mRNA_3050 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347862
Unique NamemRNA_3050
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A836CJ69_9STRA (CSD_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ69_9STRA)

HSP 1 Score: 1770 bits (4584), Expect = 0.000e+0
Identity = 971/971 (100.00%), Postives = 971/971 (100.00%), Query Frame = 1 
Query:    1 MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELGVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRCDGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFFHLSEVIPPAQEPSSTXXXXXXXXXXXXSRGPVPHRRKPPQAGSAVVGKGQEVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEGQAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQQQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGKGIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPSVKDFFHWSDLLDASSLGPVRERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPAPRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVEDAGADETAEEVGEQGTGVAEHG 2913
            MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELGVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRCDGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFFHLSEVIPPAQEPSSTXXXXXXXXXXXXSRGPVPHRRKPPQAGSAVVGKGQEVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEGQAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQQQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGKGIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPSVKDFFHWSDLLDASSLGPVRERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPAPRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVEDAGADETAEEVGEQGTGVAEHG
Sbjct:    1 MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELGVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRCDGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFFHLSEVIPPAQEPSSTXXXXXXXXXXXXSRGPVPHRRKPPQAGSAVVGKGQEVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEGQAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQQQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGKGIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPSVKDFFHWSDLLDASSLGPVRERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPAPRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVEDAGADETAEEVGEQGTGVAEHG 971
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.530e-26
Identity = 123/413 (29.78%), Postives = 184/413 (44.55%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRV-PGG-PSAYQARKSHPDRAADFRRIETAYDGLIRITSAV-----------AAAPAAEEKEGEAMEGQD--EEVVEQERIVNRM----------------ASFALVCVLPAPALDGSGE----------------VDQL-------LSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPREL---------YFALASVEFPEEL-----GVRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAV 1104
            ++R GDLFFHL+EAP ++ VGDE +F +G+  RS ++CA++L  L PGTV  E ++   + G+++RDIR  P   PS ++A      R  + ++ E    GLI+IT A             A P  E +  +A EG D  +   E E  V  +                 + A+    PAPA DG G+                 D L         RGDEV  +++++KVTGR + V   LV + R +RE E+L++L    A ++          Y  L S+  PE +      V    +G  L + G+  EFW V    ++ R ++RA+  K+LPP     E      V G V R PT+  +         Q  G      G   G+     R ++P     EE  GE A+
Sbjct:  176 MDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMGRSRPQESQQSE----GLIKITGAAPPEDPPAASDTTAPPEREVQPADATEGGDGTDTSFETEAAVAGVDDAAGTSAPAATPETEEAVAVRSTQPAPAGDGKGDRAAPLGLQGAMVTYLVTDSLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVELVLVRTNREKREGEQLQKLIESGATKQQGVVKKLTHDYGFLRSLSCPETVYFNTAHVVQSREGERL-RVGSQAEFWVVPDRTKDRRESFRALEIKVLPPGTLTLEEETHKSVRGTVERAPTFPHR---------QSFGGGREGGGGAGGMQPGSARFVIPAPDTAEE--GEEAL 572
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: H3GWZ1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ1_PHYRM)

HSP 1 Score: 103 bits (256), Expect = 1.990e-18
Identity = 137/523 (26.20%), Postives = 213/523 (40.73%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSR------GDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPEELGVRDKAQG------------MSLIKEGAPMEFWAVA-QADREGRPTWR--AVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRP-GTARFQLEGEALSATGAGSGVASFMGRDIVPGLGL----GEECRGEGAVRV----------EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 1455
            +ER GDLFFH+SEAP DVQ+ DE EF V  N+RS++E A +L  L  GT++ E V   +  G+V + +  P G         + DR    +R E    GLI IT+        +EKE +  EG+DE   ++ R       F    V      +G  +      +      GDEV  ++A+ + TG  + V   +  SAR + E+E   +L                    K  + P ++YF    +  PEE    D  QG             S+I+EG  + F+    Q D   RP  R  A+  + LP    + E  +  DV G+V++ P      P   G   F+      +     + V +  G +  P        G+  + + + R+           + D++  D V    +G+ +A  VRV +L     E    N   +E FGFIK +  S       + +F   DV   +       EV + ++A  +     A R QIL       E  + +G
Sbjct:  204 MERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIQVEDVSDEFHDGVVTKSL--PRGGHGGGRGFFNDDR---HQREEG--HGLIEITTT----QEGDEKEEQVQEGEDE-ATKKTRNKREFVRFNSDSVASDAKTEGDEQESGRPKKSAIPHFGDEVHFRIAKHRKTGAKRAVEITVTTSAREKFEKEIEAKLTTMTRENGIVDRVKNGGGFIKCCDRPMDVYFPFHEIREPEESDKNDDEQGEGSDKPRRGRQGKSVIREGDEVSFFVYEDQEDDSARPRSRLTALRVQKLPSGSVSFEELVRADVEGLVSKLPKEPRNAPEVIGAITFEPIAAEKTGEAKDAAVEATAGSEEKPSKKKKNKDGKSKKSKVSFRLCDTEDMSYVPHIDDKVKFDEVLDKRTGKHKAVKVRVFQLNPKNRETGTINAL-KEDFGFIKCAERS------GDAYFRFSDVMGNSRSFKNGTEVAFDVIADNKSDNIRATRLQILPRGTIKWEDVVADG 707
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: W2QJD1_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QJD1_PHYPN)

HSP 1 Score: 100 bits (248), Expect = 1.700e-17
