Trimin1|353381|estExt_Genemark1.C_Ctg_1590051 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353381
Unique NameTrimin1|353381|estExt_Genemark1.C_Ctg_1590051
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length746
Homology
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A835ZE40_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE40_9STRA)

HSP 1 Score: 834 bits (2154), Expect = 1.160e-294
Identity = 706/706 (100.00%), Postives = 706/706 (100.00%), Query Frame = 0
Query:    1 MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGPAVAQEEEYCKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASXXXXXXXXXXXXXXXXXXXXXXXXXXDGERQRSLEDLLQAFGPPDLLARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGLGNDIPETEIEQLMLAIQLSLQDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSSXXXSPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPXXXXXXXAMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMXXXXXXXXXXXXXXXXXXXXXXQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSXXXXXXXXXAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSPPRPMSA 706
            MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGPAVAQEEEYCKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASXXXXXXXXXXXXXXXXXXXXXXXXXXDGERQRSLEDLLQAFGPPDLLARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGLGNDIPETEIEQLMLAIQLSLQDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSSXXXSPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPXXXXXXXAMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMXXXXXXXXXXXXXXXXXXXXXXQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSXXXXXXXXXAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSPPRPMSA
Sbjct:    1 MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGPAVAQEEEYCKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASXXXXXXXXXXXXXXXXXXXXXXXXXXDGERQRSLEDLLQAFGPPDLLARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGLGNDIPETEIEQLMLAIQLSLQDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSSXXXSPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPXXXXXXXAMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMXXXXXXXXXXXXXXXXXXXXXXQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSXXXXXXXXXAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSPPRPMSA 706          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A836CNS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.690e-29
Identity = 93/103 (90.29%), Postives = 96/103 (93.20%), Query Frame = 0
Query:  340 LARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMRTATXXXXXXXXXXXXXXXXXXXXXAPAARRDGGSEWQHSVGL 442
            LARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIR+AA+GSAVRQAQEAMRTAT XXXXXXXXXXXXXXXXX    PAARRDGGS+WQ  VGL
Sbjct:   26 LARLSDGSDAQQVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRNAAVGSAVRQAQEAMRTATAXXXXXXXXXXXXXXXXX----PAARRDGGSKWQRRVGL 124          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A835Z3B9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.200e-21
Identity = 60/113 (53.10%), Postives = 69/113 (61.06%), Query Frame = 0
Query:    4 DPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQA 116
            +PD+ AEECPICFM     NTT      +       C               TEC+LQL+PPR  VDCPFCNS  FAV+YSGPLS  E+ RRL EEQ VIEA+IRAARE A+A
Sbjct:   56 NPDDGAEECPICFMFCHATNTTVCCGKPL-------C---------------TECYLQLRPPRVCVDCPFCNSGSFAVSYSGPLSADEKHRRLQEEQRVIEAKIRAAREEAEA 146          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: D8LDS6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.010e-14
Identity = 49/103 (47.57%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   10 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAARE 112
            EECPICFM Y GVN T   A  +       C               TEC+LQ++PPR+SV CPFCN ++F+V Y GP S+ +RE+R+ EEQ  IEARI A +E
Sbjct:  133 EECPICFMHYHGVNRTTCCAKPL-------C---------------TECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSEEDREKRMAEEQRTIEARIHAEQE 213          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A6H5L120_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L120_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.040e-13
Identity = 47/103 (45.63%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   10 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAARE 112
            EECPICFM Y GVN T   A  +       C               TEC+LQ++PPR+SV CPFCN ++F+V Y GP S  + ++R+ EEQ  IEARI A +E
Sbjct:  130 EECPICFMHYHGVNRTTCCAKPL-------C---------------TECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSKEDHDKRMAEEQRTIEARIHAEQE 210          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: UPI001C5293DD (E3 ubiquitin-protein ligase DA2-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C5293DD)

HSP 1 Score: 68.9 bits (167), Expect = 2.120e-9
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 0
Query:   10 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQ 115
            EECPICF+ Y  +N +              C ++G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR  R+  Q
Sbjct:   57 EECPICFLYYPSLNRSR-------------CCMKGIC---------TECFLQMKPPHSTRPTQCPFCKTSSYAVEYRGMRSKEEKGMEQVEEQRVIEAKIRKRRQELQ 142          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A0K9PEV9_ZOSMR (RING-type domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PEV9_ZOSMR)

HSP 1 Score: 70.1 bits (170), Expect = 6.160e-9
Identity = 40/101 (39.60%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   10 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIR 108
            EECPICF+ Y  +N +              C ++G           TEC+LQ++PP +S    CPFC +S +AV Y G  S  ER +  +EEQ VIEA+IR
Sbjct:   59 EECPICFLHYPSLNRST-------------CCMKGIC---------TECFLQMQPPHSSRPTQCPFCKTSNYAVEYKGMKSKEERGKEQLEEQRVIEAKIR 137          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A4Y7JVI1_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JVI1_PAPSO)

