mRNA_15662 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353013
Unique Name	mRNA_15662
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 1.650e-143
Identity = 222/257 (86.38%), Postives = 224/257 (87.16%), Query Frame = 1

Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRA RAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTT C+LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:   84 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRALRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTFCYLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 340

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.070e-141
Identity = 224/257 (87.16%), Postives = 226/257 (87.94%), Query Frame = 1

Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  209 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 465

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 1.790e-131
Identity = 223/300 (74.33%), Postives = 225/300 (75.00%), Query Frame = 1

Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYP-------------------------------------------SMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYP                                            MFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  261 QDQVERAMEFGLDVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPFVCFTDRLSSQAIGVKAQACERNQQCKYAGYKLYQEARHIAAQEMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 560

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835Z031_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z031_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.790e-125
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1

Query:  175 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZEP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP9_9STRA)

HSP 1 Score: 357 bits (916), Expect = 1.320e-123
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 1

Query:  175 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            MFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZA29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA29_9STRA)

HSP 1 Score: 320 bits (821), Expect = 8.240e-108
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 1

Query:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYT 489
            MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA  T
Sbjct:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITASTT 163

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZD50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD50_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.270e-98
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1

Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 483
            QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR
Sbjct:  104 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 251

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZIG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIG4_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.530e-54
Identity = 104/198 (52.53%), Postives = 131/198 (66.16%), Query Frame = 1

Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            QDQVERA EFGLDVI Q            W   H++K V G    +  SL       PTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +   L+ +Y +LL VA+QDGT HC +
Sbjct:   26 QDQVERANEFGLDVIMQ------------W---HFMKNVKG---KLLSSLGAAWEATPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVVPVLRIMYSSLLDVAQQDGTLHCLR 203

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZDE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE2_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.930e-54
Identity = 103/198 (52.02%), Postives = 129/198 (65.15%), Query Frame = 1

Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            QDQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+L LGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  200 QDQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILILGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 367

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A836CNV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.510e-53
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 1

Query:   43 DQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            DQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  339 DQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 505

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A835ZK91_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK91_9STRA)

HSP 1 Score: 774 bits (1999), Expect = 2.210e-278
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 3

Query:   87 MSGSARHLHYHHQQGQHRAACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAGAGDDSGAGPIRRFGRKVQDALSRLMAHMAKKTEEADKAKVAREAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAQQKPEGSKEP 1544
            MSGSARHLHYHHQQGQHRAACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAGAGDDSGAGPIRRFGRKVQDALSRLMAHMAKKTEEADKAKVAREAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAQQKPEGSKEP
Sbjct:    1 MSGSARHLHYHHQQGQHRAACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAGAGDDSGAGPIRRFGRKVQDALSRLMAHMAKKTEEADKAKVAREAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAQQKPEGSKEP 486

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: D8LIJ8_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ8_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 3.930e-97
Identity = 172/337 (51.04%), Postives = 228/337 (67.66%), Query Frame = 3

Query:  174 RQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVD-------GSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGR--GGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKL--RGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRG----RGDQYVHVKVEVPTPNQLTVAQRKLVEQLRE 1139
            RQ+ S+  A + D +Y+VLGV++ A   E+KK YF  AKKYHPD N+ + DAK +FQ+VTEAYE+L + +KR  YDQFG A VD       G GGGGDPF GFGG            G +   +++DPQD+F   E++FG   GG Q+  RGPR GQ+LQ+ + + FL+A FG  R ++V Y +   GK  RKT+ V V++P GVE G+   + GEGAEGEKG+P GDL VQ+ VA DPYF R GAD+HV A VS+AQA LGGKVD++T++GMVE+T+P G  PD VLM+R RG+  L+G G    RG+Q VH+++ +PT  +L   QRKL+E LRE
Sbjct:   96 RQFHSTRPAEKRD-FYDVLGVAKGADKSEVKKKYFQLAKKYHPDQNKDNPDAKAKFQEVTEAYEVLSDSDKRSRYDQFGHAGVDPNNAGAGGPGGGGDPFAGFGGFRGGPFQ----QGGFQSNVDIDPQDLF---EQLFGAQMGGRQRRPRGPRPGQDLQLRMKLSFLEAAFGTNRSLDVTYHVVEGGKRRRKTRSVKVEVPGGVESGIAIHVRGEGAEGEKGAPNGDLYVQLEVAPDPYFERSGADLHVTADVSIAQAALGGKVDIMTIDGMVEVTIPKGAQPDAVLMLRGRGLPRLTGSGASAGRGNQLVHLRILIPT--KLNDRQRKLMEDLRE 422

