Trimin1|353030|estExt_Genemark1.C_Ctg_1410030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353030
Unique NameTrimin1|353030|estExt_Genemark1.C_Ctg_1410030
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length325
Homology
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A835Z880_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z880_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 1.100e-221
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
Query:    1 MAKGKILENLREEEESNSTATPAEQDDRGSFDKSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNAKVDDMGRRLVE 324
            MAKGKILENLREEEESNSTATPAEQDDRGSFDKSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNAKVDDMGRRLVE
Sbjct:    1 MAKGKILENLREEEESNSTATPAEQDDRGSFDKSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNAKVDDMGRRLVE 324          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A6H5JEG6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEG6_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 4.790e-64
Identity = 135/308 (43.83%), Postives = 192/308 (62.34%), Query Frame = 0
Query:   13 EEESNSTATPAEQDDRGSFDKSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESET-----KNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNR-EIFTANNLLIVPVQVADPSDPTAAV-TDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQG--NSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYP 311
            +E+ +  ATPA       F+  KL AE  TPFRT R+FIYGAF  SALIGG+T+ TQLAA++++Q  AL L + L+N+ VDFGV+A   + YNFE  Q++ L + + A RE+    K + I  +V   RV++LR L +++  S +       K  P+GVLM EA           KQ   ++AGGKE +RD++L A + + +IF + NLL+VPV++   SD   A    KGFG   +Y +QG+V  P +ED WRAL+ EE   A+RQG     + K G+VL+VS+ GKVLRRG+G+P W++IR D+ P
Sbjct:  110 DEQDDEVATPA-------FNIDKLKAETKTPFRTFRIFIYGAFGVSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITSDVNADRVKQLRALSVKVPGSGNGAELEGAKEAPVGVLMDEA-----------KQAFCVLAGGKEFVRDSILAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMREEFEAAERQGVVAQSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDP 399          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A4D9D4V0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4V0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.440e-43
Identity = 104/300 (34.67%), Postives = 156/300 (52.00%), Query Frame = 0
Query:   35 KLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTA----------AVTDKGFGAKPAYF-KQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNAKVDDMGRRLV 323
            KL +E + PFR+LRLFIYG     A +GG TA TQL  S+ ++ DALPLSQ +LNVGVDFGV A    A+ FEN+ +Q   ++ +A R +   R    +  ++ K+R   L  L +   V  +ETK+  +  L ++             Q ++++A  K  L DA+  A V + +F  NN++I P  +   +D              ++DK  G K A    + +V +PAE   W   + EE+ DA RQGN  A K G+ +V+ +DG ++RRGLG P W  +  +L       + G   V
Sbjct:   20 KLRSEATAPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDKEMQALRAKEPFR----LTFDMKKARERALSGLPVTFKVGLNETKSASVKDLREKGG-----------QHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKAGEEASSVKGFGGMSDKATGMKEAMIDSEAYVAKPAESASWATYIDEELEDAVRQGNEIARKTGIGIVMRKDGSIIRRGLGQPDWKEVVAELTGAKGTSEFGDAYV 304          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: W7TV54_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV54_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.170e-42
Identity = 103/300 (34.33%), Postives = 158/300 (52.67%), Query Frame = 0
Query:   35 KLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTA----------AVTDKGFGAKPAYF-KQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNAKVDDMGRRLV 323
            KL +E +TPFR+LRLFIYG     A +GG TA TQL  S+ ++ DALPLSQ +LNVGVDFGV A    A+ FEN+ +Q   ++ +A R +   R    +  ++ K+R   L  L +   V  +ET++  +  L ++             Q ++++A  K  L DA+  A V + +F  NN++I P  +   +D T            ++DK  G K A    + +V +PA+   W   + EE+ DA RQGN KA   G+ +V+ +DG ++RRG+G P W  +  +L       + G   V
Sbjct:  192 KLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDKEMQALRAKEPFR----LTFDMKKARERALSGLPVTFKVGLNETRSASVKDLREKGG-----------QHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDAYV 476          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A7S4A636_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A636_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.520e-39
