Trimin1|353013|estExt_Genemark1.C_Ctg_1400042 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353013
Unique NameTrimin1|353013|estExt_Genemark1.C_Ctg_1400042
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length240
Homology
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 1.650e-143
Identity = 222/257 (86.38%), Postives = 224/257 (87.16%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 240
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRA RAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTT C+LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:   84 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRALRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTFCYLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 340          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.070e-141
Identity = 224/257 (87.16%), Postives = 226/257 (87.94%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 240
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  209 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 465          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 1.790e-131
Identity = 223/300 (74.33%), Postives = 225/300 (75.00%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYP-------------------------------------------SMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 240
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYP                                            MFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  261 QDQVERAMEFGLDVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPFVCFTDRLSSQAIGVKAQACERNQQCKYAGYKLYQEARHIAAQEMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 560          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835Z031_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z031_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.790e-125
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query:   59 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 240
            MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZEP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP9_9STRA)

HSP 1 Score: 357 bits (916), Expect = 1.320e-123
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0
Query:   59 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 240
            MFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZA29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA29_9STRA)

HSP 1 Score: 320 bits (821), Expect = 8.240e-108
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 0
Query:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYT 163
            MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA  T
Sbjct:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITASTT 163          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZD50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD50_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.270e-98
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 161
            QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR
Sbjct:  104 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 251          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZIG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIG4_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.530e-54
Identity = 104/198 (52.53%), Postives = 131/198 (66.16%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 211
            QDQVERA EFGLDVI Q            W   H++K V G    +  SL       PTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +   L+ +Y +LL VA+QDGT HC +
Sbjct:   26 QDQVERANEFGLDVIMQ------------W---HFMKNVKG---KLLSSLGAAWEATPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVVPVLRIMYSSLLDVAQQDGTLHCLR 203          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZDE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE2_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.930e-54
Identity = 103/198 (52.02%), Postives = 129/198 (65.15%), Query Frame = 0
Query:   14 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 211
            QDQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+L LGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  200 QDQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILILGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 367          
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A836CNV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.510e-53
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 0
Query:   15 DQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 211
            DQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  339 DQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 505          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353013 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A835Z0Q7_9STRA1.650e-14386.38SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CA74_9STRA1.070e-14187.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7W2_9STRA1.790e-13174.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z031_9STRA2.790e-125100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZEP9_9STRA1.320e-12398.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA29_9STRA8.240e-10897.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZD50_9STRA3.270e-9899.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIG4_9STRA1.530e-5452.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDE2_9STRA6.930e-5452.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNV1_9STRA7.510e-5352.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_140contigContig_140:398924..403940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353013mRNA_15662Tribonema minus UTEX_B_3156 mRNAContig_140 398924..403941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353013|estExt_Genemark1.C_Ctg_1400042 ID=Trimin1|353013|estExt_Genemark1.C_Ctg_1400042|Name=jgi.p|Trimin1|353013|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp
MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVK
MVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKY
LNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCH
LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLV
ARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
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