Identity = 142/517 (27.47%), Postives = 216/517 (41.78%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRI--TSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPE-------ELGVRDKAQ------GMSLIKEGAPMEFWAVA-QADREGR--PTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPG--------TARFQL----EGEALSATGA----GSGVASFMGRDIVPGLGLGEECRGEGAVRV----------EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQIL 1413
            +ER GDLFFH+SEAP DVQ+ DE EF V  N+RS++E A +L  L  GT+K E V   +  GIV + +     P     R     R  D RR E    GLI +         P  EE+E    +   + +V +E +  R  S ++          G  + + +   GDEV  ++A+ + TG  + V   + +SAR + ++E   +L                    K  + P ++YF    +   E       E+   DK++      G S I+EG  + F+    Q D  GR  P   A+  + LPP   + E  +  D+ G V++ P    K+PR G            +L    EGE L  T A       +    G+D       G+  + + A R+           + D++  D V    +G+V+A  VRV +L     E  V N   +E FGFIK +  S       + +F   DV   +       EV + +L   +     A R QIL
Sbjct:  186 MERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSEEYCDGIVTKSL-----PRHGSGRGFFNSRDDDRRREE---HGLIEVKKNETEDENPKTEEQEQTEEDADKKPLVRREFV--RFTSESVAANDDDQEQPGRSKKNPIPHFGDEVRFRIAKHRKTGAKRAVDITITVSAREKLDKEIKAKLATMTRETGVVDRVKNGGGFIKCCDRPVDVYFPFHELRESEDEKNDKKEVETEDKSRPGRQTKGPS-IREGDEVSFFVYEDQEDDSGRSRPRLTALRVQKLPPGTVSFEKLLRSDIEGFVSKLP----KEPRNGPEVIGSIAVTSTELVHADEGEELQETVAEESEDKSLKKKKGKD-------GKAKKQKVAFRLCDTEDMSYIPHIDDKVAFDEVLDKRTGKVKAVKVRVVQLNPKNRETGVINAM-KEDFGFIKCAERS------GDAYFRFSDVMGTSRSFNNGTEVAFDVLVDNKSDHIRATRLQIL 673
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A0P1AQ30_PLAHL (Cold shock domain-containing protein e1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ30_PLAHL)

HSP 1 Score: 97.1 bits (240), Expect = 1.500e-16
Identity = 134/531 (25.24%), Postives = 219/531 (41.24%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNR------MASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSAR-------------IRREQEELKRLKH-------INAPRELYFALASVEFPEELGVRDKAQGMS-------------LIKEGAPMEFWAVAQADREGRPTWR---AVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVP---GLGLGEE-----------------CRGEGAVRV-EVGDEILADLVKVCLSGQVRAKNVRVAKL-KGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 1455
            ++R GDLFFH+SEAP D+Q+ DE E+ V  N+RS++E A +L  LA GT+K E V   W+ GIV + + + GG   Y   +       D RR    Y GLI +  ++  +    E+EG   + Q +E V+++ +  R        S A + V          +V+     GDEV  ++A  + TG  + V   + +SAR             + RE   + R+K+        + P ELYF+    E  E++  R+     S              I EG  + F+   + + + R + R   A+  + LP    + E  +  DV G+V + P    K+PR     F            GS       ++IV     + + EE                 C  E    +  + D+++ D V    + +++A  VR  +L +  R  G++  ++D   FGFIK            + +F   DV           EV + ++   +     A R Q+L       E  L+EG
Sbjct:  203 LDRDGDLFFHISEAPIDIQLQDEVEYRVKYNQRSDKEMACQLVSLAKGTIKTEEVSDEWYDGIVTKSL-LRGGSRGYAYNRD------DDRRHREEY-GLIEVKKSIKESET--EQEGTVEQTQADEDVKKKTLAKRELIRFTSESLAAISVAEDEGHTDRAKVNLTPHFGDEVRFKIARHRKTGGKRAVDLTITVSAREKLNKEVEAKLAMMTREMGVVDRVKYGGGFIKCCDRPIELYFSFD--ELLEDIESRNNKDDDSKDEHHTGRQGKGPYIGEGDEVSFFVYEEQEDDSRHSRRRLSALRVQKLPAGSVSFEQLLRSDVEGVVKKVP----KEPRNSPEVF------------GSIAKEIYPQEIVEVEDNVDISEENKKVKNGIEGQKVAFRLCDTEDPSYIPHIDDKVVFDEVLDKRTRRIKAVKVRFVQLCQKNRETGVINGMKDE--FGFIKCVERF------GDAYFRFSDVMGMNRNFSTGTEVAFDVVVDTKSDHVRATRVQLLPRGTVKWEAVLLEG 697
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.180e-15
Identity = 80/266 (30.08%), Postives = 121/266 (45.49%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIR-VPGG-PSAYQARKSHPDRAADFRRIETAYDGLIRITSAV----------AAAPAAEEKEGEAMEGQDEEVV-----------EQERIVNRMAS----------------FALVCVLPAPALDGSGEVDQLLS-----------------------RGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL 681
            ++R GDLFFHL+EAP ++ VGDE +F +G+  RS ++CA++L  L PGTV  E ++   + G+++RDIR  P   PS ++A      R  ++++ E    GLI+IT A            A P  E +  +A EG D               E E  V  +                   A+    P  A D  G+    L                        RGDEV  +++++KVTGR + V   LV + R +RE E+L++L
Sbjct:  177 MDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEYQQSE----GLIKITGAAPPEEPAADDTTAPPEGEVQPADATEGGDGTXXXXXXXXXXXSPETEAAVAGVDDAAGTSAPAXXXXXXXXVAVRSTQPTLAGDDKGDTAAPLGLQGAMVTYLVTDGLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVEVVLVRTNREKREGEQLQKL 438
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A8K1FLP7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLP7_PYTOL)

HSP 1 Score: 91.3 bits (225), Expect = 8.740e-15
Identity = 115/462 (24.89%), Postives = 196/462 (42.42%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSR-GDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALAS-------------VEFP-----EELGVRDKAQGMSLIKEGAPMEFWAVAQADREG----RPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVE----VGDEILADLVKVCLSGQVRAKNVRVAKLKGPRME-GIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRY 1371
            V+R GD+FFH+SEAP DV++ DE EF V  N+RS ++ AV+L +L  G++ +E +   +  G V + I  P G S + +  S         R ET   GLI +            +  +A  G++     + R V R  + ++       + D  GE  + +   GDEV  ++A  + +G+ + V   +  SA+ + E+E   +L+ +   + +   + S             V FP     E +G   + +    ++E   + F+   + D E     R    A+    LP    + E  I  DV G+V + P    K+PR G     +         A     S  G+  +     G   R   A        VGD ++ D V    S +++A NVRV +L     E G++  +++   FGFI+ +  S       + +F   DV   +++     EV +
