mRNA_13895 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353381
Unique Name	mRNA_13895
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A835ZE40_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE40_9STRA)

HSP 1 Score: 834 bits (2154), Expect = 1.160e-294
Identity = 706/706 (100.00%), Postives = 706/706 (100.00%), Query Frame = 1

Query:    1 MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGPAVAQEEEYCKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASXXXXXXXXXXXXXXXXXXXXXXXXXXDGERQRSLEDLLQAFGPPDLLARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGLGNDIPETEIEQLMLAIQLSLQDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSSXXXSPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPXXXXXXXAMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMXXXXXXXXXXXXXXXXXXXXXXQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSXXXXXXXXXAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSPPRPMSA 2118
            MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGPAVAQEEEYCKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASXXXXXXXXXXXXXXXXXXXXXXXXXXDGERQRSLEDLLQAFGPPDLLARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGLGNDIPETEIEQLMLAIQLSLQDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSSXXXSPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPXXXXXXXAMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMXXXXXXXXXXXXXXXXXXXXXXQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSXXXXXXXXXAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSPPRPMSA
Sbjct:    1 MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGPAVAQEEEYCKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASXXXXXXXXXXXXXXXXXXXXXXXXXXDGERQRSLEDLLQAFGPPDLLARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGLGNDIPETEIEQLMLAIQLSLQDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSSXXXSPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPXXXXXXXAMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMXXXXXXXXXXXXXXXXXXXXXXQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSXXXXXXXXXAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSPPRPMSA 706

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A836CNS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.690e-29
Identity = 93/103 (90.29%), Postives = 96/103 (93.20%), Query Frame = 1

Query: 1018 LARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGL 1326
            LARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIR+AA+GSAVRQAQEAMRTAT XXXXXXXXXXXXXXXXX    PAARRDGGS+WQ  VGL
Sbjct:   26 LARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRNAAVGSAVRQAQEAMRTATAXXXXXXXXXXXXXXXXX----PAARRDGGSKWQRRVGL 124

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A835Z3B9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.200e-21
Identity = 60/113 (53.10%), Postives = 69/113 (61.06%), Query Frame = 1

Query:   10 DPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQA 348
            +PD+ AEECPICFM     NTT      +       C               TEC+LQL+PPR  VDCPFCNS  FAV+YSGPLS  E+ RRL EEQ VIEA+IRAARE A+A
Sbjct:   56 NPDDGAEECPICFMFCHATNTTVCCGKPL-------C---------------TECYLQLRPPRVCVDCPFCNSGSFAVSYSGPLSADEKHRRLQEEQRVIEAKIRAAREEAEA 146

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: D8LDS6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.010e-14
Identity = 49/103 (47.57%), Postives = 62/103 (60.19%), Query Frame = 1

Query:   28 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAARE 336
            EECPICFM Y GVN T   A  +       C               TEC+LQ++PPR+SV CPFCN ++F+V Y GP S+ +RE+R+ EEQ  IEARI A +E
Sbjct:  133 EECPICFMHYHGVNRTTCCAKPL-------C---------------TECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSEEDREKRMAEEQRTIEARIHAEQE 213

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A6H5L120_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L120_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.040e-13
Identity = 47/103 (45.63%), Postives = 60/103 (58.25%), Query Frame = 1

Query:   28 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAARE 336
            EECPICFM Y GVN T   A  +       C               TEC+LQ++PPR+SV CPFCN ++F+V Y GP S  + ++R+ EEQ  IEARI A +E
Sbjct:  130 EECPICFMHYHGVNRTTCCAKPL-------C---------------TECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSKEDHDKRMAEEQRTIEARIHAEQE 210

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: UPI001C5293DD (E3 ubiquitin-protein ligase DA2-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C5293DD)

HSP 1 Score: 68.9 bits (167), Expect = 2.120e-9
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 1

Query:   28 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQ 345
            EECPICF+ Y  +N +              C ++G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR  R+  Q
Sbjct:   57 EECPICFLYYPSLNRSR-------------CCMKGIC---------TECFLQMKPPHSTRPTQCPFCKTSSYAVEYRGMRSKEEKGMEQVEEQRVIEAKIRKRRQELQ 142

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A0K9PEV9_ZOSMR (RING-type domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PEV9_ZOSMR)

HSP 1 Score: 70.1 bits (170), Expect = 6.160e-9
Identity = 40/101 (39.60%), Postives = 54/101 (53.47%), Query Frame = 1

Query:   28 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIR 324
            EECPICF+ Y  +N +              C ++G           TEC+LQ++PP +S    CPFC +S +AV Y G  S  ER +  +EEQ VIEA+IR
Sbjct:   59 EECPICFLHYPSLNRST-------------CCMKGIC---------TECFLQMQPPHSSRPTQCPFCKTSNYAVEYKGMKSKEERGKEQLEEQRVIEAKIR 137

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A4Y7JVI1_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JVI1_PAPSO)

HSP 1 Score: 68.6 bits (166), Expect = 2.060e-8
Identity = 44/108 (40.74%), Postives = 56/108 (51.85%), Query Frame = 1

Query:   16 DESA---EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIR 324
            DESA   EECPICF+ Y  +N +              C  +G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR
Sbjct:   50 DESAFDLEECPICFLYYPSLNRSR-------------CCTKGIC---------TECFLQMKPPHSTRPTQCPFCKTSNYAVEYRGMRSKEEKGMEQVEEQRVIEAKIR 135

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: UPI001CC763B9 (E3 ubiquitin-protein ligase DA2L-like isoform X1 n=4 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC763B9)

HSP 1 Score: 68.2 bits (165), Expect = 2.570e-8
Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 1

Query:   28 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIR 324
            EECPICF+ Y  +N +              C ++G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR
Sbjct:   57 EECPICFLYYPSLNRSR-------------CCMKGIC---------TECFLQMKPPHSTRPTQCPFCKTSNYAVEYRGMRSKEEKGMEQVEEQRVIEAKIR 135

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A200PYW1_9MAGN (Uncharacterized protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PYW1_9MAGN)

HSP 1 Score: 68.2 bits (165), Expect = 2.600e-8
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 1

Query:   28 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQ 345
            EECPICF+ Y  +N +              C  +G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR  R+  Q
Sbjct:   57 EECPICFLYYPSLNRSR-------------CCTKGIC---------TECFLQMKPPHSTRPTQCPFCKTSNYAVEYRGMRSKEEKGMEQVEEQRVIEAKIRMQRQELQ 142

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A836CL70_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL70_9STRA)

HSP 1 Score: 2063 bits (5346), Expect = 0.000e+0
Identity = 1069/1069 (100.00%), Postives = 1069/1069 (100.00%), Query Frame = 1