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A448ZBY7_9STRA (J domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBY7_9STRA)

HSP 1 Score: 252 bits (644), Expect = 3.030e-74
Identity = 143/323 (44.27%), Postives = 205/323 (63.47%), Query Frame = 3

Query:  141 AACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGS----GGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNR----KTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP 1085
            AA     A  +R + SSGA R   + Y VLGV +SA   +IKKAYF  AK+YHPD N+  + A ++F++ T AYE L + E+R+MYDQFG AA D +       G+PFGGFG            SG  G+   +DP+++F AF      G   +  RGP+RG +LQ+ + + F +AV GA + +N+ Y++  + N     K + V VD PPG+++GM  ++ GEGAEG+ G+P+G+LLVQV V +D YF RDG+++H EA +S+ QAILGG VDV TL+G VE+ +P G  PD  LM+R +G++ L G  +GD  VH+K+E+P
Sbjct:   83 AAAKHNRASNLRSF-SSGAKR---DLYEVLGVPKSANKADIKKAYFKLAKQYHPDTNKDDEGAAEKFKEATAAYETLSDDEQRKMYDQFGHAATDPNFQQQQQQGNPFGGFG--FQDGGFHFHSSGGGGE---IDPEELFDAFF-----GXXXRRRRGPQRGSDLQMHVRLSFKEAVQGASKNLNLRYQVMNRENGQIEIKERDVTVDTPPGIDNGMNLRLSGEGAEGDPGAPRGNLLVQVLVDEDDYFVRDGSNVHTEAMISITQAILGGTVDVKTLDGEVEVKIPKGCQPDAKLMLRGKGIQKLHGASKGDHVVHLKIEIP 391

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A812VKF9_SYMMI (DnaJ protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VKF9_SYMMI)

HSP 1 Score: 248 bits (632), Expect = 5.770e-74
Identity = 149/325 (45.85%), Postives = 210/325 (64.62%), Query Frame = 3

Query:  210 DEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGK-GNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAG 1181
            ++YYN+LG+ + A+  EIKK YF  AKK+HPD N+    A+ +F+++TEAYE+L + +KRQ+YD +G A VDGS            XXXXXXXXXXX    G    VD  ++F  FE MFG      GA   +RG+++Q  L + F +AV G  +EVNV Y  R   G  KTK V V +P GV+DG+V +++GEG +G  G   GDL +++ V  DPYF RDG ++HVE  +S+ QAILGG VDVLTL+GMVE+ VP GT PD  L++R +G+K L+   RGDQY+H+K+ +P   +++  Q++L   LR+ E+ + +G S   G
Sbjct:    4 EDYYNILGIDKGASKSEIKKKYFELAKKFHPDVNK-EPSAEIKFKQITEAYEVLEDDQKRQLYDSYGHAGVDGSAXXXXXX-----XXXXXXXXXXXXXXXGHAQQVDADELFEMFEGMFG------GAGARQRGRDVQQVLQLSFFEAVNGCTKEVNVKYTDRNAPGTTKTKTVKVAVPAGVDDGVVMRVQGEGGQGLPGKGSGDLRLEIRVKKDPYFVRDGPNVHVEQPISITQAILGGVVDVLTLKGMVEVKVPQGTQPDAKLVLRGKGIKDLNSIHRGDQYIHLKIRIP--KKVSDRQKEL---LRKFEIEDSEGGSGGVG 311

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A1E7FR18_9STRA (DnaJ_C-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR18_9STRA)

HSP 1 Score: 246 bits (628), Expect = 9.870e-74
Identity = 132/301 (43.85%), Postives = 191/301 (63.46%), Query Frame = 3