HSP 1 Score: 68.6 bits (166), Expect = 2.060e-8
Identity = 44/108 (40.74%), Postives = 56/108 (51.85%), Query Frame = 0
Query:    6 DESA---EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIR 108
            DESA   EECPICF+ Y  +N +              C  +G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR
Sbjct:   50 DESAFDLEECPICFLYYPSLNRSR-------------CCTKGIC---------TECFLQMKPPHSTRPTQCPFCKTSNYAVEYRGMRSKEEKGMEQVEEQRVIEAKIR 135          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: UPI001CC763B9 (E3 ubiquitin-protein ligase DA2L-like isoform X1 n=4 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC763B9)

HSP 1 Score: 68.2 bits (165), Expect = 2.570e-8
Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 0
Query:   10 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIR 108
            EECPICF+ Y  +N +              C ++G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR
Sbjct:   57 EECPICFLYYPSLNRSR-------------CCMKGIC---------TECFLQMKPPHSTRPTQCPFCKTSNYAVEYRGMRSKEEKGMEQVEEQRVIEAKIR 135          
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Match: A0A200PYW1_9MAGN (Uncharacterized protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PYW1_9MAGN)

HSP 1 Score: 68.2 bits (165), Expect = 2.600e-8
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 0
Query:   10 EECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAGDDTPRTECWLQLKPPRAS--VDCPFCNSSRFAVAYSGPLSDAERERRLVEEQCVIEARIRAAREAAQ 115
            EECPICF+ Y  +N +              C  +G           TEC+LQ+KPP ++    CPFC +S +AV Y G  S  E+    VEEQ VIEA+IR  R+  Q
Sbjct:   57 EECPICFLYYPSLNRSR-------------CCTKGIC---------TECFLQMKPPHSTRPTQCPFCKTSNYAVEYRGMRSKEEKGMEQVEEQRVIEAKIRMQRQELQ 142          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353381 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZE40_9STRA1.160e-294100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNS3_9STRA1.690e-2990.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3B9_9STRA3.200e-2153.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LDS6_ECTSI1.010e-1447.57RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L120_9PHAE2.040e-1345.63RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001C5293DD2.120e-938.89E3 ubiquitin-protein ligase DA2-like n=1 Tax=Macad... [more]
A0A0K9PEV9_ZOSMR6.160e-939.60RING-type domain-containing protein n=1 Tax=Zoster... [more]
A0A4Y7JVI1_PAPSO2.060e-840.74Uncharacterized protein n=2 Tax=Papaver somniferum... [more]
UPI001CC763B92.570e-839.60E3 ubiquitin-protein ligase DA2L-like isoform X1 n... [more]
A0A200PYW1_9MAGN2.600e-838.89Uncharacterized protein n=1 Tax=Macleaya cordata T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 366..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 559..745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..663
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..611
NoneNo IPR availablePANTHERPTHR31315:SF1PROTEIN SIP5coord: 56..379
IPR039301Protein Sip5/DA2PANTHERPTHR31315PROTEIN SIP5coord: 56..379
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 449..468
score: 8.686265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_159contigContig_159:342719..347474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353381mRNA_13895Tribonema minus UTEX_B_3156 mRNAContig_159 342719..347474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353381|estExt_Genemark1.C_Ctg_1590051 ID=Trimin1|353381|estExt_Genemark1.C_Ctg_1590051|Name=jgi.p|Trimin1|353381|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=746bp
MAADPDESAEECPICFMSYAGVNTTAAAAGAMRIPPWRDCRLEGAAQRAG
DDTPRTECWLQLKPPRASVDCPFCNSSRFAVAYSGPLSDAERERRLVEEQ
CVIEARIRAAREAAQASSTLAIAARVEALTGVGGSAAPQLRCALSQTFGP
AVAQEEEYCKRKASEEAAAAAGASAPDAAGAAAAAAGTAAAAVAAAPPAL
QQQQPPPGAQPLSAASSTGTAAASAANSSSRPRADSAASGSAGSSGGGGA
SSSGGATAVPVASVEARRQLEMEVRLQHLQASDRALRAGSGASSSGGGSA
TSARQGSGGSSGGGGGGGGDGERQRSLEDLLQAFGPPDLLARLSDGSDAQ
QVEDAMLLEAIKRSVVDEQTRRAREAEEAALRIRDAAIGSAVRQAQEAMR
TATAAAAAAAAPQAAAAAAAPAPAAPAARRDGGSEWQHSVGLGNDIPETE
IEQLMLAIQLSLQDAQQQPPAAAPAVAAAAMPAAPPAAAAAAAAAAAAPP
LSSAAASPVSRPAASLDAKPTAMAIVPSFSSSAASENAADSKPPATAAAA
AMADCSSDGSTSGMHVGDVAGDDERKPTSAELQDMMRQQQQQQHHHQQQQ
QQQQRQRQQHVPPLTADLPAAGFPSCLDFIGGSGSTGSSGRGSSTGGSGS
GSAPGTMRQVPINQPWPTAAAAAASRPPAGHTPSAPQTMLPAGAAAPLSP
PRPMSAAPAAEPQQQQQRKPRAVAAAAPADEAAGGGADAAAGGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039301Sip5/DA2
IPR003903UIM_dom