Query:    1 MASWVVGIDTDLDTAINAISPATTQTELIAAMLQLMDALATPAGASRLSKLAAADDAEYLAIDQKASQMRQALFELDYRHYVLAPAKPVRRTEATRHARTRQRSLKASESCEATGILEGGDGSGITSLIQGVNGDRIKCLAKGDCEDAQQDREACAGSECCAPPIPEIPFLEVCLSGELCVPIPTINTVTGKRDLCGLSPSSLNTLALLNVAMSHDKCISDIQAVLADKGLHRALASGVTVKVAASMCLNVEEFVKSAPGLSEDSAEPITKALEYLNIDTCIISANVVYHPLTGFLTFELNINGGVIALYVGVETQMYDDLKDKWGLCEGLADADCGDAKGAECCQMCAGENRGLVSMAVGLLFVGDQLTTLETLKEDGLRRXXXXXXXXXXXSGGRAAAWTSHNYPHDTRRLSFWDDLVGVANTIKEEVIQPAADFVVDEEVSIKEGVEEGYHTVVYGVSSMLDRAEETLGKISIDWAQWRKFDRPDWRTEYAYTPSHLDPALYTHINYAFAKVERGTFAVVNMEPSDDELLRQLQVHRAAGIKVLISIGGWSFSRGEAVFVERTNFTLLLQELYTACQTACLLLTAATRSLIADQHYELGEIHKYLDFINLMTYDFNGGSFPGTQVANALAPVADCLSRWCGKPADIDTAVQQYLSAGVPASKLVLGLTTYACTFTLADPTGTLDPGIARTTGGPATAPTGGECTLTSATLSWYELKREMAAAGTMPVVHDASMSSYAVYGPNKQYWATFDSQETHRRKILGAFAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNVXXXXXXXXXATKHAMAGTATPREIRQSPQLSPKPQPPAPLGLLNKLSADFDKEKEENSKLKAALGNLSLARSPTIAKVMLPCVAAAEMHLNAEHLYAAVVEAQREWLDVMDEAKQSFYQFEVLVLKNVHVFMPGEAAAAAAKQP 3207
            MASWVVGIDTDLDTAINAISPATTQTELIAAMLQLMDALATPAGASRLSKLAAADDAEYLAIDQKASQMRQALFELDYRHYVLAPAKPVRRTEATRHARTRQRSLKASESCEATGILEGGDGSGITSLIQGVNGDRIKCLAKGDCEDAQQDREACAGSECCAPPIPEIPFLEVCLSGELCVPIPTINTVTGKRDLCGLSPSSLNTLALLNVAMSHDKCISDIQAVLADKGLHRALASGVTVKVAASMCLNVEEFVKSAPGLSEDSAEPITKALEYLNIDTCIISANVVYHPLTGFLTFELNINGGVIALYVGVETQMYDDLKDKWGLCEGLADADCGDAKGAECCQMCAGENRGLVSMAVGLLFVGDQLTTLETLKEDGLRRXXXXXXXXXXXSGGRAAAWTSHNYPHDTRRLSFWDDLVGVANTIKEEVIQPAADFVVDEEVSIKEGVEEGYHTVVYGVSSMLDRAEETLGKISIDWAQWRKFDRPDWRTEYAYTPSHLDPALYTHINYAFAKVERGTFAVVNMEPSDDELLRQLQVHRAAGIKVLISIGGWSFSRGEAVFVERTNFTLLLQELYTACQTACLLLTAATRSLIADQHYELGEIHKYLDFINLMTYDFNGGSFPGTQVANALAPVADCLSRWCGKPADIDTAVQQYLSAGVPASKLVLGLTTYACTFTLADPTGTLDPGIARTTGGPATAPTGGECTLTSATLSWYELKREMAAAGTMPVVHDASMSSYAVYGPNKQYWATFDSQETHRRKILGAFAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNVXXXXXXXXXATKHAMAGTATPREIRQSPQLSPKPQPPAPLGLLNKLSADFDKEKEENSKLKAALGNLSLARSPTIAKVMLPCVAAAEMHLNAEHLYAAVVEAQREWLDVMDEAKQSFYQFEVLVLKNVHVFMPGEAAAAAAKQP
Sbjct:    1 MASWVVGIDTDLDTAINAISPATTQTELIAAMLQLMDALATPAGASRLSKLAAADDAEYLAIDQKASQMRQALFELDYRHYVLAPAKPVRRTEATRHARTRQRSLKASESCEATGILEGGDGSGITSLIQGVNGDRIKCLAKGDCEDAQQDREACAGSECCAPPIPEIPFLEVCLSGELCVPIPTINTVTGKRDLCGLSPSSLNTLALLNVAMSHDKCISDIQAVLADKGLHRALASGVTVKVAASMCLNVEEFVKSAPGLSEDSAEPITKALEYLNIDTCIISANVVYHPLTGFLTFELNINGGVIALYVGVETQMYDDLKDKWGLCEGLADADCGDAKGAECCQMCAGENRGLVSMAVGLLFVGDQLTTLETLKEDGLRRXXXXXXXXXXXSGGRAAAWTSHNYPHDTRRLSFWDDLVGVANTIKEEVIQPAADFVVDEEVSIKEGVEEGYHTVVYGVSSMLDRAEETLGKISIDWAQWRKFDRPDWRTEYAYTPSHLDPALYTHINYAFAKVERGTFAVVNMEPSDDELLRQLQVHRAAGIKVLISIGGWSFSRGEAVFVERTNFTLLLQELYTACQTACLLLTAATRSLIADQHYELGEIHKYLDFINLMTYDFNGGSFPGTQVANALAPVADCLSRWCGKPADIDTAVQQYLSAGVPASKLVLGLTTYACTFTLADPTGTLDPGIARTTGGPATAPTGGECTLTSATLSWYELKREMAAAGTMPVVHDASMSSYAVYGPNKQYWATFDSQETHRRKILGAFAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNVXXXXXXXXXATKHAMAGTATPREIRQSPQLSPKPQPPAPLGLLNKLSADFDKEKEENSKLKAALGNLSLARSPTIAKVMLPCVAAAEMHLNAEHLYAAVVEAQREWLDVMDEAKQSFYQFEVLVLKNVHVFMPGEAAAAAAKQP 1069

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A836CK19_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK19_9STRA)

HSP 1 Score: 318 bits (815), Expect = 2.230e-96
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 1

Query: 2296 FAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV 2775
            FAA VSY DSRAPAANDFIGLNYY+HYYVSLWNI+TEPVLEAKL ALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYD+FEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV
Sbjct:  162 FAACVSYMDSRAPAANDFIGLNYYSHYYVSLWNIITEPVLEAKLMALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDNFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV 321