Identity = 106/284 (37.32%), Postives = 147/284 (51.76%), Query Frame = 0
Query:   33 KSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNAKVD 316
            K+KL  E  +P+RT+R FIYGAFA SA +GGLTA TQLAA+V+ Q DALPL Q + NV VDFGVVA C Y    +     GL E   A          + I +E   + +  L++L++  TV+     NV                   A Q VV+VAG   ++ DA+  A + ++   A  +L+VPV+ +      AA+     G +   +  GFV  P +  +W+A  A E   A  QG   AA+ G+V+ V  DG V RRGLG P W M+  +L P  K +
Sbjct:   77 KAKLLQEAESPWRTVRKFIYGAFALSATVGGLTALTQLAAAVSKQPDALPLEQTIQNVVVDFGVVAACAYGAKVDGAADSGLEEDDGAP--------STTIDDEAIAANLATLQKLEV--TVAGERVANVET-------------LRTAANQAVVVVAGPSSVVDDALRDALIEQKTLAAAEVLVVPVRTSAEDAVEAAM-----GRRSDSY--GFVAPPVDAAKWKAYAAAECAVAAGQGAETAAEDGIVIAVRADGTVARRGLGKPVWKMVAAELSPPKKEE 330          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A7S2M8S3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M8S3_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.920e-34
Identity = 94/279 (33.69%), Postives = 145/279 (51.97%), Query Frame = 0
Query:   35 KLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGL---VEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSES-ETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDL 309
            KL AE   PFR LRLF Y AFA+ A +GGL   + +AA+++     + L+   LN+G+DFG VA+      F+  + + L   VE K  ER++A  +  S +     K R ++L +L I + V+E  +TK   +G +   A           KQ +++VAG    +RDA+  A +N+  F   N+L+VP +        A+    GFG +P Y  Q +V E   E  W + +  E+  A  Q   K  ++G+ LV++ DGKVLRRG+G   W  +  +L
Sbjct:   64 KLLAETIAPFRGLRLFFYAAFASGAFVGGLITASGVAAALSGVRTDVDLNTEYLNLGIDFGAVALFAVLAKFDLNKGEELNAAVEAK-VERKKAMKKITSAM-----KEREQQLADLNINVRVTEEGDTKTATMGTMQSMA-----------KQHIIMVAGPGRAIRDALRGAQLNKVNFAMTNILVVPYETGLDEAARASKPSGGFGDRPTYETQAYVAEAVGEG-WESFIEAEMETAAEQAGEKVREEGIALVIANDGKVLRRGVGRVPWRQMVDEL 324          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A7S1TN68_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TN68_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.100e-30
Identity = 95/290 (32.76%), Postives = 153/290 (52.76%), Query Frame = 0
Query:   39 EVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQD----------VVLVAGGKEMLRDAMLRATV-NREIFTANNLLIVPVQV-----ADPSDPTAAVTDKGFGA-KPAYFKQGFVGEPAE--EDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDL 309
            E+++PFR LR F+YGA      +G LTA +QLAA V+    A  +++   N  +DF VVA  +  + F++KQR    EQK    E    R +  + ++   +++  LREL + L++++++   VP G    E   GL     +AK D          VV  +   E +++A+++A +   + F   N+LIVPV++     A      A+   KGFGA  P + +QG+V  PA   E  W   V +EI DA+ QG    AK+G+ + + ++  V RRGLG+P W+ +  +L
Sbjct:  125 EITSPFRGLRFFVYGAGFLGGGVGFLTALSQLAAGVSGVEGAPEVAKSATNAAIDFAVVAAAIAGWRFDSKQR----EQKIGALEDVETRNRGKVTDDAATAKLAALRELNVMLSIADAD---VPEGFSAPEGAVGL-----KAKVDDLLGKASSSVVVFASTSGERVKEALVKAQILGEQEFLNKNVLIVPVELEKLRRAARGAAGASTEKKGFGATSPVWMEQGYVAPPAPGTEKAWLEYVEQEIADAEAQGAVNPAKEGIAICLRKNKTVSRRGLGVPLWEDVINEL 402          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A7S2N0T1_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0T1_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.730e-30
Identity = 86/279 (30.82%), Postives = 148/279 (53.05%), Query Frame = 0
Query:   33 KSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVE--QKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDL 309
            +SKL  E   P+RTLRLF+Y +  + AL+GG    + +AA ++   D + L+   LN+ +DFG      +   ++  +   L E  +K+ ER++   +  + + E     R +RL +L + + VS+           +Q            AKQ +V+VAG ++ +RDA+L A   +  F   NLL+VP ++++ ++     +  GFG +PAY  Q +V E    D W   + EE+ DA +QG  K  ++G+ +V++ DGKV+RRG+G   W  + ++L
Sbjct:   81 RSKLLTESIAPWRTLRLFLYASLGSGALLGGFITLSGVAAFLSGVRDDVDLNTEYLNLAIDFGAAIAFAFLAKWDFDKGAELSENVEKKLERKKEQRKITNAMRE-----REDRLSKLSLNVRVSDGGDMQTATVSALQSG----------AKQHMVIVAGNRKAIRDALLGANFLKMEFAVRNLLVVPYEISEETEKQVRPSG-GFGERPAYETQPYVAEVVG-DGWEEYIEEEMIDAVKQGGEKVKEEGIAIVLANDGKVIRRGVGTVPWRKMVEEL 342          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: F0Y9V5_AURAN (C2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9V5_AURAN)