Sbjct:  204 VDREGDIFFHMSEAPVDVELQDEVEFKVKYNQRSQKDIAVQLVRLPKGSIVWEDIAEEFVEGTVTKGI--PRGNSYHNSSSS---------RDET--HGLIEVR-----------RPEDAKSGEESGETLKRREVVRYTATSVA------SGDAEGENKKPVPHFGDEVRFRIATHRKSGQKRAVELTVTQSAKDKLEKEIDAKLQSMTREQGVVARVKSGGGFIRCCARQDDVYFPFHEIRESIGTETEKKSKLTLRESDEVSFYVYEEKDEEAGARSRGRLTALRVVKLPAGTVSFEDLIRSDVNGVVTKTP----KEPRTGPEVLGVINPTDDDVVAEIPSESPKGKSGLKKKKTGVSFRLSDAQDASYIPAVGDVVVFDQVMDKRSNRIKASNVRVTQLNPKNRETGVITAMKEE--FGFIRCAERS------GDAYFRFADVMSVSNDFRIGTEVAF 623
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A484E9J3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9J3_BRELC)

HSP 1 Score: 89.7 bits (221), Expect = 2.620e-14
Identity = 129/509 (25.34%), Postives = 213/509 (41.85%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSAR-------------IRREQEELKRLKH-------INAPRELYF-----------ALASVEFPEELGV----RDKAQGMSLI-KEGAPMEFWAV-AQADREGRPTWRAVGPKLL--PPSVAAAEAPIVCDVTGIVARPPTYSTKDPRPGTA--------RFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEECRGEGAVRVE--------VGDEILADLVKVCLSGQVRAKNVRVAKLKGPRME-GIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQIL 1413
            +ER GDLFFH+SEAP ++QV DE EF +  N+RS++E A +L  L  GT++ E +   ++ GIV + + +  GP    +R    +R  D R  E    GLI I +           +    EG+DE    +   V R  S +L  +    A   + E+  +   GDEV  ++A+ + TG  + +   +V+SAR             + RE   + R+K+          P ++YF           A+ +  + EE  V    R   +G  L+ +EG  + F+    Q D   R   R    ++L  P    + E  +  +V G+V + P    K+PR G              E E      A + +     + +    G+    +    +R          + D++  D V    +G V+A  V V +L     E G+++ ++  E FGFIK    S      S+ +F   DV   +  +    EV + +   ++     A R QIL
Sbjct:  167 LERDGDLFFHISEAPVEIQVHDEVEFQIKYNQRSDKEMACQLVALPKGTIQVEEISDDFYLGIVTKSLSL--GPHQGGSRGYSNNRDQDRRLREE--HGLIEIKTDKTEKETVTNDQDMTNEGEDERAQRKREFV-RFTSESL-SIKQDEARVSTNELPHV---GDEVRFRIAKHRKTGLRRAIEMVIVVSAREKLEKEIELELATLSREMGVVSRMKNGGGFIKCCERPVDIYFPFHEIRESDNEAMKAQGYCEESNVDEISRSNRRGKGLLLREGDEVSFYVYEVQEDDTSRSRSRLTALRVLKLPVGTVSFEQLLRSNVEGMVVKAP----KEPRNGPEIIGSIAIEPLSTEKEEERKQDAENEIDESENKQLKKKKGMKTLQKVAFHLRDTEDMSYVPYIDDKVAFDEVLDKRTGTVKAVKVHVVQLNQTNRECGVISAVK--EDFGFIKCVERS------SDAYFRFSDVMGASQNVSNGTEVAFDVFVDEKSDNIRATRLQIL 654
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: G4Z9V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9V3_PHYSP)

HSP 1 Score: 88.6 bits (218), Expect = 6.030e-14
Identity = 130/539 (24.12%), Postives = 209/539 (38.78%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPG---GPSAYQARKSHPDRAADFRRIETAYDGLIRITSA-----------VAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPEELGVRDKAQGMSL----------------IKEGAPMEFWAVAQADREG---RPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPP-------------TYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGRDIVPGLGLGEE-----CRGEGAVRV-EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 1455
            +ER GDLFFH+SEAP DVQ+ DE EF V  N+RS++E A +L  L  GT+K E V    + G+V + +   G   G   +  R        D  R +    GLI +  A            AA    E+ + EA     + +  +E +     S A++         G  + + +   GDEV  ++A+ + TG  + V   + +SAR + E+E   +L                    K  + P ++YF    +  PEE                            ++EG  + F+     + +    RP   A+  + LPP   + E  +  DV G+V++ P             T ++ +P  G    + +  A+  T    G  S   +    G    ++     C  E    V  + D+++ D V    +G+++A  VRV +L     E    N   +E FGFIK +  S       + +F   DV   +       EV + +    +     A R QIL       E    EG
Sbjct:  183 LERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSDELFDGVVTKSLPRGGHGGGRGFFNNR--------DDDRHQREEHGLIEVKKAPEQGEDAKAEETAATGDEEQTQEEADASPKKTLARREFVRFNSESVAVIEEKDDQEQTGRPKKNPIPHFGDEVRFRIAKHRKTGAKRAVDIIITVSAREKLEKEIEAKLETMTRETGVVDRVKNGGGFIKCCDRPVDVYFPFHEIREPEEXXXXXXXXXXXXXXXXXXXXXXXXKGPTLREGDEVSFFVYEDQEDDSARSRPRLTALRVQKLPPGSVSFEELVRADVEGLVSKLPKEPRNGPEVIGSITVASVEPSDGEKSEEAKDAAIETTPESEGKPSKKKKGN-NGKAKKQKVSFRLCDTEDMSYVPHIDDKVVFDEVLDKRTGKMKAVKVRVVQLNPKNRETGTINAM-KEDFGFIKCAERS------GDAYFRFSDVMGISRSYNNGTEVAFDVQVDNKSDHIRATRLQILPRGTVKWEDVAAEG 705
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BLAST of jgi.p|Trimin1|347862 vs. uniprot
Match: A0A6A4EEB2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EEB2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.040e-14
Identity = 129/528 (24.43%), Postives = 205/528 (38.83%), Query Frame = 1 
Query:   70 VERAGDLFFHLSEAPRDVQVGDEFEFVVGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRV---PGGPSAYQARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEEVVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKVTGRLKTVAARLVMSARIRREQEELKRL--------------------KHINAPRELYFALASVEFPEELGVRDKAQGMS----------------LIKEGAPMEFWAVAQADREG---RPTWRAVGPKLLPPSVAAAEAPIVCDVTGIVARPPTYSTKDPR-----------PGTARFQLEG-EALSATGAGSGVASFMGRDIVPGLGLGEE-----CRGEGAVRV-EVGDEILADLVKVCLSGQVRAKNVRVAKLKGPRME-GIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELVESMEVRYTLLAPKE-----AARAQILRFALADVEPALIEG 1455
            +ER GDLFFH+SEAP  VQ+ DE EF V +N+RS++E A +L  L  GT++ E +      G+V + +      GG   +  R     +  +   IE   +    + +A      AE+ E EA     +    +E +     S ALV         G  + + +   GD+V  ++A+ + TG  + V   + +SAR + E+E   +L                    K  + P ++YF    +  PE     D   G                   ++EG  + F+     + +    RP   A+  + LP    + E  I  DV G+V++ P      P            P  A    E  +A + T A S    +  +    G    ++     C  E    V  + D++  D V    +G V+A  VRV +L     E G +  L+D   FGFIK +  S       + +F   DV   +       EV + ++   +     A R QIL       E    EG
