Trimin1|347862|estExt_Genemark1.C_Ctg_160128 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347862
Unique NameTrimin1|347862|estExt_Genemark1.C_Ctg_160128
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length972
Homology
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A836CJ69_9STRA (CSD_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ69_9STRA)

HSP 1 Score: 1770 bits (4584), Expect = 0.000e+0
Identity = 971/971 (100.00%), Postives = 971/971 (100.00%), Query Frame = 0
Query:    1 MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELGVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRCDGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFFHLSEVIPPAQEPSSTXXXXXXXXXXXXSRGPVPHRRKPPQAGSAVVGKGQEVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEGQAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQQQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGKGIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPSVKDFFHWSDLLDASSLGPVRERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPAPRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVEDAGADETAEEVGEQGTGVAEHG 971
            MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELGVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRCDGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFFHLSEVIPPAQEPSSTXXXXXXXXXXXXSRGPVPHRRKPPQAGSAVVGKGQEVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEGQAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQQQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGKGIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPSVKDFFHWSDLLDASSLGPVRERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPAPRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVEDAGADETAEEVGEQGTGVAEHG
Sbjct:    1 MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELGVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRCDGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFFHLSEVIPPAQEPSSTXXXXXXXXXXXXSRGPVPHRRKPPQAGSAVVGKGQEVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEGQAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQQQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGKGIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPSVKDFFHWSDLLDASSLGPVRERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPAPRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVEDAGADETAEEVGEQGTGVAEHG 971          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.070e-26
Identity = 123/413 (29.78%), Postives = 184/413 (44.55%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRV-PGG-PSAYQARKSHPDRAADFRRIETAYDGLIRITSAV-----------AAAPAAEEKEGEAMEGQD--EEVVEQERIVNRM----------------ASFALVCVLPAPALDGSGE----------------VDQL-------LSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPREL---------YFALASVEFPEEL-----GVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAV 368
            ++R GDLFFHL+EAP ++ VGDE +F +G+  RS ++CA++L  L PGTV  E ++   + G+++RDIR  P   PS ++A      R  + ++ E    GLI+IT A             A P  E +  +A EG D  +   E E  V  +                 + A+    PAPA DG G+                 D L         RGDEV  +++++KVTGR + V   LV + R +RE E+L++L    A ++          Y  L S+  PE +      V    +G  L + G+  EFW V    ++ R ++RA+  K+LPP     E      V G V R PT+  +         Q  G      G   G+     R ++P     EE  GE A+
Sbjct:  176 MDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMGRSRPQESQQSE----GLIKITGAAPPEDPPAASDTTAPPEREVQPADATEGGDGTDTSFETEAAVAGVDDAAGTSAPAATPETEEAVAVRSTQPAPAGDGKGDRAAPLGLQGAMVTYLVTDSLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVELVLVRTNREKREGEQLQKLIESGATKQQGVVKKLTHDYGFLRSLSCPETVYFNTAHVVQSREGERL-RVGSQAEFWVVPDRTKDRRESFRALEIKVLPPGTLTLEEETHKSVRGTVERAPTFPHR---------QSFGGGREGGGGAGGMQPGSARFVIPAPDTAEE--GEEAL 572          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: H3GWZ1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ1_PHYRM)

HSP 1 Score: 103 bits (256), Expect = 1.500e-18
