Trimin1|347759|estExt_Genemark1.C_Ctg_150146 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347759
Unique NameTrimin1|347759|estExt_Genemark1.C_Ctg_150146
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length82
Homology
BLAST of jgi.p|Trimin1|347759 vs. uniprot
Match: A0A835ZD61_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD61_9STRA)

HSP 1 Score: 172 bits (437), Expect = 8.790e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MPSSCLCTSLPAAAPSTASRPRWRTTHLGWRMSPSPSSSTRSGPRRHYQMTMTTMTWSEGACPACVNTYIPCACKYNDRSRW 82
            MPSSCLCTSLPAAAPSTASRPRWRTTHLGWRMSPSPSSSTRSGPRRHYQMTMTTMTWSEGACPACVNTYIPCACKYNDRSRW
Sbjct:    1 MPSSCLCTSLPAAAPSTASRPRWRTTHLGWRMSPSPSSSTRSGPRRHYQMTMTTMTWSEGACPACVNTYIPCACKYNDRSRW 82          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347759 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZD61_9STRA8.790e-55100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1253926..1256356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347759mRNA_3999Tribonema minus UTEX_B_3156 mRNAContig_15 1253907..1256356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347759|estExt_Genemark1.C_Ctg_150146 ID=Trimin1|347759|estExt_Genemark1.C_Ctg_150146|Name=jgi.p|Trimin1|347759|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=82bp
MPSSCLCTSLPAAAPSTASRPRWRTTHLGWRMSPSPSSSTRSGPRRHYQM
TMTTMTWSEGACPACVNTYIPCACKYNDRSRW
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