Query:  213 EYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGS------GGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNR----KTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP 1085
            + Y VLGV RS+   E+KKAYF  AKK+HPD N+  + A  +F++ T AYE L + ++R++YDQFG AA D +           PFGG GG            G  G    +DP ++F AF   FG G  ++  RGP+RG +LQ+ + + F +AV GA +++++ Y++  + N     K + V VD PPG+++GM  ++ GEGAEG+ G+P+G+LLVQV V +D YF RDGA++H EA +S+ QAILGG VDV TL G VE+ VP G  PD  LM+R +G++ L G  +G+  VH+K+E+P
Sbjct:    3 DLYEVLGVPRSSDKGEVKKAYFKLAKKFHPDTNKDDEKAADKFKEATAAYETLSDDKQRKLYDQFGHAATDPNFQQXXXXXXXXPFGGAGGGFNFQDGSFHFGGQGGAGGEIDPDELFEAF---FGGGSRRR--RGPQRGSDLQMHVRLSFQEAVKGASKDLHLRYQVMNRENGQVEIKERDVKVDTPPGIDNGMNLRVSGEGAEGDAGAPRGNLLVQVLVDEDDYFVRDGANVHTEAPISITQAILGGTVDVKTLNGEVEVKVPQGCQPDMQLMLRGKGIQKLHGASKGNHVVHLKIEIP 298

[Close]

BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A7S3VBQ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBQ1_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.450e-73
Identity = 145/311 (46.62%), Postives = 201/311 (64.63%), Query Frame = 3

Query:  213 EYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGG----GGDPFGGFGGXXXXXXXXXXXSGMY---GQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLR----GKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDP--YFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP---TPNQ 1097
            ++Y  L V +SA    +KKAYF  AK+YHPD N+G + A ++F+KVTEAYE+L + ++R++YD +G A VD + G    GG+PFGG   XXXXXX     S  +   G    +DP+D+F AF       G  +  RGPRRG +LQ+ +N+ F+DAV G KR++NV Y+LR    G+   K + V   IP G++ GM  ++ G+GAEG+ G+P+GDL+V V V +D   YF R+GAD+HVE  VS+ QAILGG VDV TL G  E+ +P G  PDT LMMR +G+  L    +G+Q VH+K+E+P   TP Q
Sbjct:   94 DFYTTLNVPKSADKASVKKAYFKLAKEYHPDTNKGDEKASEKFKKVTEAYEVLSDDKQRELYDNYGHAGVDPNSGFNQQGGNPFGGXXXXXXXXXGFNDGSFHFHSSGGGQQIDPEDLFDAFF------GGSRRQRGPRRGADLQMHVNLPFMDAVLGVKRDLNVRYQLRDPVSGRVEVKERSVECSIPAGIDSGMNLRLGGQGAEGDPGAPRGDLMVTVIVEEDENDYFQRNGADVHVEIPVSVTQAILGGSVDVKTLTGTAEMKIPQGCQPDTKLMMRGKGIPYLKSSQKGNQIVHLKIEIPQKVTPKQ 398

[Close]

BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A7S3DRQ6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DRQ6_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.580e-73
Identity = 141/338 (41.72%), Postives = 218/338 (64.50%), Query Frame = 3

Query:  186 SSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGS--GGGGDPFG-GFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKL----RGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAA 1178
            SSG  R   ++Y VLGV +SA    IKKAYF  AK++HPD NQG+D A  +F++ TEAYE+L + ++R+MY+QFG A VD +  G  G+PFG GF G            G  G+   +D ++IF  F    G G  ++ +RGPRRGQ+LQ+ + + F++AVFG ++++++ Y+      G  + K ++V V IP G+++GM  +++G+GAEG+ G+  G+LLVQV V  DP F RDG D+H E  +++ QA+LGG VDV TL+G VE+ +P G  PD  L++R +G++ L+G  +G+ YVHVK+E+P   +++  Q +L+ +  E    + +G + AA
Sbjct:  129 SSGGKR---DFYEVLGVPKSADKATIKKAYFKLAKQHHPDTNQGNDKAADKFKEATEAYEVLSDDKQREMYNQFGHAGVDPNFQGADGNPFGEGFEGFNFQDGSFHFQGGGPGE---MDAEEIFDMFFGSQGGGSRRRRSRGPRRGQDLQMHVRVSFMEAVFGTEKDLDLRYQQVNSKTGSVSVKERKVNVKIPAGIDNGMNLRLQGQGAEGDPGAQSGNLLVQVIVDSDPNFERDGYDVHTEVPINIIQAVLGGTVDVKTLKGEVEMKIPKGCQPDAKLLLRGKGIQELNGHRKGNHYVHVKLEIP--KEISKRQEELLREFEEEGKPKSKGFAKAA 458

