Trimin1|353234|estExt_Genemark1.C_Ctg_1510029 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353234
Unique Name	Trimin1\|353234\|estExt_Genemark1.C_Ctg_1510029
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	359

Homology

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BLAST of jgi.p|Trimin1|353234 vs. uniprot
Match: A0A836CLL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL4_9STRA)

HSP 1 Score: 595 bits (1534), Expect = 5.060e-211
Identity = 333/376 (88.56%), Postives = 338/376 (89.89%), Query Frame = 0

Query:    1 MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALEDKIGAMAGSMQDVVAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPITLPIKLTGGQRVSKLHDVLARTAVYVDQKVANMLWDVSNLQPMAFFI----PRSGHS--------------QRQGDCELTRLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFGGGGRPVGSXXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVLCNVVPGPCKYRHFDT 358
            MSGESGESAEQATENPVDISDRLERF+NSVEQRLGALEDKIGAMAGSMQDVVAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGV  TLPIKLTGGQRVSKLHDVLARTAVYVDQKVANMLWDVSNLQP+AF       RSG +               R    EL  LGLTELPQGSRTF+SEM VCEVMLAKFEMLVVHQEGVTISDADLAAIQGAI SDLDEWTSNLDA+STSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAF GGGRPVGS XXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNP  CNVVPGPCKYRH DT
Sbjct:    1 MSGESGESAEQATENPVDISDRLERFINSVEQRLGALEDKIGAMAGSMQDVVAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVLTTLPIKLTGGQRVSKLHDVLARTAVYVDQKVANMLWDVSNLQPIAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFVSEMAVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIQSDLDEWTSNLDAMSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPAPCNVVPGPCKYRHSDT 376

[Close]

BLAST of jgi.p|Trimin1|353234 vs. uniprot
Match: A0A835YJA4_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA4_9STRA)

HSP 1 Score: 565 bits (1457), Expect = 4.140e-201
Identity = 323/376 (85.90%), Postives = 327/376 (86.97%), Query Frame = 0

Query:    1 MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALEDKIGAMAGSMQDVVAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPITLPIKLTGGQRVSKLHDVLARTAVYVDQKVANMLWDVSNLQPMAFFI----PRSGHS--------------QRQGDCELTRLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFGGGGRPVGSXXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVLCNVVPGPCKYRHFDT 358
            MSGESGESAEQATENPVDISDRLERFMNSVEQRLGAL+DKIGAMAGSMQDV+AQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVP TLPIKLTGGQR SKLHDVLARTAVYVDQK            P AF       RSG +               R    EL  LGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHH+LAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAF GGGRPVGS XXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPV  NVVPGPCKYRH DT
Sbjct:    1 MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALQDKIGAMAGSMQDVMAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPTTLPIKLTGGQRASKLHDVLARTAVYVDQK------------PNAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVPGNVVPGPCKYRHSDT 364

[Close]

BLAST of jgi.p|Trimin1|353234 vs. uniprot
Match: A0A836CHX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX2_9STRA)

HSP 1 Score: 355 bits (911), Expect = 2.140e-119
Identity = 196/205 (95.61%), Postives = 196/205 (95.61%), Query Frame = 0

Query:  156 ELTRLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFGGGGRPVGSXXXXXXXXXXXXXXXXXXGTRSQPRGAPANCP--YGVCWVWWRHVKEQNPVLCNVVPGPCKYRHFDT 358
            EL  LGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAF GGGRPVGS XXXXXXXXXXXXXXXXXGTRSQPRGAPANCP  YG CWVWWRHVKEQNPV CNVVPGPCKYRH DT
Sbjct:   76 ELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPKAYGGCWVWWRHVKEQNPVPCNVVPGPCKYRHSDT 280

[Close]

BLAST of jgi.p|Trimin1|353234 vs. uniprot
Match: A0A836CCV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV7_9STRA)

HSP 1 Score: 277 bits (708), Expect = 3.510e-80
Identity = 161/211 (76.30%), Postives = 166/211 (78.67%), Query Frame = 0

Query:   44 MAGSMQDVVAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPITLPIKLTGGQRVSKLHDVLARTAV-YVDQKVANMLWDVSNLQPMAFFIPRSGHSQRQGDCELTRLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIPTVA 253
            MAGS+QDVVAQEVQLQVEESSRSTSSEDTRERK LMENEAYR HLLLRCGVP TLPIKLTGGQRVSKLHDVLARTAV     +    L+    L                   EL  LGLTELPQGSRTFMS+MEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDL    +  DALST LLQHHRL PPFGSGEALDVPDIPTVA
Sbjct:    1 MAGSLQDVVAQEVQLQVEESSRSTSSEDTRERKLLMENEAYRCHLLLRCGVPTTLPIKLTGGQRVSKLHDVLARTAVGKATARSYQALYKGVKLMR----------------AELIGLGLTELPQGSRTFMSKMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLTSGPAT-DALSTILLQHHRLPPPFGSGEALDVPDIPTVA 194

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353234 vs. uniprot

BLAST of jgi.p|Trimin1|353234 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A836CLL4_9STRA	5.060e-211	88.56	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YJA4_9STRA	4.140e-201	85.90	Uncharacterized protein n=4 Tax=Tribonema minus Ta...	[more]
A0A836CHX2_9STRA	2.140e-119	95.61	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCV7_9STRA	3.510e-80	76.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_151	contig	Contig_151:190798..191929 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353234	mRNA_15174	Tribonema minus UTEX_B_3156	mRNA	Contig_151 190711..191929 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353234|estExt_Genemark1.C_Ctg_1510029 ID=Trimin1|353234|estExt_Genemark1.C_Ctg_1510029|Name=jgi.p|Trimin1|353234|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=359bp
MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALEDKIGAMAGSMQD
VVAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPITLPI
KLTGGQRVSKLHDVLARTAVYVDQKVANMLWDVSNLQPMAFFIPRSGHSQ
RQGDCELTRLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISD
ADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIP
TVAWTNAARALEVNGDIAARAVAAARKRKYDGAFGGGGRPVGSGGGGAGA
GGGAGAAAGAGGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVLCNVVPGP
CKYRHFDT*