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A835YZP3_9STRA (Glycosyl hydrolases family 18-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP3_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.150e-86
Identity = 168/313 (53.67%), Postives = 201/313 (64.22%), Query Frame = 1

Query: 1540 KVERGTFAVVNMEPSDDELLRQLQVHRAAGIKVLISIGGWSFSRGEAVF------------------------------------------------------VERTNFTLLLQELYTACQTACLLLTAATRSLIADQHYELGEIHKYLDFINLMTYDFNGGSFPGTQVANALAPVADCLSRWCG--KPADIDTAVQQYLSAGVPASKLVLGLTTYACTFTLADPTGTLDPGIARTTGGPATAPTGGECTLTSATLSWYELKREMAAAGTMPVVHDASMSSYAVYGPNKQYWATFDSQETHRRKILGAFAASV 2310
            ++E  TF VVN+E +DD LL+QLQVHR+ G+KVL+SIGGWSFSR +  F                                                       ERTNFTLLLQE+Y AC+ A LLLTAAT +L AD HYEL +IHKYLDFINLMTYDFNGGSFPGT VANA AP+ DCLSRWC   K ADID+A+  Y++AGVPA+K+VLGL TY+ TFTLA P G+L PG+A   G         +CT++ A LSWYELKR+MA+AGT   V +ASMS+Y  YGP KQYWA+FD+QETHRRK   A +  V
Sbjct:    7 QIEPDTFKVVNVEWNDDALLQQLQVHRSRGVKVLVSIGGWSFSRADEAFKGTASDRIFPAMASTAANRAAFIQSAIAYATSAAHPLDGIDLDWEYPNYDGTAPAERTNFTLLLQEMYAACKRAGLLLTAATAALQADTHYELSQIHKYLDFINLMTYDFNGGSFPGTTVANANAPIVDCLSRWCANTKAADIDSALSSYINAGVPANKIVLGLATYSRTFTLAAPAGSLLPGVAAAAG---------DCTISDAVLSWYELKRQMASAGTTATVDNASMSAYTTYGPAKQYWASFDNQETHRRKACWAASKGV 310

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A2V0NMW4_9CHLO (Chitinase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NMW4_9CHLO)

HSP 1 Score: 253 bits (647), Expect = 2.010e-65
Identity = 148/352 (42.05%), Postives = 194/352 (55.11%), Query Frame = 1

Query: 1432 WAQWRKFD--RPDWRTEYAYTPSHLDPALYTHINYAFAKVERGTFAVVNMEPSDDELLRQLQVHRAAGIKVLISIGGWSFSRGEAVFV----------------------------------------------------ERTNFTLLLQELYTACQTACLLLTAATRSLIADQHYELGEIHKYLDFINLMTYDFNGGSFPGTQVANALAPVADCLSRWCGKPADIDTAVQQYLSAGVPASKLVLGLTTYACTFTLADPTGTLDPGIARTTGGPATAPTGGECTLT--SATLSWYELKREMAAAGTMPVVHDASMSSYAVYGPNKQYWATFDSQETHRRKILGAFAASVSYT 2319
            WAQWRK +  RP+W  +Y YTP HL+P LYTH+ YAF K+    F + N+E  DDEL+++++    +  K+L SIGGWSFSR + VF                                                     ER++FT LL+E+Y AC+   LLLTAATR++   QHYE+ EIH YLD+IN+M+YDF GG +  T   NA  P+ DC SRWC  P DIDT +++YL AGVP  KLVLGL TY  TFTLA P+    PG A  TG        GECT+   +  L+WYE+KR     G  P +    M++YA +G N QYW  FD++ET R K+  A +  +  T
Sbjct: 1306 WAQWRKSNNGRPEWCDKYGYTPGHLNPNLYTHVYYAFVKIAPD-FTITNVEERDDELMKEIRSENGSPKKML-SIGGWSFSRSDGVFAGTDASTMFPRMAASAQNRATFIASAIQYALDRGFDGLDLDWEHPNFDNNAVQERSDFTTLLREMYPACKQRGLLLTAATRAINTAQHYEVSEIHNYLDWINVMSYDFYGGGWSKTAKLNA--PIYDCQSRWCKTPFDIDTGLREYLDAGVPREKLVLGLGTYGRTFTLAQPSKDPPPGTAAATG----VAEAGECTMDPQAGILAWYEIKRR----GITPQIDPHGMAAYATWGSNNQYWVGFDTKETLRSKVCWAASLKLGGT 1645

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: D8LQW6_ECTSI (Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW6_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.690e-57
Identity = 110/208 (52.88%), Postives = 133/208 (63.94%), Query Frame = 1

Query: 2266 ETHRRKILGAFAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRY--------------------------------------LYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV 2775
            +T R +    F ASV +TD RAP ANDF+GLNYY+HYY SLWN++ EP +E KL+ALP E MTDMP C+YPEGLY ALK M+ +G PI VTENGIAD  D RR                                       LY++RYLYALSRAI+DG DV GY+YWSLYD+FEWCEGY  +FGLY V+FDTQ R+LR ++  +  V
Sbjct:  212 KTGRYRWWVPFCASVRFTDGRAPKANDFVGLNYYSHYYASLWNVIFEPDMEEKLRALPAETMTDMPHCIYPEGLYCALKAMSAIGHPIYVTENGIADADDTRRRWVLSNRHSENTVRPDQQVGSATENQANRGSRPKDQIRRLYLKRYLYALSRAIKDGCDVRGYFYWSLYDNFEWCEGYGPRFGLYEVDFDTQRRTLRDSSKYYVEV 419

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A7S4D568_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D568_HETAK)

HSP 1 Score: 185 bits (470), Expect = 1.270e-45
Identity = 92/161 (57.14%), Postives = 114/161 (70.81%), Query Frame = 1

Query: 2296 FAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVL-EAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV 2775
            F +++ Y D+ A + NDFIGLNYY+HY VS+W    + V  E KL A+P+EI TDMP  +YPEG Y AL+ + TL  PIIVTENGIADK D  R +YI RY+YA+S+AI +G DV GY+YWSL D+FEW  GY  KFGLY V+F TQER LR  A  F  +
Sbjct:  413 FFSNIHYHDANATSCNDFIGLNYYSHYCVSVWRTFFQGVPDEEKLAAMPREIYTDMPHVMYPEGFYRALRELQTLNLPIIVTENGIADKDDSCRQMYIARYMYAMSKAIHNGCDVRGYFYWSLLDNFEWSLGYGPKFGLYEVDFKTQERRLRDGAKIFRKI 573

[Close]

BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A383W8W2_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W8W2_TETOB)

HSP 1 Score: 181 bits (460), Expect = 9.310e-43
Identity = 133/369 (36.04%), Postives = 182/369 (49.32%), Query Frame = 1