Identity = 137/523 (26.20%), Postives = 213/523 (40.73%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSR------GDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPEELGVRDKAQG------------MSLIKEGAPMEFWAVA-QADREGRPTWR--AVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRP-GTARFQLEGEALSATGAGSGVASFMGRDIVPGLGL----GEECRGEGAVRV----------EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 485
            +ER GDLFFH+SEAP DVQ+ DE EF V  N+RS++E A +L  L  GT++ E V   +  G+V + +  P G         + DR    +R E    GLI IT+        +EKE +  EG+DE   ++ R       F    V      +G  +      +      GDEV  ++A+ + TG  + V   +  SAR + E+E   +L                    K  + P ++YF    +  PEE    D  QG             S+I+EG  + F+    Q D   RP  R  A+  + LP    + E  +  DV G+V++ P      P   G   F+      +     + V +  G +  P        G+  + + + R+           + D++  D V    +G+ +A  VRV +L     E    N   +E FGFIK +  S       + +F   DV   +       EV + ++A  +     A R QIL       E  + +G
Sbjct:  204 MERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIQVEDVSDEFHDGVVTKSL--PRGGHGGGRGFFNDDR---HQREEG--HGLIEITTT----QEGDEKEEQVQEGEDE-ATKKTRNKREFVRFNSDSVASDAKTEGDEQESGRPKKSAIPHFGDEVHFRIAKHRKTGAKRAVEITVTTSAREKFEKEIEAKLTTMTRENGIVDRVKNGGGFIKCCDRPMDVYFPFHEIREPEESDKNDDEQGEGSDKPRRGRQGKSVIREGDEVSFFVYEDQEDDSARPRSRLTALRVQKLPSGSVSFEELVRADVEGLVSKLPKEPRNAPEVIGAITFEPIAAEKTGEAKDAAVEATAGSEEKPSKKKKNKDGKSKKSKVSFRLCDTEDMSYVPHIDDKVKFDEVLDKRTGKHKAVKVRVFQLNPKNRETGTINAL-KEDFGFIKCAERS------GDAYFRFSDVMGNSRSFKNGTEVAFDVIADNKSDNIRATRLQILPRGTIKWEDVVADG 707          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: W2QJD1_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QJD1_PHYPN)

HSP 1 Score: 100 bits (248), Expect = 1.290e-17
Identity = 142/517 (27.47%), Postives = 216/517 (41.78%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRI--TSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPE-------ELGVRDKAQ------GMSLIKEGAPMEFWAVA-QADREGR--PTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPG--------TARFQL----EGEALSATGA----GSGVASFMGRDIVPGLGLGEECRGEGAVRV----------EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQIL 471
            +ER GDLFFH+SEAP DVQ+ DE EF V  N+RS++E A +L  L  GT+K E V   +  GIV + +     P     R     R  D RR E    GLI +         P  EE+E    +   + +V +E +  R  S ++          G  + + +   GDEV  ++A+ + TG  + V   + +SAR + ++E   +L                    K  + P ++YF    +   E       E+   DK++      G S I+EG  + F+    Q D  GR  P   A+  + LPP   + E  +  D+ G V++ P    K+PR G            +L    EGE L  T A       +    G+D       G+  + + A R+           + D++  D V    +G+V+A  VRV +L     E  V N   +E FGFIK +  S       + +F   DV   +       EV + +L   +     A R QIL
Sbjct:  186 MERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSEEYCDGIVTKSL-----PRHGSGRGFFNSRDDDRRREE---HGLIEVKKNETEDENPKTEEQEQTEEDADKKPLVRREFV--RFTSESVAANDDDQEQPGRSKKNPIPHFGDEVRFRIAKHRKTGAKRAVDITITVSAREKLDKEIKAKLATMTRETGVVDRVKNGGGFIKCCDRPVDVYFPFHELRESEDEKNDKKEVETEDKSRPGRQTKGPS-IREGDEVSFFVYEDQEDDSGRSRPRLTALRVQKLPPGTVSFEKLLRSDIEGFVSKLP----KEPRNGPEVIGSIAVTSTELVHADEGEELQETVAEESEDKSLKKKKGKD-------GKAKKQKVAFRLCDTEDMSYIPHIDDKVAFDEVLDKRTGKVKAVKVRVVQLNPKNRETGVINAM-KEDFGFIKCAERS------GDAYFRFSDVMGTSRSFNNGTEVAFDVLVDNKSDHIRATRLQIL 673          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A0P1AQ30_PLAHL (Cold shock domain-containing protein e1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ30_PLAHL)

HSP 1 Score: 97.1 bits (240), Expect = 1.150e-16
Identity = 134/531 (25.24%), Postives = 219/531 (41.24%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNR------MASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSAR-------------IRREQEELKRLKH-------INAPRELYFALASVEFPEELGVRDKAQGMS-------------LIKEGAPMEFWAVAQADREGRPTWR---AVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVP---GLGLGEE-----------------CRGEGAVRV-EVGDEILADLVKVCLSGQVRAKNVRVAKL-KGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 485
            ++R GDLFFH+SEAP D+Q+ DE E+ V  N+RS++E A +L  LA GT+K E V   W+ GIV + + + GG   Y   +       D RR    Y GLI +  ++  +    E+EG   + Q +E V+++ +  R        S A + V          +V+     GDEV  ++A  + TG  + V   + +SAR             + RE   + R+K+        + P ELYF+    E  E++  R+     S              I EG  + F+   + + + R + R   A+  + LP    + E  +  DV G+V + P    K+PR     F            GS       ++IV     + + EE                 C  E    +  + D+++ D V    + +++A  VR  +L +  R  G++  ++D   FGFIK            + +F   DV           EV + ++   +     A R Q+L       E  L+EG
