
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 0
Query: 1 MRFGALAWVIVCCQAAVTLIGGDAFVISKSFMRRAAALSESRGDTIHAATADQLERIVEGPVVDLRGGKTTGSKKGSSGXXXXXXXXXXXXXXXXXXXKEPKKPSFLATIKAFFKSLIDPHFVLKLEAKKEKHNTVHGSGS 141
MR A VI+CC AA TL AFV+SKS +RRA ALSE R + AAT Q+E++V+GPVVDLRGGKTTGSKKG XXXXXXXXXXXXXX KPSF+ATIKAFF+SL++PHF LKL+AKKE+HNTVHGSGS
Sbjct: 1 MRLSTAASVIICCHAAATLNSSHAFVVSKSSIRRAGALSEGRESAV-AATMGQMEQVVDGPVVDLRGGKTTGSKKGKESSAKXXXXXXXXXXXXXX------KPSFIATIKAFFQSLVNPHFALKLQAKKEQHNTVHGSGS 134
BLAST of mRNA_C-linearis_contig103.854.1 vs. uniprot
Match:
A0A6H5KGU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU7_9PHAE)
HSP 1 Score: 83.2 bits (204), Expect = 3.510e-18
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query: 1 MRFGALAWVIVCCQAAVTLIGGDAFVISKSFMRRAAALSESRGDTIHAATADQLERIVEGPVVDLRGGKTTGSKK 75
MR ++ I+CC AA TL A V+SKS +RRA ALSE R + AA DQ+E++V+GPVVDLRGGKTTGSKK
Sbjct: 2 MRLSTVSSAIICCHAAATLNSSHALVVSKSSIRRAGALSEGRESAV-AAAMDQMEQVVDGPVVDLRGGKTTGSKK 75
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.854.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M R F G A L A W V I V C C Q A A V T L I G G D A F V I S K S F M R R A A A L S E S R G D T I H A A T A D Q L E R I V E G P V V D L R G G K T T G S K K G S S G K G S K S S S S K G K S S K L S K S K K E P K K P S F L A T I K A F F K S L I D P H F V L K L E A K K E K H N T V H G S G S T * 20 40 60 80 100 120 140 Expect = 2.76e-41 / Id = 66.67 Expect = 3.51e-18 / Id = 58.67 Sequence D7FMF4_ECTSI A0A6H5KGU7_9PHAE
Match Name E-value Identity Description
D7FMF4_ECTSI 2.760e-41 66.67 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5KGU7_9PHAE 3.510e-18 58.67 Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M R F G A L A W V I V C C Q A A V T L I G G D A F V I S K S F M R R A A A L S E S R G D T I H A A T A D Q L E R I V E G P V V D L R G G K T T G S K K G S S G K G S K S S S S K G K S S K L S K S K K E P K K P S F L A T I K A F F K S L I D P H F V L K L E A K K E K H N T V H G S G S T * 20 40 60 80 100 120 140 Score = Score = Score = Score = Score = Score = 0.546 Score = Sequence SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_N_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_H_REGION SignalP-TM TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 12..15 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..15 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..2 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 16..142 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 3..11 None No IPR available SIGNALP_EUK SignalP-TM SignalP-TM coord: 1..15 None No IPR available TMHMM TMhelix coord: 5..27
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig103.854.1 ID=prot_C-linearis_contig103.854.1|Name=mRNA_C-linearis_contig103.854.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=143bp back to top