Sbjct:  195 LERDGDLFFHMSEAPVGVQLQDEVEFRVKLNQRSDKEMACQLVALPKGTIQVEELSDELVDGVVTKSLPRGGHAGGRGFFNGRDDDRHQREEHGLIEVKREAETEVEAA------AEQTEQEADAPLKKTRARREIVRFNSESVALVEDKDEQEQSGRPKRNPIPHFGDQVRFRIAKHRKTGAKRAVDITITVSAREKLEKEMEAKLATMTREMGVVDRVKNGGGFIKCCDRPVDIYFPFHEIREPEGGDTSDIKDGEQSEATDKPRRGRQGKGPTLREGDEVSFFVYEDQEDDSARSRPRLTALRVQKLPAGSVSFEELIRADVEGLVSKLPKEPRNGPEVIGSIAVASAEPTDAEMSEEAKDAATETTAESEGKPYKKKKGKDGKAKKQKVSFRLCDTEDMSYVPHIDDKVAFDEVLDKRTGNVKAVKVRVVQLNPKNRETGTINALKDD--FGFIKCAERS------GDAYFRFSDVMGTSRSFSNGTEVAFDVIVDTKSDHIRATRLQILPRGTVKWEDVAAEG 708
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347862 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A836CJ69_9STRA0.000e+0100.00CSD_1 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5L4Q3_9PHAE1.530e-2629.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3GWZ1_PHYRM1.990e-1826.20Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2QJD1_PHYPN1.700e-1727.47Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A0P1AQ30_PLAHL1.500e-1625.24Cold shock domain-containing protein e1 n=1 Tax=Pl... [more]
D7FPP6_ECTSI1.180e-1530.08CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8K1FLP7_PYTOL8.740e-1524.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484E9J3_BRELC2.620e-1425.34Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4Z9V3_PHYSP6.030e-1424.12Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A4EEB2_9STRA6.040e-1424.43Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:1136554..1150308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347862|estExt_Genemark1.C_Ctg_160128
BRITEko00000,ko00001,ko00536
KEGG Pathwayko04974,map04974
KEGG koko:K19721
GOsGO:0000003,GO:0000956,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0007275,GO:0007548,GO:0007549,GO:0008150,GO:0008152,GO:0008406,GO:0008584,GO:0009047,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0019439,GO:0022414,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034655,GO:0040029,GO:0042714,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045137,GO:0046483,GO:0046546,GO:0046661,GO:0046700,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070937,GO:0070966,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:2000112,GO:2000113
Preferred nameCSDE1
Descriptionnuclear-transcribed mRNA catabolic process, no-go decay
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs28K4H@1|root,2QSJ1@2759|Eukaryota
Evalue5.33e-37
Seed ortholog2880.D7FPP6
Hectar predicted targeting categoryother localisation
TranscriptId348184
TrackFilteredModels1
ProteinId347862
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347862gene_3050Tribonema minus UTEX_B_3156 geneContig_16 1136554..1150308 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3050_13exon_3050_13Tribonema minus UTEX_B_3156 exonContig_16 1136554..1137650 -
exon_3050_12exon_3050_12Tribonema minus UTEX_B_3156 exonContig_16 1138297..1138550 -
exon_3050_11exon_3050_11Tribonema minus UTEX_B_3156 exonContig_16 1138995..1139500 -
exon_3050_10exon_3050_10Tribonema minus UTEX_B_3156 exonContig_16 1140104..1140210 -
exon_3050_9exon_3050_9Tribonema minus UTEX_B_3156 exonContig_16 1140578..1140664 -
exon_3050_8exon_3050_8Tribonema minus UTEX_B_3156 exonContig_16 1144146..1144321 -
exon_3050_7exon_3050_7Tribonema minus UTEX_B_3156 exonContig_16 1144803..1145169 -
exon_3050_6exon_3050_6Tribonema minus UTEX_B_3156 exonContig_16 1145621..1145749 -
exon_3050_5exon_3050_5Tribonema minus UTEX_B_3156 exonContig_16 1147278..1147400 -
exon_3050_4exon_3050_4Tribonema minus UTEX_B_3156 exonContig_16 1148514..1148721 -
exon_3050_3exon_3050_3Tribonema minus UTEX_B_3156 exonContig_16 1149027..1149178 -
exon_3050_2exon_3050_2Tribonema minus UTEX_B_3156 exonContig_16 1149938..1150088 -
exon_3050_1exon_3050_1Tribonema minus UTEX_B_3156 exonContig_16 1150238..1150308 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3050UTR3_3050Tribonema minus UTEX_B_3156 three_prime_UTRContig_16 1136554..1137065 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3050CDS_3050Tribonema minus UTEX_B_3156 CDSContig_16 1150238..1150308 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347862Trimin1|347862|estExt_Genemark1.C_Ctg_160128Tribonema minus UTEX_B_3156 polypeptideContig_16 1137066..1150308 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3050 ID=mRNA_3050|Name=jgi.p|Trimin1|347862|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3428bp|location=Sequence derived from alignment at Contig_16:1136554..1150308- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAATCCGACAAAGATACTGGCAGGGGAAGGGGCGGCCGCGGTGGTAGG
GGAAGGGGCAGAGGCGCTGGTTGAGCGGGCTGGGGACTTGTTCTTCCATT
TGAGCGAGGCTCCCAGAGATGTGCAGGTTGGGGATGAGTTCGAGTTTGTG
GTCGGCATCAATGAAAGGTCCAACCGGGAGTGCGCTGTGCGGCTGGAGAA
GCTTGCCCCTGGCACAGTGAAGTTTGAGCGCGTTATACCGGGTTGGTGGG
CCGGCATTGTGGACAGGGACATCCGCGTTCCGGGCGGCCCCAGTGCCTAC
CAGGCACGCAAATCACATCCTGACAGGGCTGCTGATTTCAGGCGCATTGA
GACTGCCTATGATGGGCTGATAAGGATCACGAGCGCTGTGGCAGCAGCAC
CAGCAGCAGAGGAAAAGGAAGGCGAAGCAATGGAGGGGCAGGATGAGGAG
GTGGTGGAACAGGAGCGCATTGTGAACAGAATGGCCAGCTTCGCACTTGT
CTGCGTGCTGCCGGCGCCCGCTTTGGATGGCAGCGGGGAGGTGGACCAAC
TGCTGTCTAGGGGGGATGAGGTGGAGGTCCAGCTTGCTGAGGACAAGGTG
ACAGGGCGTCTCAAGACAGTGGCTGCGCGCCTGGTCATGTCTGCGCGCAT
AAGGCGGGAGCAGGAGGAGCTCAAGCGGCTAAAGCACATCAACGCACCGC
GCGAGCTATACTTTGCGCTAGCCAGCGTGGAATTTCCTGAGGAGCTGGGT
GTGCGAGACAAAGCCCAAGGCATGAGCCTCATTAAGGAGGGCGCTCCTAT
GGAGTTCTGGGCTGTTGCACAGGCAGATAGGGAGGGAAGGCCCACCTGGC
GCGCAGTTGGCCCCAAGCTCCTCCCCCCCTCCGTTGCCGCAGCAGAAGCC
CCCATAGTGTGCGACGTCACTGGCATCGTGGCCAGGCCACCCACCTACAG
CACCAAAGACCCCCGTCCCGGTACAGCCCGCTTTCAGTTAGAGGGCGAGG