Query: 1399 AEETLGKISI---DWAQWRKFD--RPDWRTEYAYTPSHLDPALYTHINYAFAKVERGTFAVVNMEPSDDELLRQLQVHRAAG--IKVLISIGGWSFSRGEAVF--------------------------VERTN--------------------------FTLLLQELYTACQTACLLLTAATRSLI-ADQHYELGEIHKYLDFINLMTYDFNG----GSFPGTQVANALAPVADCLSRWCGKPADIDTAVQQYLSAGVPASKLVLGLTTYACTFTLADPTGTLDPGIARTTGGPATAPTGGECTLTSATLSWYELKREMAAAGTMPVVHDASMSSYAVYGPNKQYWATFDSQETHRRKILGAFAASVS 2313
            A+  + K+ +   DWAQWR  +  RP W   YA+ P+ +DP+L THINYAFAK++  TF VVN+E ++DEL+  LQ  +A    +K LISIGGWSFSRG+ VF                          ++ TN                          FT L+ EL TA + A +LLT A R+     QH  +  +   +DFINLMTYD++G    GS  G +  N   PV  C++    K  DI  A+  Y   G P +KLV GL TY   F  A   G + PG+          P  GECT T  TL+WYE+K+ +A +    ++    M++Y V      +W  FD+ ETHR K+  A A  +S
Sbjct:  952 AKTKINKVVLYTTDWAQWRGSNNGRPGWCDAYAHRPADIDPSLATHINYAFAKIDSKTFEVVNVEANEDELIAGLQDLKAKNPALKTLISIGGWSFSRGDEVFKGSGSEKVFPEMAASAANRAAFIRSAIDYTNMRGFDGIDIDWEFPNFDGKAPQEVADFTSLMAELGTATKAAGMLLTTAMRATPDPQQHANVKAVAAAVDFINLMTYDYHGAFDFGS--GYRKVNTHTPVLSCVNP-LKKGWDIAGAIDAYEKQGAPLNKLVFGLGTYGRGFRFAG--GEMRPGLGSALNSDEGQPLQGECTQTKYTLAWYEIKKVVAKS----IIDPVQMAAYGV--TTSGHWVGFDTPETHRMKMCYARARGIS 1309

[Close]

BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A2E2V9F7_9BACT (Beta-glucosidase n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E2V9F7_9BACT)

HSP 1 Score: 172 bits (435), Expect = 2.520e-42
Identity = 85/165 (51.52%), Postives = 113/165 (68.48%), Query Frame = 1

Query: 2281 KILGAFAASVSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV 2775
            KI   F  ++ Y++  A    DF GLNYY+H ++       E  +    K    +IMTDMP  +YPEGLY A+  + ++GKPII+TENGIAD  DD+R L+I+RY+YA+++AIQ+GVDV GY+YWSL D+FEW EGY MKFGLY V+F TQER LR  +  F N+
Sbjct:  295 KINIPFFINLDYSNKDAIGKTDFFGLNYYSHVHLKFQFDKHEFFINTYPK---NDIMTDMPYTIYPEGLYRAIHRVKSIGKPIIITENGIADSKDDKRGLFIKRYIYAMNKAIQEGVDVRGYFYWSLMDNFEWAEGYDMKFGLYEVDFKTQERKLRQGSKEFINI 456

[Close]

BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A3A0DJS8_9BACT (Glycoside hydrolase family 1 protein n=2 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DJS8_9BACT)

HSP 1 Score: 172 bits (435), Expect = 2.910e-42
Identity = 90/156 (57.69%), Postives = 109/156 (69.87%), Query Frame = 1

Query: 2308 VSYTDSRAPAANDFIGLNYYNHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV 2775
            V + +S A  A DFIGLNYY+H++V L    T P   A     P +IMTDMP  VYPEG Y A+K ++ L  PI VTENGIAD  DDRR L+IRRYLYALS+A++ G DV GY+YWSL D+FEW EGY MKFGLY V+F TQ+R LR  A +F  +
Sbjct:  308 VEHHNSAAVRALDFIGLNYYSHFHVKLKWDRTTPFTFA---CPPNQIMTDMPFAVYPEGFYRAVKEISRLNAPIYVTENGIADAKDDRRELFIRRYLYALSQALKAGEDVRGYFYWSLLDNFEWAEGYDMKFGLYEVDFATQKRKLREGARSFVEI 460

[Close]

BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A7C2TT33_9BACT (Glycosyl hydrolase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2TT33_9BACT)

HSP 1 Score: 170 bits (430), Expect = 1.210e-41
Identity = 90/159 (56.60%), Postives = 108/159 (67.92%), Query Frame = 1

Query: 2302 ASVSYTDSRAPAANDFIGLNYYNHYYVSL-WNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRRYLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEGYHMKFGLYAVNFDTQERSLRPAAAAFTNV 2775
            A   + ++ A  A DFIGLNYY+H +V   WN    P     L   P EIMTDM   +Y EGLY A+KT+A+L  PI +TENGIAD  DDRR L+ RRYL+AL++AI+DG DV GY+YWSL D+FEW EGY MKFGLY +NF TQER LR  A  F  V
Sbjct:  305 AEARHFNAGAQRAMDFIGLNYYSHLHVKFRWN----PPQFFALTHRPDEIMTDMIYPIYAEGLYRAIKTVASLNVPIYITENGIADAKDDRRDLFFRRYLFALAQAIKDGCDVRGYFYWSLMDNFEWAEGYDMKFGLYKMNFQTQERKLRKGAEYFVEV 459

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353381 vs. uniprot
BLAST of jgi.p|Trimin1|353381 vs. uniprot

BLAST of jgi.p|Trimin1|353381 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZE40_9STRA	1.160e-294	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CNS3_9STRA	1.690e-29	90.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z3B9_9STRA	3.200e-21	53.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LDS6_ECTSI	1.010e-14	47.57	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5L120_9PHAE	2.040e-13	45.63	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
UPI001C5293DD	2.120e-9	38.89	E3 ubiquitin-protein ligase DA2-like n=1 Tax=Macad...	[more]
A0A0K9PEV9_ZOSMR	6.160e-9	39.60	RING-type domain-containing protein n=1 Tax=Zoster...	[more]
A0A4Y7JVI1_PAPSO	2.060e-8	40.74	Uncharacterized protein n=2 Tax=Papaver somniferum...	[more]
UPI001CC763B9	2.570e-8	39.60	E3 ubiquitin-protein ligase DA2L-like isoform X1 n...	[more]
A0A200PYW1_9MAGN	2.600e-8	38.89	Uncharacterized protein n=1 Tax=Macleaya cordata T...	[more]