[Close]

BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A1Z5K114_FISSO (Curved DNA-binding protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K114_FISSO)

HSP 1 Score: 246 bits (627), Expect = 1.900e-72
Identity = 144/333 (43.24%), Postives = 201/333 (60.36%), Query Frame = 3

Query:  144 ACGFAP----------AGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFG-----GXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKL----RGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP 1085
            AC F P           G   Q R   +A + D +Y VLGVSR+A   EIKKAYF  AK+YHPD N+   +A ++F+ VTEAYE+L + ++R +YDQFG A VD +   G+P          G               GQ I  DP+D+F  F   FG G  ++  RGPRRG +LQ+ + + F +AVFG  +++N+ Y++     G+   K K+V V IPPG++ GM  ++ G+GAEG+ G+P G+LLVQV V  D YF RDG D+H E  +S+ QAILGG VDV TL G VE+ +P G  PDT LM+R +G++ L G  +G+Q VH+K+++P
Sbjct:    3 ACSFRPQENYFRXXXNCGSPSQVRCFSSAGKKD-FYEVLGVSRTADKAEIKKAYFKLAKQYHPDTNRDDKEAAEKFKTVTEAYEVLSDEKQRGLYDQFGHAGVDPNFQAGNPXXXXXXXXXXGFNFNDGSFHFHGSAGGQEI--DPEDLFDMF---FGSG--RRRPRGPRRGSDLQMQVRLTFQEAVFGVDKDLNLQYQVVDRKTGQVEVKDKEVTVSIPPGIDTGMNIRLAGQGAEGDPGAPAGNLLVQVIVDPDDYFERDGFDVHTEVPISVTQAILGGTVDVRTLSGEVEVKIPKGCQPDTKLMLRGKGIQELRGTRKGNQVVHLKLQIP 327

[Close]

BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A7S2LGX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGX2_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.200e-70
Identity = 140/299 (46.82%), Postives = 200/299 (66.89%), Query Frame = 3

Query:  213 EYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVD----GSGGGGDPFGGFG-GXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQ--VMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRG-RGDQYVHVKVEVP 1085
            ++Y VLGVS+ A   EIKKAYF  AK+YHPD N+ + +A ++F++ T AYE+L + +++++YD +G A VD       G GD F GF  G XXXXXXXXXX        + D +D+F AF   FG G   +  RGPRRG +LQ+ +N+ F +AVFG+ +++ + Y++R      TK+  V V+ P GV+ GM  +++G+GAEG+ G+P+G+LLVQV V +D YF RDG D+H E  +S  QA+LGG VDV TL G+VE+ +P G  PDT LM+R +G+  L G G RG+Q  H+K+E+P
Sbjct:   17 DFYEVLGVSKGADKGEIKKAYFKLAKEYHPDRNKDNPEAAEKFKEATAAYEVLSDEKQKELYDSYGHAGVDPNFQAGQGFGDGFAGFDFGGXXXXXXXXXXXXXXXXAHDADIEDLFEAF---FGGGAGGRRQRGPRRGSDLQMRVNLSFQEAVFGSSKDLKLKYQVRENDRYVTKEREVTVETPAGVDTGMNLRLQGQGAEGDPGAPRGNLLVQVIVEEDEYFHRDGFDVHTEVPISFVQAVLGGTVDVRTLTGIVEMKIPSGCQPDTKLMLRGKGIPRLHGNGGRGNQIAHLKIEIP 312

[Close]

BLAST of jgi.p|Trimin1|353013 vs. uniprot
Match: A0A7S2UKR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKR1_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.260e-70
Identity = 144/338 (42.60%), Postives = 215/338 (63.61%), Query Frame = 3