CTCTGTCAGCCACAGGCGCCGGCAGCGGTGTGGCGTCTTTCATGGGGAGG
GACATAGTGCCGGGTCTGGGTCTGGGGGAGGAGTGCAGGGGGGAGGGGGC
GGTGCGTGTGGAGGTGGGGGATGAGATACTGGCTGATCTGGTCAAGGTGT
GCCTGTCGGGGCAGGTGCGGGCCAAGAACGTAAGGGTGGCCAAGCTCAAA
GGCCCTCGCATGGAAGGCATCGTCGCAAACCTGAGAGACAGGGAGGGGTT
TGGATTCATCAAGCCCTCCCACAACAGTCAGGGTGGTCTCAATGGCAGCA
ATGTCTTCTTCCACGTTGGAGACGTCTTCTATGGAGCCTCAGAGCTTGTG
GAGAGCATGGAAGTTCGCTACACACTGCTTGCACCTAAGGAGGCGGCACG
AGCACAGATCTTGCGCTTTGCGCTGGCAGATGTGGAGCCAGCGCTGATCG
AGGGCCCTATACAGGTGGGGGACACGGTAATGTTTGACCGCCTCCGCTGC
GACGGAGGCGTGCATGGCGATGGCTACAGGGCAGCCCATGTGGTGCTCAC
TAAGAAGGCCGCCAGGACCAGGGGCGTAGTGGTGGACGTCAACCACGACC
GCCACTTTGGCTTCCTCGTGTGCGCCGACACCACAGAGAGGCTCTTCTTC
CACCTCAGTGAGGTCATACCTCCCGCTCAGGAGCCCTCTTCAACTTCAAC
AAGCGACGCCCCGCAGCAGCAGCAGCAGCAGTCACGCGGGCCAGTGCCGC
ACAGGCGCAAACCCCCCCAGGCAGGGTCGGCTGTCGTTGGCAAAGGCCAA
GAGGTCTCCTTCACCATGGGCGTCAGGCACGGCAAGAATATTGGTCTGCA
GGTTCAGTGCCTGCCGAAGGGTACCATTCCCCCTGCCTTAGTGCTGCCCG
ACCGGTATCTGGGGGTCGTTGCAGAGGCGGCGAAGCCTGCGAATGAGGGG
CAGGCGGCGGGCGAGGGTGTTGTGGTGGTGCTGCAGCGAGTGGAGGGCAG
TGCTGGTGCTAGCGACGGCGATGGCAGCGTTGCCATGCCCAACGGCAGTA
CTCATCAAGACGAACAAGGGCATGGAGAGGTGCCCGGACAGCAGCAGCAG
CAGCAGCCAAGCGTGGCAAGTGCGCTGCACGTTCCCGCATTCAAGGTGCT
GCCACTCGACGCAGAAGCATGCGCGGAGACGCTGCAGAGGGGGCAGATTG
TGGAGCTGTCAGTGGTGTTCAGCTCAGGGGGAAAGGTCAAGGGTGGCAAG
GGGATTGTGACCGTAACAGCGGCAGATGTCAAACTGACGGACAAGGGCAC
CCTGCCCACCATGCGAGGGAAGGTCACAATGGTAGATGCCAAGCAGTCAA
TCTGCCACGTGCAGCGCACACCACCCGTGCCTGCACCTGCGCCCGTCGCC
GCTGACTCTGAAGCTGCGCCAGCTGACGCACCACCGCCACCACCGCCAGC
AACCTTGGCAACCTTAGCAGCAGCAGCAGCGCCTCAGCCATCCGTCAAAG
ACTTCTTCCACTGGAGTGACCTGCTGGATGCCTCTAGCCTGGGCCCCGTT
CGCGAACGAGACAATGTCGAGTACATCTGTGTCCCGCTGCCGCTGCCGGA
GCAGGGCCAGGGAGATCTGGCAATCACACCGGCGCCCGGCAGGGTGACAG
GTGTTGTGAGGGTGCGCGAGGCACGTGCCCTGCAGGGCAGCAGCCCAGCA
CCGAGGTCGGGGTTGAAGACGCACTTGGGGGGTACGCAGGTGCGCATGGC
CAAGGGGCCCGATGGCACTGCCGGGTTTGTGCCGGGGTGGCGCACGTCAG
CGGCTGGCGGTGATGATGCCGCAGTTGTAGTCGATGATGTAGTGGAGGAC
GCGGGGGCGGACGAGACTGCGGAGGAGGTAGGGGAGCAGGGGACGGGTGT
GGCGGAGCACGGGTGAAGCGCAAAGGGGCAGGGGGTTGCTGTTGAAGTTT
CATTTTGTCGCCGCCTTCCGCAGGCCCTGCTGCCATGAGGAGTCGCACCA
GCATGAGCAGAGGCAGCAGCGGCAGCAAAGGTAGTGATGGCAATTGTGGA
AGGGGCTGCATGCTCTGCCCGCCAGCGAATGTGGCACCACAACGGCAGCA
GTTTTTGCACAATGTCATGAGGAAGGGGGATTGGAGAGAGTTGTCTGAGT
GCATAAGCATATGCCGCAGTAATTGGCACAGGCACAGGCAAGCTCTCATT
GTGAGATGGCCATTGTTGACGTTGGCACAACAAGCGTGAATGAGATCAGG
GAGAGGGTGGCATTGAAGGTACACAGATGCAAGTGCGGCTGATGTTCACG
GGATGTAAGGCATATAGCCAGGCAATCAGCCGGAGGCACAGACGAGTTGG
CGTAATGACAGCGCACCTCACATGCTGATGGTCGCCACTACATGAGCCAT
CTGATGCTGCAATCGTGACTCGACTCCG
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protein sequence of jgi.p|Trimin1|347862

>Trimin1|347862|estExt_Genemark1.C_Ctg_160128 ID=Trimin1|347862|estExt_Genemark1.C_Ctg_160128|Name=jgi.p|Trimin1|347862|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=972bp
MNPTKILAGEGAAAVVGEGAEALVERAGDLFFHLSEAPRDVQVGDEFEFV
VGINERSNRECAVRLEKLAPGTVKFERVIPGWWAGIVDRDIRVPGGPSAY
QARKSHPDRAADFRRIETAYDGLIRITSAVAAAPAAEEKEGEAMEGQDEE
VVEQERIVNRMASFALVCVLPAPALDGSGEVDQLLSRGDEVEVQLAEDKV
TGRLKTVAARLVMSARIRREQEELKRLKHINAPRELYFALASVEFPEELG
VRDKAQGMSLIKEGAPMEFWAVAQADREGRPTWRAVGPKLLPPSVAAAEA
PIVCDVTGIVARPPTYSTKDPRPGTARFQLEGEALSATGAGSGVASFMGR
DIVPGLGLGEECRGEGAVRVEVGDEILADLVKVCLSGQVRAKNVRVAKLK
GPRMEGIVANLRDREGFGFIKPSHNSQGGLNGSNVFFHVGDVFYGASELV
ESMEVRYTLLAPKEAARAQILRFALADVEPALIEGPIQVGDTVMFDRLRC
DGGVHGDGYRAAHVVLTKKAARTRGVVVDVNHDRHFGFLVCADTTERLFF
HLSEVIPPAQEPSSTSTSDAPQQQQQQSRGPVPHRRKPPQAGSAVVGKGQ
EVSFTMGVRHGKNIGLQVQCLPKGTIPPALVLPDRYLGVVAEAAKPANEG
QAAGEGVVVVLQRVEGSAGASDGDGSVAMPNGSTHQDEQGHGEVPGQQQQ
QQPSVASALHVPAFKVLPLDAEACAETLQRGQIVELSVVFSSGGKVKGGK
GIVTVTAADVKLTDKGTLPTMRGKVTMVDAKQSICHVQRTPPVPAPAPVA
ADSEAAPADAPPPPPPATLATLAAAAAPQPSVKDFFHWSDLLDASSLGPV
RERDNVEYICVPLPLPEQGQGDLAITPAPGRVTGVVRVREARALQGSSPA
PRSGLKTHLGGTQVRMAKGPDGTAGFVPGWRTSAAGGDDAAVVVDDVVED
AGADETAEEVGEQGTGVAEHG*
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mRNA from alignment at Contig_16:1136554..1150308-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3050 ID=mRNA_3050|Name=jgi.p|Trimin1|347862|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13755bp|location=Sequence derived from alignment at Contig_16:1136554..1150308- (Tribonema minus UTEX_B_3156 )
ATGAATCCGACAAAGATACTGGCAGGGGAAGGGGCGGCCGCGGTGGTAGG
GGAAGGGGCAGAGGCGCTGGTGTCGGGGGGCCTGGCAGGATAAGCCAGCG
GTGGCAGCAACACAATGCTAGCATCGAAGTTGCTGCTGCAGGTCCGCCTC
GGCCTCCGGAGCGAGTCGAGCAAGGTCGTGTTGTGACCATCAGGGAGCAG
TTCGGCTTTCTGCGCTGCAGTGAGCGGGCTGGGGACTTGTTCTTCCATTT
GAGCGAGGCTCCCAGAGATGTGCAGGTTGGGGATGAGTTCGAGTTTGTGG
TCGGCATCAATGAAAGGTCCAACCGGGAGTGCGCTGTGCGGCTGGAGAAG
CTTGCCCCTGGCACAGTGAAGGTAACACATCACACAAACTAACAAGCAGT
ACGTACCAGAACATGCAGGCATCAAGCAATTCGAGGATGTACAGATTGGT
CGTTCCACTGCGTGCGAATTGCGAAAGGCTTGATGCTGGACAGAGCGCAA
TAACGGAGGATGCATGACTCGCCCTCCATTAGCTCGTTTCACGGACGCGA
ATAAGGTGTTGATGCAACAGCATTGCGCCACAACTTATTTGGGCTTGTGT
GTGACAAGATCAAGGTAATACGCAGTGTACAGATACATTGGCTCAGGAGC
GTTTGCATGTGTCTGATGAGTGAATTGCTGCAGCACTCACAAGTAGTTTG
CGCTGCTGACAACAGTCCATGTGCCAGCAGAATCACCATTATCATAGAAC
TATTGCACACACACATGACATGTCAATTGCATGTCAGATGTCGCACTGTG
TCTGACATGAGCGTGATTGTGCGTGGATGTCATCAGGCGACGGACTCAAC
AGTTGCATGTCATGTAAGATTAGAGACACATTGCATGTTGCTCTTGTAGG
GCACTTGAATACATCGGTCTGGAAATCACTCCTCAGCAGGGGTGTGCTGG
CAACATGGACACCATGTCAATAAACCTGCACCTCACCACACCTGTTTACG
TCATGGGATATGTATGCATGTATGTAAGGCATTGCTATACCTACCTACCC
AAGCCAGCCTGATGTACTTGGGCATGCATCCCACTGCCTGACTGTGCGAC
TGCGGTGCTCTCCTGCTGCCATTGTCACAGTTTGAGCGCGTTATACCGGG
TTGGTGGGCCGGCATTGTGGACAGGGACATCCGCGTTCCGGGCGGCCCCA
GTGCCTACCAGGCACGCAAATCACATCCTGACAGGGCTGCTGATTTCAGG