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BLAST of jgi.p|Trimin1|353381 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CL70_9STRA	0.000e+0	100.00	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
A0A836CK19_9STRA	2.230e-96	96.25	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
A0A835YZP3_9STRA	2.150e-86	53.67	Glycosyl hydrolases family 18-domain-containing pr...	[more]
A0A2V0NMW4_9CHLO	2.010e-65	42.05	Chitinase n=1 Tax=Raphidocelis subcapitata TaxID=3...	[more]
D8LQW6_ECTSI	1.690e-57	52.88	Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus si...	[more]
A0A7S4D568_HETAK	1.270e-45	57.14	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A383W8W2_TETOB	9.310e-43	36.04	Uncharacterized protein n=1 Tax=Tetradesmus obliqu...	[more]
A0A2E2V9F7_9BACT	2.520e-42	51.52	Beta-glucosidase n=1 Tax=Candidatus Marinimicrobia...	[more]
A0A3A0DJS8_9BACT	2.910e-42	57.69	Glycoside hydrolase family 1 protein n=2 Tax=candi...	[more]
A0A7C2TT33_9BACT	1.210e-41	56.60	Glycosyl hydrolase family protein n=1 Tax=bacteriu...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_159	contig	Contig_159:342719..347474 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353381\|estExt_Genemark1.C_Ctg_1590051
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Description	cellular response to glucose starvation
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG2789@1\|root,KOG2789@2759\|Eukaryota
Evalue	1.66e-15
Seed ortholog	2880.D8LDS6
Hectar predicted targeting category	other localisation
TranscriptId	353703
Track	FilteredModels1
ProteinId	353381

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353381	gene_13895	Tribonema minus UTEX_B_3156	gene	Contig_159 342719..347474 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353381	Trimin1\|353381\|estExt_Genemark1.C_Ctg_1590051	Tribonema minus UTEX_B_3156	polypeptide	Contig_159 342719..347474 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13895_8	exon_13895_8	Tribonema minus UTEX_B_3156	exon	Contig_159 342719..343631 -
exon_13895_7	exon_13895_7	Tribonema minus UTEX_B_3156	exon	Contig_159 344013..344320 -
exon_13895_6	exon_13895_6	Tribonema minus UTEX_B_3156	exon	Contig_159 344866..345426 -
exon_13895_5	exon_13895_5	Tribonema minus UTEX_B_3156	exon	Contig_159 345889..345976 -
exon_13895_4	exon_13895_4	Tribonema minus UTEX_B_3156	exon	Contig_159 346181..346385 -
exon_13895_3	exon_13895_3	Tribonema minus UTEX_B_3156	exon	Contig_159 346498..346585 -
exon_13895_2	exon_13895_2	Tribonema minus UTEX_B_3156	exon	Contig_159 346765..346830 -
exon_13895_1	exon_13895_1	Tribonema minus UTEX_B_3156	exon	Contig_159 347466..347474 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13895	CDS_13895	Tribonema minus UTEX_B_3156	CDS	Contig_159 347466..347474 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_159:342719..347474-
coding sequence from alignment at Contig_159:342719..347474-

spliced messenger RNA

>mRNA_13895 ID=mRNA_13895|Name=jgi.p|Trimin1|353381|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2238bp|location=Sequence derived from alignment at Contig_159:342719..347474- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGCTGATCCGGATGAGAGCGCAGAGGAGTGCCCGATCTGCTTCAT
GAGCTACGCCGGCGTGAACACCACGGCCGCAGCGGCAGGCGCGATGCGCA
TTCCCCCGTGGCGCGACTGCCGTCTGGAGGGCGCCGCGCAGCGCGCCGGC
GATGACACGCCGCGCACCGAGTGCTGGCTGCAACTGAAGCCGCCGCGCGC
GAGCGTGGACTGCCCGTTCTGCAACTCGTCGCGCTTTGCGGTCGCGTACT
CGGGACCGCTGAGCGATGCCGAGAGGGAGCGTCGCCTGGTGGAGGAGCAG
TGCGTGATTGAGGCGCGCATACGGGCGGCGCGCGAGGCGGCGCAGGCAAG
TTCAACATTGGCGATTGCGGCTCGTGTGGAGGCGCTGACGGGAGTCGGAG
GCAGCGCGGCGCCCCAGCTGCGCTGCGCCCTCTCGCAGACATTCGGTCCG
GCAGTGGCTCAGGAAGAGGAGTACTGCAAACGCAAAGCCAGTGAGGAAGC
TGCCGCAGCAGCAGGTGCGTCCGCGCCCGATGCCGCAGGCGCCGCCGCCG
CTGCTGCCGGTACCGCCGCCGCCGCCGTGGCTGCTGCTCCTCCTGCGCTG
CAGCAGCAGCAGCCTCCACCTGGCGCGCAGCCTCTGTCAGCTGCGTCAAG
CACCGGTACCGCCGCCGCTTCCGCCGCGAACAGCAGCAGCAGGCCGCGCG
CTGACAGCGCCGCCAGCGGCAGCGCTGGCAGCAGCGGCGGCGGCGGGGCC
AGCAGCAGCGGCGGCGCCACTGCCGTTCCTGTGGCCTCCGTGGAGGCGCG
GCGCCAGCTGGAGATGGAGGTGCGGCTGCAGCACCTGCAGGCGTCCGACA
GGGCGCTGAGGGCGGGCAGCGGCGCGAGCAGCAGCGGCGGCGGCAGCGCT
ACGAGCGCGCGGCAGGGGAGCGGCGGCAGCAGCGGCGGCGGCGGCGGTGG
CGGCGGCGACGGCGAGCGGCAGCGCAGCCTGGAGGACCTTCTGCAGGCGT
TTGGGCCGCCCGATCTGCTCGCGCGCCTGTCGGACGGCTCCGACGCGCAG
CAGGTTGAGGACGCCATGCTGCTGGAGGCCATCAAGCGCAGCGTCGTGGA
CGAGCAGACGCGGCGCGCCAGAGAGGCAGAAGAGGCAGCGCTCCGCATTC
GCGACGCCGCCATTGGCTCTGCCGTGCGGCAGGCGCAGGAGGCGATGCGC
ACGGCGACAGCAGCGGCGGCGGCGGCGGCGGCGCCGCAGGCGGCGGCCGC
GGCGGCAGCGCCAGCGCCGGCCGCACCGGCGGCGCGGCGGGACGGCGGCA
GTGAATGGCAGCACAGCGTTGGACTGGGCAATGACATCCCGGAGACTGAG
ATAGAGCAGCTGATGTTGGCCATCCAGCTGAGTCTGCAGGACGCTCAGCA
GCAACCGCCGGCGGCTGCGCCGGCCGTGGCAGCGGCAGCCATGCCAGCGG
CGCCACCAGCAGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGGCGCCGCCT
TTGTCATCTGCGGCGGCATCACCAGTCTCCCGGCCAGCAGCGTCACTTGA
TGCGAAGCCCACAGCGATGGCAATTGTGCCCAGCTTCAGCAGCTCAGCAG
CAAGCGAGAATGCGGCGGACAGTAAGCCGCCAGCGACGGCGGCGGCGGCG
GCGATGGCCGATTGCAGCAGCGACGGCAGCACGAGCGGCATGCATGTGGG
TGATGTGGCAGGTGACGACGAGCGCAAACCGACGTCCGCTGAACTCCAGG
ACATGATGCGGCAGCAGCAGCAGCAGCAGCACCACCACCAGCAACAGCAG
CAGCAGCAGCAGAGGCAGCGCCAGCAGCACGTGCCGCCGCTGACCGCGGA
CCTGCCTGCCGCAGGGTTCCCCTCTTGCCTCGATTTCATCGGAGGCAGTG
GCAGCACGGGAAGCAGCGGCCGAGGTAGCAGCACTGGCGGCAGCGGCAGC
GGCAGCGCGCCTGGCACAATGCGGCAGGTCCCCATTAATCAGCCGTGGCC
AACTGCCGCCGCTGCTGCTGCCTCTCGGCCACCGGCAGGGCACACTCCCT
CTGCCCCTCAGACAATGCTGCCGGCTGGAGCCGCCGCGCCGCTGTCGCCG
CCGCGCCCAATGTCCGCCGCGCCGGCCGCTGAGCCGCAGCAGCAGCAGCA
GCGCAAGCCACGCGCCGTGGCAGCGGCGGCGCCGGCAGATGAGGCGGCGG
GCGGCGGCGCTGATGCGGCGGCAGGCGGCGGCGCGTGA