Query:  165 GQIRQYRS-SGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVD-GSGGGG-----DPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLR----GKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDP--YFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRE 1139
            G+ +Q RS S +A+RD  +Y VL V+R A    +KKAYF  AKKYHPD N   D A  +F++ TEAYE+L + ++R++YD +G A VD  SG GG     +PF GF              G  G+   +DP+++F AF   FG GG  +  RGPR+G +LQ+ + + F +AVFGA +++++ Y+LR    G+ + K ++V VD P G+++GM  ++ G+GAEG+ G+ +G+LLVQV V +D   YF RDG DIH EA +SL QA+LGG VDV TL G+VE+ +P G   D+ L++R +GV+ L    +G+  VH+K+E+P   ++T  Q +L+ +  E
Sbjct:   15 GKTQQVRSLSSSAKRD--FYEVLNVARGADKGTVKKAYFKLAKKYHPDTNTDDDSAADKFKEATEAYEVLSDPKQRELYDNYGHAGVDPNSGFGGXXXXXNPFEGF--NFNDGSFHFSQGGPGGE---IDPEELFDAF---FG-GGRSRRPRGPRKGADLQMHVRLTFQEAVFGASKDLHLRYQLRDSSTGQSSIKEREVTVDTPAGIDNGMNLRLSGQGAEGDPGASRGNLLVQVIVDEDKDGYFQRDGVDIHTEAPISLTQAVLGGMVDVRTLTGVVEMKIPKGCQIDSKLLLRGKGVQRLQSTSKGNHIVHLKMEIP--KKITPRQEELLREFDE 339

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353013 vs. uniprot
BLAST of jgi.p|Trimin1|353013 vs. uniprot

BLAST of jgi.p|Trimin1|353013 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
A0A835Z0Q7_9STRA	1.650e-143	86.38	SWIM-type domain-containing protein n=1 Tax=Tribon...	[more]
A0A836CA74_9STRA	1.070e-141	87.16	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z7W2_9STRA	1.790e-131	74.33	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z031_9STRA	2.790e-125	100.00	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZEP9_9STRA	1.320e-123	98.90	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZA29_9STRA	8.240e-108	97.55	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZD50_9STRA	3.270e-98	99.32	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZIG4_9STRA	1.530e-54	52.53	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZDE2_9STRA	6.930e-54	52.02	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CNV1_9STRA	7.510e-53	52.28	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

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BLAST of jgi.p|Trimin1|353013 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZK91_9STRA	2.210e-278	100.00	J domain-containing protein n=1 Tax=Tribonema minu...	[more]
D8LIJ8_ECTSI	3.930e-97	51.04	Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=287...	[more]
A0A448ZBY7_9STRA	3.030e-74	44.27	J domain-containing protein n=1 Tax=Pseudo-nitzsch...	[more]
A0A812VKF9_SYMMI	5.770e-74	45.85	DnaJ protein n=1 Tax=Symbiodinium microadriaticum ...	[more]
A0A1E7FR18_9STRA	9.870e-74	43.85	DnaJ_C-domain-containing protein (Fragment) n=1 Ta...	[more]
A0A7S3VBQ1_9STRA	1.450e-73	46.62	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S3DRQ6_9STRA	1.580e-73	41.72	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A1Z5K114_FISSO	1.900e-72	43.24	Curved DNA-binding protein n=2 Tax=Fistulifera sol...	[more]
A0A7S2LGX2_9STRA	2.200e-70	46.82	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S2UKR1_9STRA	3.260e-70	42.60	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_140	contig	Contig_140:398924..403941 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353013\|estExt_Genemark1.C_Ctg_1400042
Hectar predicted targeting category	other localisation
TranscriptId	353335
Track	FilteredModels1
ProteinId	353013

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353013	gene_15662	Tribonema minus UTEX_B_3156	gene	Contig_140 398924..403941 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353013	Trimin1\|353013\|estExt_Genemark1.C_Ctg_1400042	Tribonema minus UTEX_B_3156	polypeptide	Contig_140 398924..403940 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15662_1	exon_15662_1	Tribonema minus UTEX_B_3156	exon	Contig_140 398924..398965 +
exon_15662_2	exon_15662_2	Tribonema minus UTEX_B_3156	exon	Contig_140 400000..400047 +
exon_15662_3	exon_15662_3	Tribonema minus UTEX_B_3156	exon	Contig_140 401250..401333 +
exon_15662_4	exon_15662_4	Tribonema minus UTEX_B_3156	exon	Contig_140 403125..403432 +
exon_15662_5	exon_15662_5	Tribonema minus UTEX_B_3156	exon	Contig_140 403703..403941 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15662	CDS_15662	Tribonema minus UTEX_B_3156	CDS	Contig_140 398924..398965 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_15662	UTR3_15662	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_140 403941..403941 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_140:398924..403941+
coding sequence from alignment at Contig_140:398924..403941+