CGCATTGAGACTGCCTATGATGGGCTGATAAGGTAATGCAGCTCATGGCA
TAACATGTGTTGTGGTAGGCACGTGCCATACTGAGCCAGTGACGACGGTC
AAGCTCATGTGGCGTGATGCTTTGACATTGGCAGCTTGTTTGTATGCAGT
TGACATTCACATCTAGAGCATCAGGTGTGCAGTCATGAAAGGCATTTGAA
GCTGAGTGGTTGAGAGGCGGCACATGACGTGATGCGATGGCATTGTGATT
TGCACTGCGACAGGCACAGTTTTATCACCCTTGTTGCAAGGCATATGGGG
TGTTCAGTTCAAATATTGCATGCCCATGCTGGTGCAGGATCACGAGCGCT
GTGGCAGCAGCACCAGCAGCAGAGGAAAAGGAAGGCGAAGCAATGGAGGG
GCAGGATGAGGAGGTGGTGGAACAGGAGCGCATTGTGAACAGAATGGCCA
GCTTCGCACTTGTCTGCGTGCTGCCGGCGCCCGCTTTGGATGGCAGCGGG
GAGGTGGACCAACTGCTGTCTAGGGGGGATGAGGTGGAGGTCCAGGTGTG
TACATACATACATAGATACATATAAGTACTACACACACACGTGCGCCATA
GTCTACAATGGGACACTGCTGATGCCACCGACTGAGCGCTCACAAGTTGT
AACAGTTGAAGTTTCCATCTGGAACTTCAAGTCTTGCACAGCCTCTCACC
CCTGGCAGTTACAGGAACCTTGGCGCATGGTTAAAGAGAGCGCTGTGTGT
GCAAGTTGTGGACGTGTGCATGTTCCTTGAACCCACTGCAGGTCTTGACG
GATTTGACACACTCCCAGCTGATACCAACGTGAATTCAATACCATCAATC
TAGCGCCAGCTTCACAGAGAACCGTTCCTCACAATACATCACCAACTGCA
ATGCTGCCGTGACGCCAAATGGACTCACTGACGCCTCAAATTGTCTGTTC
AGAACCTCACACTGCCGGCCGTTTCATGTGACGAAGTAATGCTTCCGTTC
ATGCATTATTGTGTTGTTTGCAAAGCAGTAGTTTTGAGTTAGGATTGCCG
ATGCAGACACCATTGTGGGCAAGGGCCCCAGTCATTCTCAGCACTGCCAA
GATGCAGTCCGCCATCAAGTTGAGTACTACCTGGCACCATAATGAAATGC
TGATCGCCCATCAGAGGCTATGGTCCCCACCTGTAGGACGCCCTACAGTG
GGCCTGTAAATGCTCAGTTTTTGAGCCAGCACTTGTGTATATGCCACTGT
GCGGTATAGCATAGCCTTGACGAGCAGTATATGCTACCGAGCTGTTTGCC
ATAGCCTTGACGCGCAGTCTACTGCTATTGATAATTGCTACTGAGCACTG
GCTGTTCTAGCAGCCCCAACGCTGGGGAGTGCTTCGCATCGTACCAGCTA
GTACTGTACCTCTCAGTGCAGTGTACACACATGTACTCCATGTACCTACT
CACGTGATTCTGTTAACGGCCGCTGTTATTCTTGTTGACTTTGTCAAGCA
AGCATCAGTATATGTCATGGGGCAAATTGCTTGTTCTTTTACACAACAAC
TTCAAACTGTGGTGGTCCTGCTGTTCTTGATGCTCCATGTAGCTGGTCCG
CCTTGCTGTTTGTTGACTGACCCTGGTGCACTTGAATTTGTGTACTGCTG
CTTGGCAGCTTGCTGAGGACAAGGTGACAGGGCGTCTCAAGACAGTGGCT
GCGCGCCTGGTCATGTCTGCGCGCATAAGGCGGGAGCAGGAGGAGCTCAA
GCGGCTAAAGCACATCAACGCACCGCGCGAGGTGGGCACTTTAAACTCAC
AAGCTGTCATGCACAACTTGTCATTGTTTTGACAGATGTACGTGGCTACT
TAAACAGCGTCTCACATGTATGCTTGCAGAAGCAGGCAAATAAGTATTTT
GGAAGTACGTGACTGTGTGTGTGCAGATGTGCGGTGCATTGTTGAAGATG
GACAGGACTTGTTGAAGTAGGGGGCAATACGTGGGTCAAACACTTCATTC
AATGTAGCATCAAGTGTCCCAACAAACACAGGATGGCAAAGATAGAGCTG
GACCTTCTGTACAGCGGTCGATTGGTGAAGTCTGCAAGCTTGCAGCCAGA
GGCATGGGAGTACCACGCACGTTAATTGCATGCAGATTTGGATTTGTATG
AGAGTTGACCTTGCACCTTAAGTTCATGTGATCACAACAGTGGATGTACT
CAACGCGCATAAATAGTAATGGTGATGCAGTACTTGCACACTGACATGTG
CACTTCCATCTACCAGTACTCTTGTTGCGTCACGTCAAACACCGCAGGTA
TTGCAATCTACTCTTGCTGCAGCAGGGTTTGAATGTTGAGCAGACCTGTG
GTTGAACTTTGAAAAGTTGTTGAACTTCATTGCCTGACAACCACCCCCTC
AGCTTTTGGGACTACATTGCCGCTAACTCGTAACGCAGTTGGTAGCTACT
GTTGTCGACTTGCCAAGCTCAACCAACCACTTTTTTTTGTCATTGTGATC
CCTCAATGCGCGCTTCATGATGCACTGCGACTGCACCAGCTTGGTGAGAT
CCGGCGCGTGCATGGCGACTATGGTTTCATACAAGGAGTGGAGCGTCAGG
AACAGGTACAGCGCAGTAAGCTATCTGCCATCATGCGCACCACACGGTAC
ATGATCATGTCATGATGCATTGCGCTATACAGTCGTGCAACACACAGTAA
AGGTTTTCTATTGAACAACGGTTTCATGCAAGCGGGTGTCATGCATTGAG
CTTGCTCGCCTTCTTTCGTATTCTGTGCATTCACAGAAGTGCTGTGAACA
AGTGAACAGCAGCATGCAGGGTGCACTTGTTGTAGCTTTTTTACATTTTA
CTACTTGCAGACATCATCAGCAGTTCATTCTACACTGTTCCATTCAAAAG
CGTCAGCCATTCAAAAGCGTCAGCTGAGGGCTCTCTGTGTTCTGCAGAAC
GCCATCACCTCAGCATGCATGCATACTTCTCTGACTTGCTGTACGTTGGT
GTTTCAGATCTTTGAAGTTGAAGTTGCTGATAATCTGCCATGGTGCTGTC
AGGACTGTCAGGGTTGGTGATGTGCGATCAGAGATCTGCTTCACCTGCCG
CCGATGCTGAATGCCTTCTGTCTTGAAATTCATGATCATTTATATGTTCT
CCCAGACTACTCAACAACCCCCCCTCAACTGCCTAATACTGCCACCCATA
GGGTTGCAACTTGTCATGGAGGGATGCAGGCATGTGGTACTACACTACTG
TGATCACCCATGTGATGATGCGCGCCTTGTCATGTGCTCATGTATGCGCG
CCTGAGCAGCTATACTTTGCGCTAGCCAGCGTGGAATTTCCTGAGGAGCT
GGGTGTGCGAGACAAAGCCCAAGGCATGAGCCTCATTAAGGAGGGCGCTC
CTATGGAGTTCTGGGCTGTTGCACAGGCAGATAGGGAGGTCAGTGCTCAT
TTTCCGTCTATGCGCCGTTTGATGGGCTGGCGTTTTGCTCGTTTTACTGC
TGACACTAGCCCTGCCTCATCATCTGCACGCGCTGTATATTTATTGTTGG
CATCCATGCGTGCCTGAGGAATGTTGTAGCAAGCGCTGCGCAGGCTGTAC
ACATGTAAAGCCTCATCAGCATGGCTGTACAATGCGAGTGTGAGGCTCGC
CCCATGTTTACTCTGAAAGGTAATTGGGCAGTTGTGCATTGATGCGTGCC
TCAAGCATGTCCCTGTATACACGATGTGAGGTACATCGTCCACGTGCAGA
CAGTGCTCCACATCTACAAGCAAATCGCATCAGTCTCATGGTGCAATCAC
AGTTGAAGTGCAGCTGCCCATTGACATCACCATTCACGTCTATGTACATC
TCTCATGCTGTACCTGCCATTCCGTTCTCCTTACCACAGGGAAGGCCCAC
CTGGCGCGCAGTTGGCCCCAAGCTCCTCCCCCCCTCCGTTGCCGCAGCAG
AAGCCCCCATAGTGTGCGACGTCACTGGCATCGTGGCCAGGCCACCCACC
TACAGCACCAAAGACCCCCGTCCCGGTACAGCCCGCTTTCAGTTAGAGGG
CGAGGCTCTGTCAGCCACAGGCGCCGGCAGCGGTGTGGCGTCTTTCATGG
GGAGGGACATAGTGCCGGGTCTGGGTCTGGGGGAGGAGTGCAGGGGGGAG
GGGGCGGTGCGTGTGGAGGTGGGGGATGAGATACTGGCTGATCTGGTCAA
GGTGTGCCTGTCGGGGCAGGTGCGGGCCAAGAACGTAAGGGTGGCCAAGC
TCAAAGGTATGTGTTGCATGAAACTTTGTATACATGCTACTCACAAATAT
GTAGGTTGGGATCGGTTTAAAAGTGAGTATGCGTTGTGTCTTGAGCTTTG
CGCGCATATTCAGCACTGTCGTGCCGCGGAGAAGTGCCAATTGCCAAGTC
TACCTCTTTGTTGGTTGTCTTGGAGTGGTTACCGCCCCAGTGACTATATG
ATAGTGCTACGATGCATACATTCTTTGTTTGATTTTGTATTCGGGTGTTA
TACAATGAGGTCTGCCTGCCTCAGCATGTTCATCATTACAGTGTAGCAGT
GCACAGCATCCCGGGTGGGGTTGTCGCCACTGCACAGCCACATCCATTTA
CTTTTGTGCTGTGCAATCGTCAGCTGCGGCCTCATCAAGCCTTTGTCAAC
GGACCGCCTTGTACATACATGTAGCACTGCTGTTGGTGTTATTGAGGCTG
GTGTTGAGCACTGGTGTCACATGGTGTGTCACCGCAGGCCCTCGCATGGA
AGGCATCGTCGCAAACCTGAGAGACAGGGAGGGGTTTGGATTCATCAAGC
CCTCCCACAACAGTCAGGGTGGTCTCAATGGCAGCAATGTCTTCTTCCAC
GTTGGAGACGTCTTCTATGGAGCCTCAGAGCTTGTGGAGAGCATGGAAGT
TCGCTACACACTGGTGCGGTCAGATCGTCCATCTGACAACAAGCCCAGAG
CATCTCAGGTATGTGCGAGGTGTGATGTGAAGTGCTCAAATAAAAAAATT
GCCTTGAATATAGGGCTGACTCACAATATTGTCCCGAAGAGGTGGCTATG
TTGTACGTGTGGTGTTGTATGTGTGTACTACATGTGCTGTAATACCTTCT
GTATTGCTCACCTTCGTCGTCATCACATCATATGTACTGCACCTTCAAGC
GCACCGTGTCATATACCTCTTGTCGCCTTCTGGAATGCTTGCTGTACGAC
CATACTTGTGTGCCATCGCCATTGACCCTGCGAAGTTTCTACACTGAAAC