protein sequence of jgi.p|Trimin1|353381

>Trimin1|353381|estExt_Genemark1.C_Ctg_1590051 ID=Trimin1|353381|estExt_Genemark1.C_Ctg_1590051|Name=jgi.p|Trimin1|353381|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=746bp
MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAG
DDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQ
CVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGP
AVAQEEEYCKRKASEEAAAAAGASAPDAAGAAAAAAGTAAAAVAAAPPAL
QQQQPPPGAQPLSAASSTGTAAASAANSSSRPRADSAASGSAGSSGGGGA
SSSGGATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASSSGGGSA
TSARQGSGGSSGGGGGGGGDGERQRSLEDLLQAFGPPDLLARLSDGSDAQ
QVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMR
TATAAAAAAAAPQAAAAAAAPAPAAPAARRDGGSEWQHSVGLGNDIPETE
IEQLMLAIQLSLQDAQQQPPAAAPAVAAAAMPAAPPAAAAAAAAAAAAPP
LSSAAASPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPPATAAAA
AMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMRQQQQQQHHHQQQQ
QQQQRQRQQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSSTGGSGS
GSAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSP
PRPMSAAPAAEPQQQQQRKPRAVAAAAPADEAAGGGADAAAGGGA*

mRNA from alignment at Contig_159:342719..347474-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13895 ID=mRNA_13895|Name=jgi.p|Trimin1|353381|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4756bp|location=Sequence derived from alignment at Contig_159:342719..347474- (Tribonema minus UTEX_B_3156 )
ATGGCGGCTGTGAGAAGGTCAATGTGCAATGAGCTCACAAAACCTGCGAT
TACACAAACGTCCCTTCAAGTTCAACTTGAGCTTCGTCTCCGGTTCCAGT
TGTGTCAAGCGGGTGTAAGGGGGCGGTGTGGCAGCAACGCTGGTTGGTGA
CGTATAGTAGGTCGGCAGCAGCCGCCATCACCACTGTCTCTCCAGGGGAC
GCACCTGCAGAGCTGTTCTGCTGTTGTGCTGGTAGATGGGCAACTTCAGC
TCTACACACACTGTGAGGAAGAAAGCAGTCAGCAGAGACGCTGAACGGTA
TTGTCACAACAATGGCCTCTACTCCAGCTGTGCCCATGAAGAGCGAGTCG
TGCGCAGGTGAGAGGAGACATCGACCAATCGGCACATCTGCCACGTTCCA
TCTCCCTCACCTGATCAACTATGTGTGCTCTGCCTTCTGCGATCGCAGAT
GGATACTACACGGGGAACTAGCTCCTCGCTATCCGCCATTGGAGGTGAGC
GTTTCATGTGAAGAGATCTGAGTTTGGGCCCATAAAGCAGCCGACACTTC
GCGGTGTGCTGGTCTGTTCCGTCATCGATCGCTCGCGGTGCTGGCTGACC
AGAGGTTGACGCACAAAGCCTCTGTCTGCCGCTTCGTGTCACAGGATCCG
GATGAGAGCGCAGAGGAGTGCCCGATCTGCTTCATGAGCTACGCCGGCGT
GAACACCACGGTCTGCTGCGGGAAGCCACTATGTAAGGGTTGGGGAGGCA
GCATCGCTCTGAGCTCTCACAGAACCCCTGTGCAGCTGTTGTGCGTGGCC
ACTTCCTGTACACAGATCGCTTGGCACTCTGCTCAGAACAGTCAGCAATG
TGTCCACTGACGCGCCTTGCAGCGCCTGGCCCACGAGAGGCCGCAGCGGC
AGGCGCGATGCGCATTCCCCCGTGGCGCGACTGCCGTCTGGAGGGCGCCG
CGCAGCGCGCCGGCGATGACACGCCGCGTGAACCGCAATTACGCCCCCTT
GCTGTTGCGCTGCGAATCCCCTCTGCGCTCATGCTCATCATCGCGCTCCC
CTGCGCGCCCCTCCCCCCCCCCCCGGCTGCTCGCGCCAGGCACCGAGTGC
TGGCTGCAACTGAAGCCGCCGCGCGCGAGCGTGGACTGCCCGTTCTGCAA
CTCGTCGCGCTTTGCGGTCGCGTACTCGGGACCGCTGAGCGATGCCGAGA
GGGAGCGTCGCCTGGTGGAGGAGCAGTGCGTGATTGAGGCGCGCATACGG
GCGGCGCGCGAGGCGGCGCAGGCAAGTTCAACATTGGCGATTGCGTGTGT
CGTTGGGGGGGCGGGGGCAAGGTTAACATCGGCGATTACGTGCGTTGGGG
CCTGGGGGCGGGGGGGGGGGGGGGGGGGGTGCTCACGCAGCGCGGCCGAT
CGGGAAGGGAGCAGCGCCGCGCCATTGCTGCGGCAGCAGGCAGGCAGAGC
TGGTGTGTATGAGTAAACTCGCTCCTCGGTTGCTGGGCCTGACGAGAGGG
CTCGTGTGGAGGCGCTGACGGGAGTCGGAGGCAGCGCGGCGCCCCAGCTG
CGCTGCGCCCTCTCGCAGACATTCGGTCCGGCAGTGGTGCGCGCACGATG
TGTGCCAGGCAGGGGCAGCGGCCTGTCCTGGAAGTTGAGTGCTGCAACAT
TGGCTGAACGCGATGAGCGCACCACATTCAAAACAACATGCGTGCATGGC