HSP 1 Score: 131 bits (330), Expect = 2.350e-30
Identity = 100/299 (33.44%), Postives = 151/299 (50.50%), Query Frame = 0
Query:   33 KSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPA-----YFKQGFVGEPAEEDE--WRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNAKVDDMGRRLVE 324
            KSKL  E  TP+RT+R F YGAF  SA +GG+TA  Q AASVA Q DALPLSQC +NV VD GVVA C+Y  + +N +   +              + + + ++V ++R + + +L++          +V LG L + A   +     +A Q VV++ G +  + DA+L A + R  F     ++VPV++           D G GA PA       +  FV  P  +D   WR+ + +E+  A  QG   +A  GVV+ + RDG V  R +G P W  +   +   A+V   G   ++
Sbjct:   51 KSKLLQEAQTPWRTVRTFFYGAFGLSATVGGITALAQTAASVAGQPDALPLSQCGVNVLVDAGVVAACLYGNSVDNGEAADIT----------VADETAPLADDVAEARRDAVAKLRV----------DVGLGDLKRSA--AVRTLQRDAGQAVVVLGGPRAAVDDALLDALIQRNAFARAECVVVPVRL-----------DDGAGAAPATNALTVDEAPFVALPNADDAAAWRSYLEDELATAADQGADTSA--GVVVALRRDGTVASRNVGKPPWPQLIAAIDAKAEVAANGHATMD 314          
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Match: A0A7R9YFC6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFC6_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.330e-29
Identity = 94/290 (32.41%), Postives = 157/290 (54.14%), Query Frame = 0
Query:   35 KLAA---EVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAG-GKEMLRDAMLRATVNREI-FTANNLLIVPVQVADPSDPTA---AVTDKGFGA-KPAYFKQGFVGEPAE--EDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYPNA 313
            K+AA   E+++PFR LR F+YGA      +GGLTA +QL   +    +A P+SQ L NV +D  VVAV V  +  ++ Q+    E KR   + A  R+   + +     ++  L ELQ+ L+V E +    P G +  +A+   +L   +A Q VV+ A    E +++ +++A +  E  F++ N+L+VPV++           +  +KGFG+    + +Q +V  PA   E  W   + +E+ DA+ QG  +AAK+G  + V ++  V RRGLG+P W+ +  +L  +A
Sbjct:   63 KMAAFQEEITSPFRGLRFFLYGAGFLGGGLGGLTALSQLIGGLGGGANAPPVSQSLQNVAIDLAVVAVAVLGWRADSTQQ----EAKREALKTAGERRSGAVTDSDAAEKLRMLCELQVLLSVDEQDA---PKGAVGLKAKLDDMLG--QANQGVVVFATTSAERMKEVLVKAQILGEPEFSSKNVLVVPVEMEKLRQAVRGGRSTENKGFGSTSQIWLEQSYVAPPAPGAEKAWLEYIEKELADAEAQGAKEAAKEGFAICVRKNKTVARRGLGVPIWEDVLSELNASA 343          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353030 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z880_9STRA1.100e-221100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JEG6_9PHAE4.790e-6443.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D4V0_9STRA3.440e-4334.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TV54_9STRA3.170e-4234.33Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S4A636_9STRA1.520e-3937.32Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2M8S3_9STRA6.920e-3433.69Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1TN68_9STRA1.100e-3032.76Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2N0T1_9STRA1.730e-3030.82Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
F0Y9V5_AURAN2.350e-3033.44C2 domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A7R9YFC6_9STRA5.330e-2932.41Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021883Protein LOW PSII ACCUMULATION 1-likePFAMPF11998DUF3493coord: 33..107
e-value: 1.1E-21
score: 76.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availablePANTHERPTHR35498:SF4PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTICcoord: 30..309
NoneNo IPR availablePANTHERPTHR35498PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTICcoord: 30..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_141contigContig_141:172141..176525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353030mRNA_13375Tribonema minus UTEX_B_3156 mRNAContig_141 172141..176900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353030|estExt_Genemark1.C_Ctg_1410030 ID=Trimin1|353030|estExt_Genemark1.C_Ctg_1410030|Name=jgi.p|Trimin1|353030|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=325bp
MAKGKILENLREEEESNSTATPAEQDDRGSFDKSKLAAEVSTPFRTLRLF
IYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVC
VYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQI
RLTVSESETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAM
LRATVNREIFTANNLLIVPVQVADPSDPTAAVTDKGFGAKPAYFKQGFVG
EPAEEDEWRALVAEEIRDADRQGNSKAAKQGVVLVVSRDGKVLRRGLGMP
KWDMIRQDLYPNAKVDDMGRRLVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021883LPA1-like