CACATTGCTCTTCAACCACTGGGCCTGCCATGCCGCCCTCTCTAAGTCAT
CATTCATTGCCATTTGTTGACATGCTTGCTGCATCTGTCTGTAAAGGTGG
AAGTTTTGCCTCGTGGCTCCATCAAATTGCTGGCTCACTCGGGCCCCAGG
CTGCTGCTCCACACGCGAGACACAGCAGTTGGCTCGCCACAAGAGCAGAG
CTCACCAGCTAATGCTAATATGCAGCGGGGCATACCCGCGCGGGGCACAA
AGACATCCCTTGGCCCCTCCAAAGGTATGCAGACATTGCAGCGCGTGCGC
ATGCATATAGTATGCATATGTAGTACGTATGAACTGCTTTAGCTTAGTCT
AGCGCAATCACTCTTTATAGTAGTAGTCGTTTCTTTTGTTACAGAGAGCA
GCAAGGTGCAAGTTGTTCATCGACCCAGGGCCTTCAGTGTGGTGAAATCA
CATGTGCGTGTATGTTGGTTGTCACAGGGGCAGCTGTACCAGCCTTAAAA
TAAGCTCATTTCATAACGTGTATACATGCCAACATATGATTTGTTGCCAT
CAGTTCATGACAAACGTGTTGTCTGCCCCCAAACTCAGGTCAACGTGTTG
CCTCCGTTCCATAGCTCTGATTTCAAGCGCAATCGGACAGTGAGATAGAT
GCCTACATGCATGTTATGTGTTCGTGCCACCACCACATGAGCCATACCAC
ACTGACATTAAGCACTTCACTGTGCACTTTTGTCAAGTTGTGGCACACCC
CGTTGTTGGTTATGCTGGCCAGTTGCAGTATGCATATGCATTACCTATAG
TAATGTTGGCTGTTATGATGGGGCTAACATCGGTTGAGTAACTGCGTGCA
GTCAATTGTTGTCATGCTGGTTCCGCCACATGACATTCGCATTGCATTCA
CTTATGGGTACGCATATGATGGTGAGTCTACATACTTCAGAAGTATCATT
TTGACGCTGTGTACTCACCAAACGAATGCGGTTGGCTGACTGAATCATTT
GCCATCGTGATCATGGTGCAGAGGCAGTGAGGCGCATGGTGGGCATGGTT
GTTAGGGAGGCCAGGCTGGCACCACCACAGCTGGGCTCCATCGAGGTGCT
CCCAAGTGACCAGCAGGCACAGGCACCACCGCAGCAGCAACAGCAGCCTG
CAGACACTCTAGCCGAAAGGCAGAAGGCTCTCAAGGCAAGCACAAGGCAT
CAATCTTGTTTTCAGCATGGGTGTGGTGATACATATGAGCATGTCCTGTT
GTGTGTCCTTATTGTTGTTGGGCAGCCCAGCGTACACTTGCTGTTGGGTG
CTCAGCCAATGGGAAGACAACAAGCAAAATGAATACCAGCAACTGGCGGT
CATGCTGCATCACGATCACTCATCAATGTTAACAGTTGCCATGTAATTGC
CAAGGAGTACTCACGAACTGCAATGCCTGCATCGCTGAACATGCATACTG
ATTACCGTGCTGCGCATTGACATGTAATTGCCACCCATTGCCATTGCCAT
ACCCACCTACATGGACATGAATTACTCTGTGTGACATGTGTTCTGCAGGC
AGCTCGCTCGGCGGTCAGTGGACCGGGCTTGACACTGTACAATACCGCTG
TGTGCCACAAAGGCATTTTTGTGCTGGACGCATAGTTGGTGTACAACAGC
ATTGCCGTGACAAGCAACATCATCAACTACCCCTCTCAGGAAACATCTGA
CCAACTAATGTACCCCCCCCACCTCTCCCCATGACAGGCAAGCTTCCCTG
ACTTGCATGCCAAGATCACAGCACTCGCAGCTGGCGAAGCTGGCAGTGAG
CTCATGTTCCCTGCGTCAATGGGGGTCAAGCAATGGTCTGCGCTGCATGA
GCTGGCCAGTGCAGCAAGGTTAGGACACACGGCCTCTGGGAACACAGACA
CAGGCAAGCTACTAGTGTTTGATGACGCTACTGCTTTGGTAACTTAAAGG
CTGTGTTGTCTTTTGCTTTTTTGCAGAGTCTATCCAACATTTGCTGAGGA
AATATTTGTACTCCAAGTATGACTGGAACGGGGGGTGTTATGGGGGGTTA
CACACATGTTGAACTCAGCACCGCCTCTGCCTGCTTGTGCTGGGCTGATC
CTGTTGTCCCTGCACATGCTGTGCAGCAAGTGTGCTTGCAAACGCGCAGC
ACTGGGTAAAGGCAGCACAGCAAAGTGCATGCTGGCAGTCCAGTGACGCC
AGGTGTTGAAGAGCAACTTGAAGTGCTACTCTTCGTCATTGTACTCATTC
ATCCATGCATCGAGCTGTCATTGCAAGCCGAAGATTTTTTGCTTCCTGTG
CTTTTATATCCGAACCGCCGTAATAAGCGTAATTGCACTTTGATCATTCG
CAGCCCCAAGCCAACAGCGGCATGTGCACCAGTGATTTTTTGCAGGTAAC
GTGTATCCATCTATTAATCATGGCAGCTTCATGTCAGTTTTCCAGGAGCC
ATGCAGCGACGAGATCCTGTCAAATTATTTCTAGTCCAGCGTGACCTTCA
AGGCTTGCTTGACTTGGAGTGAGTAATCGCACACTCAAGCAACAGCGCTC
AAATGCTCTCACCACCTCGCCATCTACACAGCTGGCGCACGCCATCAGCT
CAGGATCTGGAAAGCCAGAGACGAAGCAGATCAGCAGGCAATTGACGAGG
CCGATGCCAAGTGGCGTGCTGCAAAAGAGGCAGGTGCAGGTGCTGGCCAC
CTAGCTACTGCGGTCACCAATGGGGCGGCGTCACAGGTGTGCACTGCTTG
CGGACCTTTTAACTTAGCTTTCCCTGTTGAAAGGGAGCTAGCTATCTGCG
CTGCGCAATGTCGCTGTATAGTGCCCACCTTCAAGCTCTTGCTGGATTAA
ACGTATTATCTCCTGTCAAGCACTCCGGTGCACATGCGCAGAGACGCATC
ACATAACAAACTTTAACGAAAAGCTGTGAGCGTCCACCAGTGGCTGTACA
GTTTATTCACTCATCATGTGTTGGGCAGATTCTTGGTGTTTTAGTCTTTG
GATTGTGGTAGAAGTATGTGTAGTCGGTGTGCGTCTGCATCCTGTACTGA
TTGGTGATGACTTTGATGATGCCACTATGTTGCAAGAAAAAATGCCACTC
ACCGCTCAGCAACTCTTCCTTCCGTACGCGTGCCTCTCATGCAGCTTGCA
CCTAAGGAGGCGGCACGAGCACAGATCTTGCGCTTTGCGCTGGCAGATGT
GGAGCCAGCGCTGATCGAGGGCCCTATACAGGTGAGCACTGCTGCTGTGG
GCTCGCAGGAAATACCACCACCTAAGCTGAGCATTGCTGCGCTGGCAATA
TGTTACCTCAACTCAACCTTTTGACTGTCTTGGAGAGGGTATCTTTTGAA
GGGTTTGCCTGGCACCTACAGGCCGTGCACAGCAGGCGTAAGCCTCCGAG
GCATGCACTTTAAGACACCAAGTAGCACACACACAAGTTGGCAGCAGATG
CGCCATGGCCACGTCTCTCGGTTGCTGTCACATGGATGAATGGTCCATGC
TTCACACATTGGCGCATGTTTGTATGCATTTCGAGACGTTGAGGTTGGTT
GCTGCTGTTGCTGACTTGCTCAATGATGTTGATGAAAATGGTGCTCAGGT
GGGGGACACGGTAATGTTTGACCGCCTCCGCTGCGACGGAGGCGTGCATG
GCGATGGCTACAGGGCAGCCCATGTGGTGCTCACTAAGAAGGCCGCCAGG
ACCAGGTACAGCAACAATTGCATGTGCCTCGATGATGCACCACCATGTGA
TCTTCAAGTGTGATCTTCAAGTTTGATCCTCAAGTAACTGGCGTTAATCG
CTCAGGTCATTGTACTTCTTATTTCTCCTGCAGTGTGGTTTTATCCATGG
ACACGGTTGGAGGTCAACTGCACCGGACATTTGCAACTTGTTGATCGAGC
ACTTCATCGGCACTTTCTCACTTTGCTCCATGCAATTGCCCGCCACAGGA
GTTTTTTTTCACCACGACCTTCTAGTCTAGTCTAAATCCATCCGCTGTTG
CTGACATGTTTGCATTGTTTGTACACAGCACAGATTCATATTTCACGAGT
AACATATTGCATGACCTAGCAGGCTTTATGAGCACAATGTGGCAGCCGCT
GTGCTGCAGCCCTGTCTGCGTCCTGATGATGTGCAACCGCTGACTTGGCC
ATTGCATTGTGGACCGATCGATGTTATATGCTGGGTGAGGCCATTTGCCA
AATGGCTGAACTAAGCTCACAGAATGTGCTGACCGCTGTCTCTATGCTGA
GCTCTCATAACCACACGCGATCACGCGCACTCCACTGCAATGCTTTCCCC
GCTGGCAGGGGCGTAGTGGTGGACGTCAACCACGACCGCCACTTTGGCTT
CCTCGTGTGCGCCGACACCACAGAGAGGCTCTTCTTCCACCTCAGTGAGG
TCATACCTCCCGCTCAGGAGCCCTCTTCAACTTCAACAAGCGACGCCCCG
CAGCAGCAGCAGCAGCAGTCACGCGGGCCAGTGCCGCACAGGCGCAAACC
CCCCCAGGCAGGGTCGGCTGTCGTTGGCAAAGGCCAAGAGGTCTCCTTCA
CCATGGGCGTCAGGCACGGCAAGAATATTGGTCTGCAGGTTCAGTGCCTG
CCGAAGGGTACCATTCCCCCTGCCTTAGTGCTGCCCGACCGGTATCTGGG
GGTCGTTGCAGAGGCGGCGAAGCCTGCGAATGAGGGGCAGGCGGCGGGCG
AGGGTGTTGTGGTGGTGCTGCAGCGAGTGGAGGGCAGTGCTGGTGCTAGC
GACGGCGATGGCAGCGTTGCCATGCCCAACGGCAGTACTCATCAAGACGA
ACAAGGGCATGGAGGTGAGTCTTGCAGTGTGAAATCTTCAAGTGTGACAT
CATAATACTGTAGAGCTCTGCGACAGTTGAACAGTACAGTGCCAAGGATG
CAAGGTTGCAGATGTGTGCAGCGGATCTGTTCCATAATATGTGGCATGCA
TAGCTGCAACCACAGCACGCCTGTGGCAGCTGTTGGAATCCCTCACCAGG
CGACACCTGCTGCACACGCCTGGGAAACGGAACTTGGCGTGTCGCATTGT
CATACTGGCAGCTCCACCAGCTCACTTGCGAGCTGATAGTGTTCTCTCGA
GGTAGCTTGGTGTGTGCGTCATGAGTTAACCTACTTCGTAAGACGATCGT
GCACTCCGCACACGTCCACAGAGAGCACCATCACACATTCACTACATTTT
CTGCTCTACTCACCAGTGCGCATACGCAACCCGTCGCCATTGCTCTCAAA
CACAACAGAGGTGCCCGGACAGCAGCAGCAGCAGCAGCCAAGCGTGGCAA