GGCGATGTGAATGCGTGTCTGACAGAGTGCCGCTGCGCATGGCATTCTGA
ATACTGATCTGTGTGCATGTGCGGCTTTCTGCTGTCACTGCGCGCGCGCA
GGATTGCCTGCGCCTCTCAGGCTGAGCGCAGCTTCGCTGCCCATGCGCAG
CTTGCGCAGAGCGCAGGCAAGCTTTGTGCTGCACGCACTCACAGCATCGT
ACATGCCGCCAGGCTGTAGTTGTAAGCACATGCAGTCACCTGCTGTTCAA
CGAGCAATGGCGCGGCGCAGGTCGGCCCGGTATGGCTGTCAGCGGAGCAC
AATGTTTACATGCTGCTGACTGCGATGCACCCTTGCGACCTTCTGCAGGC
TCAGGAAGAGGAGTACTGCAAACGCAAAGCCAGTGAGGAAGCTGCCGCAG
CAGCAGGTGCGTCCGCGCCCGATGCCGCAGGCGCCGCCGCCGCTGCTGCC
GGTACCGCCGCCGCCGCCGTGGCTGCTGCTCCTCCTGCGCTGCAGCAGCA
GCAGCCTCCACCTGGCGCGCAGCCTCTGTCAGCTGCGTCAAGCACCGGTA
CCGCCGCCGCTTCCGCCGCGAACAGCAGCAGCAGGCCGCGCGCTGACAGC
GCCGCCAGCGGCAGCGCTGGCAGCAGCGGCGGCGGCGGGGCCAGCAGCAG
CGGCGGCGCCACTGCCGTTCCTGTGGCCTCCGTGGAGGCGCGGCGCCAGC
TGGAGATGGAGGTGCGGCTGCAGCACCTGCAGGCGTCCGACAGGGCGCTG
AGGGCGGGCAGCGGCGCGAGCAGCAGCGGCGGCGGCAGCGCTACGAGCGC
GCGGCAGGGGAGCGGCGGCAGCAGCGGCGGCGGCGGCGGTGGCGGCGGCG
ACGGCGAGCGGCAGCGCAGCCTGGAGGACCTTCTGCAGGCGTTTGGGCCG
CCCGATCTGGTGAGGATCACAGAGGCGTGATGCTGCCTGATGAGCAGTGC
TCAGCATAAATGGTAATGATGATGCGTCTCATGTGGCACAGCCGGCACGT
ATGATGGCATTGGATCACGGTGGCGGCCGACGGTGAACCTTGGTGCGGCG
ATCCCCGTTGGTGATCGGCAGCAGAGCCATCCGGAAGTGTTCCGCTTGCA
TGCATTGCTGAGACGGGATGCTCACAGCGCTGGTAGACCCCCCTCGGGCG
CCTGCGTAGCATATGCATTCAGGCGCTGATTGTCAATCCCGAGTCGCTCG
ACGCTGTGCACCACATTCACGCACTGCGGGCTTATGGTGCGCTGGTGCGC
GCTGCGCGCCTCCGGCATGCGCAACGCCGCGTCGCCGCTGCGACGGCCCG
GCTGCGCAGTGCTTGCTGCCTTCGCCTAGCGCGCTCGCGCTTATCAGAGA
CGCCTTCGCCGCGCTGCACGCCCGCCCACACGCGCGCACCGCCTCTGATG
CCCGTCCGCGCGCATCGAGCCGCCCGCCCCCGCCCCCCCACGCCCACGGC
GCAGCTCGCGCGCCTGTCGGACGGCTCCGACGCGCAGCAGGTTGAGGACG
CCATGCTGCTGGAGGCCATCAAGCGCAGCGTCGTGGACGAGCAGACGCGG
CGCGCCAGAGAGGCAGAAGAGGCAGCGCTCCGCATTCGCGACGCCGCCAT
TGGCTCTGCCGTGCGGCAGGCGCAGGAGGCGATGCGCACGGCGACAGCAG
CGGCGGCGGCGGCGGCGGCGCCGCAGGCGGCGGCCGCGGCGGCAGCGCCA
GCGCCGGCCGCACCGGCGGCGCGGCGGGACGGCGGCAGTGAATGGCAGCA
CAGCGTTGGACTGTAAGTGTTTTGGGGGCACATTGTGAACATGGACAGGT
TCAGGATTCTTTGAAATGATTTGCCTACACCATGTTGAGCTCAGGCATTA
AATGCGGGTACACTTGAACGATTGCTCGCCATCTGAGGCCAGCCTCTCTA
GCATGTATGACAGCAAGCGCTGATTGCAGTTGCATCCCAGCGCAGAGGGA
CGTTGTGCACCACCAACAATCATGCACGCCACGCTGCGCACGCGACGGCG
CGGCCAACACAGCTTTACTGCCATTATGTGCTTGCATGCGGCACGTTGCA
GATGCTGCCATCATCCTGCGCAGGCGGCAAAACCATGAGAGATCACGCCT
TATTTGCTTGGGCTCGTCCCCCCCCCCCCCCTCCCTCTTGCAGGGGCAAT
GACATCCCGGAGACTGAGATAGAGCAGCTGATGTTGGCCATCCAGCTGAG
TCTGCAGGACGCTCAGCAGCAACCGCCGGCGGCTGCGCCGGCCGTGGCAG
CGGCAGCCATGCCAGCGGCGCCACCAGCAGCGGCGGCAGCAGCAGCAGCA
GCAGCAGCGGCGCCGCCTTTGTCATCTGCGGCGGCATCACCAGTCTCCCG
GCCAGCAGCGTCACTTGATGCGAAGCCCACAGCGATGGCAATTGTGCCCA
GCTTCAGCAGCTCAGCAGCAAGCGAGAATGCGGCGGACAGTAAGCCGCCA
GCGACGGCGGCGGCGGCGGCGATGGCCGATTGCAGCAGCGACGGCAGCAC
GAGCGGCATGCATGTGGGTGATGTGGCAGGTGACGACGAGCGCAAACCGA
CGTCCGCTGAACTCCAGGACATGATGCGGCAGCAGCAGCAGCAGCAGCAC
CACCACCAGCAACAGCAGCAGCAGCAGCAGAGGCAGCGCCAGCAGCACGT
GCCGCCGCTGACCGCGGACCTGCCTGCCGCAGGGTTCCCCTCTTGCCTCG
ATTTCATCGGAGGCAGTGGCAGCACGGGAAGCAGCGGCCGAGGTAGCAGC
ACTGGCGGCAGCGGCAGCGGCAGCGCGCCTGGCACAATGCGGCAGGTCCC
CATTAATCAGCCGTGGCCAACTGCCGCCGCTGCTGCTGCCTCTCGGCCAC
CGGCAGGGCACACTCCCTCTGCCCCTCAGACAATGCTGCCGGCTGGAGCC
GCCGCGCCGCTGTCGCCGCCGCGCCCAATGTCCGCCGCGCCGGCCGCTGA
GCCGCAGCAGCAGCAGCAGCGCAAGCCACGCGCCGTGGCAGCGGCGGCGC
CGGCAGATGAGGCGGCGGGCGGCGGCGCTGATGCGGCGGCAGGCGGCGGC
GCGTGA