Sbjct:  203 LDRDGDLFFHISEAPIDIQLQDEVEYRVKYNQRSDKEMACQLVSLAKGTIKTEEVSDEWYDGIVTKSL-LRGGSRGYAYNRD------DDRRHREEY-GLIEVKKSIKESET--EQEGTVEQTQADEDVKKKTLAKRELIRFTSESLAAISVAEDEGHTDRAKVNLTPHFGDEVRFKIARHRKTGGKRAVDLTITVSAREKLNKEVEAKLAMMTREMGVVDRVKYGGGFIKCCDRPIELYFSFD--ELLEDIESRNNKDDDSKDEHHTGRQGKGPYIGEGDEVSFFVYEEQEDDSRHSRRRLSALRVQKLPAGSVSFEQLLRSDVEGVVKKVP----KEPRNSPEVF------------GSIAKEIYPQEIVEVEDNVDISEENKKVKNGIEGQKVAFRLCDTEDPSYIPHIDDKVVFDEVLDKRTRRIKAVKVRFVQLCQKNRETGVINGMKDE--FGFIKCVERF------GDAYFRFSDVMGMNRNFSTGTEVAFDVVVDTKSDHVRATRVQLLPRGTVKWEAVLLEG 697          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 9.080e-16
Identity = 80/266 (30.08%), Postives = 121/266 (45.49%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIR-VPGG-PSAYQARKSHPDRAADFRRIETAYDGLIRITSAV----------AAAPAAEEKEGEAMEGQDEEVV-----------EQERIVNRMAS----------------FALVCVLPAPALDGSGEVDQLLS-----------------------RGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL 227
            ++R GDLFFHL+EAP ++ VGDE +F +G+  RS ++CA++L  L PGTV  E ++   + G+++RDIR  P   PS ++A      R  ++++ E    GLI+IT A            A P  E +  +A EG D               E E  V  +                   A+    P  A D  G+    L                        RGDEV  +++++KVTGR + V   LV + R +RE E+L++L
Sbjct:  177 MDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEYQQSE----GLIKITGAAPPEEPAADDTTAPPEGEVQPADATEGGDGTXXXXXXXXXXXSPETEAAVAGVDDAAGTSAPAXXXXXXXXVAVRSTQPTLAGDDKGDTAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVEVVLVRTNREKREGEQLQKL 438          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A8K1FLP7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLP7_PYTOL)

HSP 1 Score: 91.3 bits (225), Expect = 6.760e-15
Identity = 115/462 (24.89%), Postives = 196/462 (42.42%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSR-GDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALAS-------------VEFP-----EELGVRDKAQGMSLIKEGAPMEFWAVAQADREG----RPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVE----VGDEILADLVKVCLSGQVRAKNVRVAKLKGPRME-GIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRY 457
            V+R GD+FFH+SEAP DV++ DE EF V  N+RS ++ AV+L +L  G++ +E +   +  G V + I  P G S + +  S         R ET   GLI +            +  +A  G++     + R V R  + ++       + D  GE  + +   GDEV  ++A  + +G+ + V   +  SA+ + E+E   +L+ +   + +   + S             V FP     E +G   + +    ++E   + F+   + D E     R    A+    LP    + E  I  DV G+V + P    K+PR G     +         A     S  G+  +     G   R   A        VGD ++ D V    S +++A NVRV +L     E G++  +++   FGFI+ +  S       + +F   DV   +++     EV +
Sbjct:  204 VDREGDIFFHMSEAPVDVELQDEVEFKVKYNQRSQKDIAVQLVRLPKGSIVWEDIAEEFVEGTVTKGI--PRGNSYHNSSSS---------RDET--HGLIEVR-----------RPEDAKSGEESGETLKRREVVRYTATSVA------SGDAEGENKKPVPHFGDEVRFRIATHRKSGQKRAVELTVTQSAKDKLEKEIDAKLQSMTREQGVVARVKSGGGFIRCCARQDDVYFPFHEIRESIGTETEKKSKLTLRESDEVSFYVYEEKDEEAGARSRGRLTALRVVKLPAGTVSFEDLIRSDVNGVVTKTP----KEPRTGPEVLGVINPTDDDVVAEIPSESPKGKSGLKKKKTGVSFRLSDAQDASYIPAVGDVVVFDQVMDKRSNRIKASNVRVTQLNPKNRETGVITAMKEE--FGFIRCAERS------GDAYFRFADVMSVSNDFRIGTEVAF 623          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A484E9J3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9J3_BRELC)

HSP 1 Score: 89.7 bits (221), Expect = 2.030e-14
Identity = 129/509 (25.34%), Postives = 213/509 (41.85%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSAR-------------IRREQEELKRLKH-------INAPRELYF-----------ALASVEFPEELGV----RDKAQGMSLI-KEGAPMEFWAV-AQADREGRPTWRAVGPKLL--PPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTA--------RFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVE--------VGDEILADLVKVCLSGQVRAKNVRVAKLKGPRME-GIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQIL 471