GTGCGCTGCACGTTCCCGCATTCAAGGTGCTGCCACTCGACGCAGAAGCA
TGCGCGGAGACGCTGCAGAGGGGGCAGATTGTGGAGCTGTCAGTGGTGTT
CAGCTCAGGGGGAAAGGTCAAGGGTGGCAAGGGGATTGTGACCGTAACAG
CGGCAGATGTCAAACTGACGGACAAGGGCACCCTGCCCACCATGCGAGGG
AAGGTCACAATGGTGAGCGAGCGTGGTCAATGCACGTATATGGAGTGTTT
GCTTCATGAGCAAATCTGCTTTACAGCTCTGTTACGATTGTGACGAGCTT
TGTGTTTTCTGCTGCATTTGTGCACAACGCTAGCAGTGACGAAGCAGCAG
CTGGTGCGGCAGCACTCACCTGTCCTCAACAGCAGCTCTCTCATGTACTT
CTTTTGAAGTACGTGTTATGCAGCAGCATTAGTTGAGCTGAGCTGACTGA
CCTGTCCTGCAGCAGTGCTCAACCATGCTCCAGCAACACTCAGCACGCGC
TGGTCGTGAATGCCACACAGATGTGACCAATACCCTACCAGCCTGGCTGC
TTGTCTGTCACCGGCTGACCCATACATGTACTGCGCCATGGCATTTTGAC
GTGCAATCATTGCTGAGCAGCATGGCTGCAGAGGCCTTGCAGATCACGAG
CTGTGACCACTGCTGTCATGGCCACGTGTTCTCTAGGGTCAACCCCCTGC
TGCCAGTGTCATGTTAAAAGCTTCTCGCATTCATGAAGCCTCTCACCATG
ATGCTGTACCAACTTGACCACTGAAACTGGCGCACTACAACAGTGCTCTA
GCAAACCCTGACATGCACTCGCTGCGTGCTTGCATGCCAATGCTGCTGCA
TCCTGCAGGTAGATGCCAAGCAGTCAATCTGCCACGTGCAGCGCACACCA
CCCGTGCCTGCACCTGCGCCCGTCGCCGCTGACTCTGAAGCTGCGCCAGC
TGACGCACCACCGCCACCACCGCCAGCAACCTTGGCAACCTTAGCAGCAG
CAGCAGCGCCTCAGCCATCCGTCAAAGACTTCTTCCACTGGAGTGACCTG
CTGGATGCCTCTAGCCTGGGCCCCGTTCGCGAACGAGACAATGTCGAGTA
CATCTGTGTCCCGCTGCCGCTGCCGGAGCAGGGCCAGGGAGATCTGGCAA
TCACACCGGCGCCCGGCAGGGTGACAGGTGTTGTGAGGGTGCGCGAGGCA
CGTGCCCTGCAGGGCAGCAGCCCAGCACCGAGGTCGGGGTTGAAGACGCA
CTTGGGGGGTACGCAGGTGCGCATGGCCAAGGGGCCCGATGGCACTGCCG
GGTTTGTGCCGGGGTGGCGCACGTCAGCGGCTGGCGGTGATGATGCCGCA
GTTGTAGTCGATGATGTAGTGGAGGACGCGGGGGCGGACGAGACTGCGGA
GGAGGTAGGGGAGCAGGGGACGGGTGTGGCGGAGCACGGGTGAAGCGCAA
AGGGGCAGGGGGTTGCTGTTGAAGTTTCATTTTGTCGCCGCCTTCCGCAG
GCCCTGCTGCCATGAGGAGTCGCACCAGCATGAGCAGAGGCAGCAGCGGC
AGCAAAGGTAGTGATGGCAATTGTGGAAGGGGCTGCATGCTCTGCCCGCC
AGCGAATGTGGCACCACAACGGCAGCAGTTTTTGCACAATGTCATGAGGA
AGGGGGATTGGAGAGAGTTGTCTGAGTGCATAAGCATATGCCGCAGTAAT
TGGCACAGGCACAGGCAAGCTCTCATTGTGAGATGGCCATTGTTGACGTT
GGCACAACAAGCGTGAATGAGATCAGGGAGAGGGTGGCATTGAAGGTACA
CAGATGCAAGTGCGGCTGATGTTCACGGGATGTAAGGCATATAGCCAGGC
AATCAGCCGGAGGCACAGACGAGTTGGCGTAATGACAGCGCACCTCACAT
GCTGATGGTCGCCACTACATGAGCCATCTGATGCTGCAATCGTGACTCGA
CTCCG
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Coding sequence (CDS) from alignment at Contig_16:1136554..1150308-

>mRNA_3050 ID=mRNA_3050|Name=jgi.p|Trimin1|347862|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2916bp|location=Sequence derived from alignment at Contig_16:1136554..1150308- (Tribonema minus UTEX_B_3156 )
ATGAATCCGACAAAGATACTGGCAGGGGAAGGGGCGGCCGCGGTGGTAGG
GGAAGGGGCAGAGGCGCTGGTTGAGCGGGCTGGGGACTTGTTCTTCCATT
TGAGCGAGGCTCCCAGAGATGTGCAGGTTGGGGATGAGTTCGAGTTTGTG
GTCGGCATCAATGAAAGGTCCAACCGGGAGTGCGCTGTGCGGCTGGAGAA
GCTTGCCCCTGGCACAGTGAAGTTTGAGCGCGTTATACCGGGTTGGTGGG
CCGGCATTGTGGACAGGGACATCCGCGTTCCGGGCGGCCCCAGTGCCTAC
CAGGCACGCAAATCACATCCTGACAGGGCTGCTGATTTCAGGCGCATTGA
GACTGCCTATGATGGGCTGATAAGGATCACGAGCGCTGTGGCAGCAGCAC
CAGCAGCAGAGGAAAAGGAAGGCGAAGCAATGGAGGGGCAGGATGAGGAG
GTGGTGGAACAGGAGCGCATTGTGAACAGAATGGCCAGCTTCGCACTTGT
CTGCGTGCTGCCGGCGCCCGCTTTGGATGGCAGCGGGGAGGTGGACCAAC
TGCTGTCTAGGGGGGATGAGGTGGAGGTCCAGCTTGCTGAGGACAAGGTG
ACAGGGCGTCTCAAGACAGTGGCTGCGCGCCTGGTCATGTCTGCGCGCAT
AAGGCGGGAGCAGGAGGAGCTCAAGCGGCTAAAGCACATCAACGCACCGC
GCGAGCTATACTTTGCGCTAGCCAGCGTGGAATTTCCTGAGGAGCTGGGT
GTGCGAGACAAAGCCCAAGGCATGAGCCTCATTAAGGAGGGCGCTCCTAT
GGAGTTCTGGGCTGTTGCACAGGCAGATAGGGAGGGAAGGCCCACCTGGC
GCGCAGTTGGCCCCAAGCTCCTCCCCCCCTCCGTTGCCGCAGCAGAAGCC
CCCATAGTGTGCGACGTCACTGGCATCGTGGCCAGGCCACCCACCTACAG
CACCAAAGACCCCCGTCCCGGTACAGCCCGCTTTCAGTTAGAGGGCGAGG
CTCTGTCAGCCACAGGCGCCGGCAGCGGTGTGGCGTCTTTCATGGGGAGG
GACATAGTGCCGGGTCTGGGTCTGGGGGAGGAGTGCAGGGGGGAGGGGGC
GGTGCGTGTGGAGGTGGGGGATGAGATACTGGCTGATCTGGTCAAGGTGT
GCCTGTCGGGGCAGGTGCGGGCCAAGAACGTAAGGGTGGCCAAGCTCAAA
GGCCCTCGCATGGAAGGCATCGTCGCAAACCTGAGAGACAGGGAGGGGTT
TGGATTCATCAAGCCCTCCCACAACAGTCAGGGTGGTCTCAATGGCAGCA
ATGTCTTCTTCCACGTTGGAGACGTCTTCTATGGAGCCTCAGAGCTTGTG
GAGAGCATGGAAGTTCGCTACACACTGCTTGCACCTAAGGAGGCGGCACG
AGCACAGATCTTGCGCTTTGCGCTGGCAGATGTGGAGCCAGCGCTGATCG
AGGGCCCTATACAGGTGGGGGACACGGTAATGTTTGACCGCCTCCGCTGC
GACGGAGGCGTGCATGGCGATGGCTACAGGGCAGCCCATGTGGTGCTCAC
TAAGAAGGCCGCCAGGACCAGGGGCGTAGTGGTGGACGTCAACCACGACC
GCCACTTTGGCTTCCTCGTGTGCGCCGACACCACAGAGAGGCTCTTCTTC
CACCTCAGTGAGGTCATACCTCCCGCTCAGGAGCCCTCTTCAACTTCAAC
AAGCGACGCCCCGCAGCAGCAGCAGCAGCAGTCACGCGGGCCAGTGCCGC
ACAGGCGCAAACCCCCCCAGGCAGGGTCGGCTGTCGTTGGCAAAGGCCAA
GAGGTCTCCTTCACCATGGGCGTCAGGCACGGCAAGAATATTGGTCTGCA
GGTTCAGTGCCTGCCGAAGGGTACCATTCCCCCTGCCTTAGTGCTGCCCG
ACCGGTATCTGGGGGTCGTTGCAGAGGCGGCGAAGCCTGCGAATGAGGGG
CAGGCGGCGGGCGAGGGTGTTGTGGTGGTGCTGCAGCGAGTGGAGGGCAG
TGCTGGTGCTAGCGACGGCGATGGCAGCGTTGCCATGCCCAACGGCAGTA
CTCATCAAGACGAACAAGGGCATGGAGAGGTGCCCGGACAGCAGCAGCAG
CAGCAGCCAAGCGTGGCAAGTGCGCTGCACGTTCCCGCATTCAAGGTGCT
GCCACTCGACGCAGAAGCATGCGCGGAGACGCTGCAGAGGGGGCAGATTG
TGGAGCTGTCAGTGGTGTTCAGCTCAGGGGGAAAGGTCAAGGGTGGCAAG
GGGATTGTGACCGTAACAGCGGCAGATGTCAAACTGACGGACAAGGGCAC
CCTGCCCACCATGCGAGGGAAGGTCACAATGGTAGATGCCAAGCAGTCAA
TCTGCCACGTGCAGCGCACACCACCCGTGCCTGCACCTGCGCCCGTCGCC
GCTGACTCTGAAGCTGCGCCAGCTGACGCACCACCGCCACCACCGCCAGC
AACCTTGGCAACCTTAGCAGCAGCAGCAGCGCCTCAGCCATCCGTCAAAG
ACTTCTTCCACTGGAGTGACCTGCTGGATGCCTCTAGCCTGGGCCCCGTT
CGCGAACGAGACAATGTCGAGTACATCTGTGTCCCGCTGCCGCTGCCGGA
GCAGGGCCAGGGAGATCTGGCAATCACACCGGCGCCCGGCAGGGTGACAG
GTGTTGTGAGGGTGCGCGAGGCACGTGCCCTGCAGGGCAGCAGCCCAGCA
CCGAGGTCGGGGTTGAAGACGCACTTGGGGGGTACGCAGGTGCGCATGGC
CAAGGGGCCCGATGGCACTGCCGGGTTTGTGCCGGGGTGGCGCACGTCAG
CGGCTGGCGGTGATGATGCCGCAGTTGTAGTCGATGATGTAGTGGAGGAC
GCGGGGGCGGACGAGACTGCGGAGGAGGTAGGGGAGCAGGGGACGGGTGT
GGCGGAGCACGGGTGA
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