Coding sequence (CDS) from alignment at Contig_159:342719..347474-

>mRNA_13895 ID=mRNA_13895|Name=jgi.p|Trimin1|353381|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2238bp|location=Sequence derived from alignment at Contig_159:342719..347474- (Tribonema minus UTEX_B_3156 )
ATGGCGGCTGATCCGGATGAGAGCGCAGAGGAGTGCCCGATCTGCTTCAT
GAGCTACGCCGGCGTGAACACCACGGCCGCAGCGGCAGGCGCGATGCGCA
TTCCCCCGTGGCGCGACTGCCGTCTGGAGGGCGCCGCGCAGCGCGCCGGC
GATGACACGCCGCGCACCGAGTGCTGGCTGCAACTGAAGCCGCCGCGCGC
GAGCGTGGACTGCCCGTTCTGCAACTCGTCGCGCTTTGCGGTCGCGTACT
CGGGACCGCTGAGCGATGCCGAGAGGGAGCGTCGCCTGGTGGAGGAGCAG
TGCGTGATTGAGGCGCGCATACGGGCGGCGCGCGAGGCGGCGCAGGCAAG
TTCAACATTGGCGATTGCGGCTCGTGTGGAGGCGCTGACGGGAGTCGGAG
GCAGCGCGGCGCCCCAGCTGCGCTGCGCCCTCTCGCAGACATTCGGTCCG
GCAGTGGCTCAGGAAGAGGAGTACTGCAAACGCAAAGCCAGTGAGGAAGC
TGCCGCAGCAGCAGGTGCGTCCGCGCCCGATGCCGCAGGCGCCGCCGCCG
CTGCTGCCGGTACCGCCGCCGCCGCCGTGGCTGCTGCTCCTCCTGCGCTG
CAGCAGCAGCAGCCTCCACCTGGCGCGCAGCCTCTGTCAGCTGCGTCAAG
CACCGGTACCGCCGCCGCTTCCGCCGCGAACAGCAGCAGCAGGCCGCGCG
CTGACAGCGCCGCCAGCGGCAGCGCTGGCAGCAGCGGCGGCGGCGGGGCC
AGCAGCAGCGGCGGCGCCACTGCCGTTCCTGTGGCCTCCGTGGAGGCGCG
GCGCCAGCTGGAGATGGAGGTGCGGCTGCAGCACCTGCAGGCGTCCGACA
GGGCGCTGAGGGCGGGCAGCGGCGCGAGCAGCAGCGGCGGCGGCAGCGCT
ACGAGCGCGCGGCAGGGGAGCGGCGGCAGCAGCGGCGGCGGCGGCGGTGG
CGGCGGCGACGGCGAGCGGCAGCGCAGCCTGGAGGACCTTCTGCAGGCGT
TTGGGCCGCCCGATCTGCTCGCGCGCCTGTCGGACGGCTCCGACGCGCAG
CAGGTTGAGGACGCCATGCTGCTGGAGGCCATCAAGCGCAGCGTCGTGGA
CGAGCAGACGCGGCGCGCCAGAGAGGCAGAAGAGGCAGCGCTCCGCATTC
GCGACGCCGCCATTGGCTCTGCCGTGCGGCAGGCGCAGGAGGCGATGCGC
ACGGCGACAGCAGCGGCGGCGGCGGCGGCGGCGCCGCAGGCGGCGGCCGC
GGCGGCAGCGCCAGCGCCGGCCGCACCGGCGGCGCGGCGGGACGGCGGCA
GTGAATGGCAGCACAGCGTTGGACTGGGCAATGACATCCCGGAGACTGAG
ATAGAGCAGCTGATGTTGGCCATCCAGCTGAGTCTGCAGGACGCTCAGCA
GCAACCGCCGGCGGCTGCGCCGGCCGTGGCAGCGGCAGCCATGCCAGCGG
CGCCACCAGCAGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGGCGCCGCCT
TTGTCATCTGCGGCGGCATCACCAGTCTCCCGGCCAGCAGCGTCACTTGA
TGCGAAGCCCACAGCGATGGCAATTGTGCCCAGCTTCAGCAGCTCAGCAG
CAAGCGAGAATGCGGCGGACAGTAAGCCGCCAGCGACGGCGGCGGCGGCG
GCGATGGCCGATTGCAGCAGCGACGGCAGCACGAGCGGCATGCATGTGGG
TGATGTGGCAGGTGACGACGAGCGCAAACCGACGTCCGCTGAACTCCAGG
ACATGATGCGGCAGCAGCAGCAGCAGCAGCACCACCACCAGCAACAGCAG
CAGCAGCAGCAGAGGCAGCGCCAGCAGCACGTGCCGCCGCTGACCGCGGA
CCTGCCTGCCGCAGGGTTCCCCTCTTGCCTCGATTTCATCGGAGGCAGTG
GCAGCACGGGAAGCAGCGGCCGAGGTAGCAGCACTGGCGGCAGCGGCAGC
GGCAGCGCGCCTGGCACAATGCGGCAGGTCCCCATTAATCAGCCGTGGCC
AACTGCCGCCGCTGCTGCTGCCTCTCGGCCACCGGCAGGGCACACTCCCT
CTGCCCCTCAGACAATGCTGCCGGCTGGAGCCGCCGCGCCGCTGTCGCCG
CCGCGCCCAATGTCCGCCGCGCCGGCCGCTGAGCCGCAGCAGCAGCAGCA
GCGCAAGCCACGCGCCGTGGCAGCGGCGGCGCCGGCAGATGAGGCGGCGG
GCGGCGGCGCTGATGCGGCGGCAGGCGGCGGCGCGTGA