            +ER GDLFFH+SEAP ++QV DE EF +  N+RS++E A +L  L  GT++ E +   ++ GIV + + +  GP    +R    +R  D R  E    GLI I +           +    EG+DE    +   V R  S +L  +    A   + E+  +   GDEV  ++A+ + TG  + +   +V+SAR             + RE   + R+K+          P ++YF           A+ +  + EE  V    R   +G  L+ +EG  + F+    Q D   R   R    ++L  P    + E  +  +V G+V + P    K+PR G              E E      A + +     + +    G+    +    +R          + D++  D V    +G V+A  V V +L     E G+++ ++  E FGFIK    S      S+ +F   DV   +  +    EV + +   ++     A R QIL
Sbjct:  167 LERDGDLFFHISEAPVEIQVHDEVEFQIKYNQRSDKEMACQLVALPKGTIQVEEISDDFYLGIVTKSLSL--GPHQGGSRGYSNNRDQDRRLREE--HGLIEIKTDKTEKETVTNDQDMTNEGEDERAQRKREFV-RFTSESL-SIKQDEARVSTNELPHV---GDEVRFRIAKHRKTGLRRAIEMVIVVSAREKLEKEIELELATLSREMGVVSRMKNGGGFIKCCERPVDIYFPFHEIRESDNEAMKAQGYCEESNVDEISRSNRRGKGLLLREGDEVSFYVYEVQEDDTSRSRSRLTALRVLKLPVGTVSFEQLLRSNVEGMVVKAP----KEPRNGPEIIGSIAIEPLSTEKEEERKQDAENEIDESENKQLKKKKGMKTLQKVAFHLRDTEDMSYVPYIDDKVAFDEVLDKRTGTVKAVKVHVVQLNQTNRECGVISAVK--EDFGFIKCVERS------SDAYFRFSDVMGASQNVSNGTEVAFDVFVDEKSDNIRATRLQIL 654          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: G4Z9V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9V3_PHYSP)

HSP 1 Score: 88.6 bits (218), Expect = 4.690e-14
Identity = 130/539 (24.12%), Postives = 209/539 (38.78%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPG---GPSAYQARKSHPDRAADFRRIETAYDGLIRITSA-----------VAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPEELGVRDKAQGMSL----------------IKEGAPMEFWAVAQADREG---RPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPP-------------TYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEE-----CRGEGAVRV-EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 485
            +ER GDLFFH+SEAP DVQ+ DE EF V  N+RS++E A +L  L  GT+K E V    + G+V + +   G   G   +  R        D  R +    GLI +  A            AA    E+ + EA     + +  +E +     S A++         G  + + +   GDEV  ++A+ + TG  + V   + +SAR + E+E   +L                    K  + P ++YF    +  PEE                            ++EG  + F+     + +    RP   A+  + LPP   + E  +  DV G+V++ P             T ++ +P  G    + +  A+  T    G  S   +    G    ++     C  E    V  + D+++ D V    +G+++A  VRV +L     E    N   +E FGFIK +  S       + +F   DV   +       EV + +    +     A R QIL       E    EG
Sbjct:  183 LERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSDELFDGVVTKSLPRGGHGGGRGFFNNR--------DDDRHQREEHGLIEVKKAPEQGEDAKAEETAATGDEEQTQEEADASPKKTLARREFVRFNSESVAVIEEKDDQEQTGRPKKNPIPHFGDEVRFRIAKHRKTGAKRAVDIIITVSAREKLEKEIEAKLETMTRETGVVDRVKNGGGFIKCCDRPVDVYFPFHEIREPEEXXXXXXXXXXXXXXXXXXXXXXXXKGPTLREGDEVSFFVYEDQEDDSARSRPRLTALRVQKLPPGSVSFEELVRADVEGLVSKLPKEPRNGPEVIGSITVASVEPSDGEKSEEAKDAAIETTPESEGKPSKKKKGN-NGKAKKQKVSFRLCDTEDMSYVPHIDDKVVFDEVLDKRTGKMKAVKVRVVQLNPKNRETGTINAM-KEDFGFIKCAERS------GDAYFRFSDVMGISRSYNNGTEVAFDVQVDNKSDHIRATRLQILPRGTVKWEDVAAEG 705          
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A6A4EEB2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EEB2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.690e-14
Identity = 129/528 (24.43%), Postives = 205/528 (38.83%), Query Frame = 0
Query:   24 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRV---PGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPEELGVRDKAQGMS----------------LIKEGAPMEFWAVAQADREG---RPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPR-----------PGTARFQLEG-EALSATGAGSGVASFMGRDIVPGLGLGEE-----CRGEGAVRV-EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRME-GIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 485
            +ER GDLFFH+SEAP  VQ+ DE EF V +N+RS++E A +L  L  GT++ E +      G+V + +      GG   +  R     +  +   IE   +    + +A      AE+ E EA     +    +E +     S ALV         G  + + +   GD+V  ++A+ + TG  + V   + +SAR + E+E   +L                    K  + P ++YF    +  PE     D   G                   ++EG  + F+     + +    RP   A+  + LP    + E  I  DV G+V++ P      P            P  A    E  +A + T A S    +  +    G    ++     C  E    V  + D++  D V    +G V+A  VRV +L     E G +  L+D   FGFIK +  S       + +F   DV   +       EV + ++   +     A R QIL       E    EG
Sbjct:  195 LERDGDLFFHMSEAPVGVQLQDEVEFRVKLNQRSDKEMACQLVALPKGTIQVEELSDELVDGVVTKSLPRGGHAGGRGFFNGRDDDRHQREEHGLIEVKREAETEVEAA------AEQTEQEADAPLKKTRARREIVRFNSESVALVEDKDEQEQSGRPKRNPIPHFGDQVRFRIAKHRKTGAKRAVDITITVSAREKLEKEMEAKLATMTREMGVVDRVKNGGGFIKCCDRPVDIYFPFHEIREPEGGDTSDIKDGEQSEATDKPRRGRQGKGPTLREGDEVSFFVYEDQEDDSARSRPRLTALRVQKLPAGSVSFEELIRADVEGLVSKLPKEPRNGPEVIGSIAVASAEPTDAEMSEEAKDAATETTAESEGKPYKKKKGKDGKAKKQKVSFRLCDTEDMSYVPHIDDKVAFDEVLDKRTGNVKAVKVRVVQLNPKNRETGTINALKDD--FGFIKCAERS------GDAYFRFSDVMGTSRSFSNGTEVAFDVIVDTKSDHIRATRLQILPRGTVKWEDVAAEG 708          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ69_9STRA0.000e+0100.00CSD_1 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5L4Q3_9PHAE1.070e-2629.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3GWZ1_PHYRM1.500e-1826.20Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2QJD1_PHYPN1.290e-1727.47Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A0P1AQ30_PLAHL1.150e-1625.24Cold shock domain-containing protein e1 n=1 Tax=Pl... [more]
D7FPP6_ECTSI9.080e-1630.08CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8K1FLP7_PYTOL6.760e-1524.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484E9J3_BRELC2.030e-1425.34Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4Z9V3_PHYSP4.690e-1424.12Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A4EEB2_9STRA4.690e-1424.43Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 385..481
e-value: 1.4E-7
score: 33.3
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 22..74
e-value: 1.1E-7
score: 33.8
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 522..626
e-value: 8.2E-12
score: 47.1
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 401..465
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 514..557
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 559..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 559..581
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 669..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 791..823
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 951..971
NoneNo IPR availablePANTHERPTHR12913:SF1COLD SHOCK DOMAIN-CONTAINING PROTEIN E1coord: 24..463
NoneNo IPR availablePANTHERPTHR12913UNR PROTEIN N-RAS UPSTREAM GENE PROTEINcoord: 471..645
coord: 24..463
NoneNo IPR availablePANTHERPTHR12913:SF1COLD SHOCK DOMAIN-CONTAINING PROTEIN E1coord: 471..645
IPR019844Cold-shock (CSD) domainPROSITEPS00352CSD_1coord: 536..555

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:1137066..1150308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347862mRNA_3050Tribonema minus UTEX_B_3156 mRNAContig_16 1136554..1150308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347862|estExt_Genemark1.C_Ctg_160128 ID=Trimin1|347862|estExt_Genemark1.C_Ctg_160128|Name=jgi.p|Trimin1|347862|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=972bp
MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFV
VGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAY
QARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEE
VVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKV
TGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELG
VRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEA
PIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGR
DIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLK
GPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELV
ESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRC
DGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFF
HLSEVIPPAQEPSSTSTSDAPQQQQQQSRGPVPHRRKPPQAGSAVVGKGQ
EVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEG
QAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQ
QQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGK
GIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPAPAPVA
ADSEAAPADAPPPPPPATLATLAAAAAPQPSVKDFFHWSDLLDASSLGPV
RERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPA
PRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVED
AGADETAEEVGEQGTGVAEHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR019844CSD_1