spliced messenger RNA

>mRNA_15662 ID=mRNA_15662|Name=jgi.p|Trimin1|353013|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=721bp|location=Sequence derived from alignment at Contig_140:398924..403941+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGACCAGGT
TGAGAGGGCGATGGAGTTTGGCTTGGATGTCATTCAACAGGCGCTGCTGG
AACGTGAGGACACGGAGGCGTTTTCGTGGTTCTTTGTCCACTATGTGAAG
ATGGTCGGCGGCCACTATCCGTCCATGTTCAGGAGCCTTATGCAGCGCGC
ATCGCGTGCTCCTACGGAAGCCAGTTTTCAGGGGGCGCGGAAGGGACTGT
TGGACGCCCTAGTGGATGCTGGCGCCAGCGATGACGATGTCATGAAGTAC
CTCAACGACACGATCTACCCCATCCGGGAGCGCTGGGCATTCTGCTATCG
CCTTGGCGTCCTCACCCTCGGCATCAACTCTACTCAACGTTGCGAGGGGT
ACTTTGGCATCCTGAAAGCGGAACTGTTGAAGGTCACCACGCTCTGCCAC
CTGAAGCAAACGCTTGAAAATATCACTGCCAGGTACACCTCGGAAGATCA
TCTGTACATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGG
AGGGCATGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTG
GCGCGGCAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGT
GCGGTCTGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGC
TGACCGTGAACAGCGATGCTG

protein sequence of jgi.p|Trimin1|353013

>Trimin1|353013|estExt_Genemark1.C_Ctg_1400042 ID=Trimin1|353013|estExt_Genemark1.C_Ctg_1400042|Name=jgi.p|Trimin1|353013|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp
MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVK
MVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKY
LNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCH
LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLV
ARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA

mRNA from alignment at Contig_140:398924..403941+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15662 ID=mRNA_15662|Name=jgi.p|Trimin1|353013|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5018bp|location=Sequence derived from alignment at Contig_140:398924..403941+ (Tribonema minus UTEX_B_3156 )
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGTGAGACG
ATTTGCGACAGCACCCTTCGGGACTGCTGCAGCAGCTGTTGCTGTCTGTT
TTCATACATCCTGCTGCGGCACTCGCCACGCAGGAGTTCGCCACGCAGGA
ATAGCCGTCGTACACCTTCGCGTATCCAATATTGCGCGCCAGCCTGCGTT
CAACGTTGCTGCGACACCAGCCCATCATCCTGCTCCACTTCTACTCGTTG
GCAGTTGGTCCCACAGTAATAATACAGCCCTCACCCGCGTTCGGCGATGT
CTGACATGTCTGACACGGCCTCCTCGTTGCTCGTGATGCTTTCAATATTT
ATGACACAGGTCATTGCGGAGCTGCTAAACAGACGCTTTAATACTTCACA
GGAAGCGTTGAGCGCAGTCAAGCCATTGGCTGCAGCTGCTGGCTTCGTCG
CCTTAATGAGATCAAAGCATGCCAACAGCTACGACATCTACTGCAACCGT
GCGGGAAACCCCCCTGTGAAGCGGTCAGATCAATGCCCAGATGTCAAGGC
TCGGTCAGTAAAGCCTTGCATCAGGTGCGAGTGGCGGTTGAAAGTAGTGC
TTGAAACCTCTGTGGAGAACTCACAGCATGCCAACATTGGCCCCCAGTGG
CGTGTGAAGCTACCGGCCAACAACACCCCATGCTCCTTCAGGGAGGGCCA
CAACCATGACTTTGCCGTGCTTGCGGGATCACCACCACCATCTAATGCTG
GGCGCATCATCACCAAAGCAGAGCTCACTGAAGAGATCATTTCATGTGTG
CAGGCCCTGTGCGTTGCGCCCAACATGCGTGGCAAAACGCTGCAGCGTGC
TGTAGTCAGCCTGTATTTTGGTGGTGACTTTGCTGCAGTCTTTGACCAGC
CTGCCCTTCATGTGCTCAACAACACGGCAGCAAAGGTAGCAGATAGAATT
GCCTTCACAACAGGTGACTGCCAGGAGTTCATCAAACAGCTCGGCGCAGT
GCAGAAAGCTGGAGGATACGCGGAATACGAGTTAGCGGACGACTGCTCGT
TCAAGCGTGCTTTCTGAGCGACCCAGGACCAGGTTGAGAGGGCGATGGAG
TTTGGCTTGGATGTCATTCAACAGGTATGCACCTCTGTGTTTTGGCTTTA
GAACGGTGCAGATCCAAGCAGAATGGGGCAATTATCCTCGCCGTCAAGTG
CCCGCTACCAAATAGGTTGCAGTATTTCTGGCTTGGCCCGCCATTGCGAT
GAATTGATCATGGCTCGGTACAAGTCAACTGCAGTACTGCCAGAGACAAA
TACTGTTACAGTGTGAAGGTGGCAAGTACCTTGCACGATGCCTTACCAAT
ACAAGTAGTGGCGCAAGCATTCCTATGCAGCATGAATTGAATAACTTTGT
ATCTTTCTTTGCTTGCTTTTCATCATGCAGTTGATTCCAATGAAAAGAGA
TGACTTTGATGATGTCCATTCATTGTTTATCCGCAACAGCAACACCAAGC
AGCAGCTTCAATACTAATATGAATGCCGCAATTGAAATGATTTTGTATAC
AAGGGTTAACAGCAAATGCCAGAAATAGTGCCTTCATCATATCTTGAAGT
TGTGAAACTCGTGCATTGCATGCCTTTGCTCTTTTTACCGCGCGGAGCAG
GTTTACCAACAGCTTTCTTCTTGCCCAATCGACCTTTTCATGACATGTGA
TCAGGAGTTTGTTGCTTTACAAACAAACTGAACGAGCACTTTTCAGTATC
TGATGATAATGATAGCTGGACGTGCACTTCAAGTTCTTGGAGTATGTGTA
CGGGCGTAATCACTTTCTGGAGCTGCTGCTGGAGGACAAAAAACGTTGTG
AGCCTTGTGGGCATTAGAAGTCATGGCAAATACGTGTGCGTAATCAATCT
CATAAATTATTGTAAATGAGAATCAATTTGCATTTGGCGCCTGAACTCGT
GGCCAGGATTGTCATGTCTTGTGGTTCGTTGTCATCATGCGACACTTTGT
TGCGTCACCTGCCTGTCACCTGCCTGTGCTCACTGTATGGATTGCAGGAC
TGCACTTTTGGAACGAACAAATATGGGCTGGCGCTGAGCATCATCGTTGG
GGTCAATGGTGACAGCAAGTAAGTGTGTTCTTTCAAATTATTTGCATGCA
CCTATATGGACAAGATGTGATGTAATCTGTGCTTTGGTCATATTGTACAG
GGCTTTGTGTCATGCTGTGCAATTACAGGGGCTGCATCACCTATCATGTT
CATGTTCACCGGTGCTGATCAAGATACAATTCTTTGTGCTTGTCTGCGTG
TTTCCAGGACGCGAATGTTTTGCCAGGCGCTGCTGGAACGTGAGGACACG
GAGGCGTTTTCGTGGTTCTTTGTCCACTATGTGAAGATGGTCGGCGGCCA
CTATCCGTCCGTATGTTTCACAGACAGGTACGCCAATTTCAGGTGATACT
GAAATTTAGTAGAGTGGGACGAGCACCTCTGCTGCTTCAGCAATTACCCT
CTCTATACTGTGCCCAGCAATGATGTTGCGATAACTGTGTCATTGCTGGA
TTTTGTGTTCGGTTGCAGAGATGCGGCAGCGGAGGCAGCCATGACCTTGG
CTTGGCCTGGCACTGTCCATCTTATCTGCGAATGGCACTTCTTCAAGAAC
ATCAAGGAGATGCTGAAGGGGAAGCTGGGGGATGCTTGGCAGGCAAGTCA
GCATTCGTTCAAGTCCATGTCTGTTATTGGCAAGGTTATCAAGTCGAGCC
ATAGGTGTGAAAGCTCAAGCATGTGAACGGAATCAACAGTGTAAGTATGC
TGGATACAAACTTTACCAAGAAGCTAGGCACATCGCAGCACAGGAGGTGC
GCAGATGTCTTGTGTCATATGTTGCCCTGTCTGACTAGGTCCACCTCGAT
TATTGTGCGTGTAGGTTGTGCCTGCACATTGATGTGGGTCGCTTGCACGC
CATGTGTACAGTCGCTCAATCAAATACCATGTGCGTCTGCGGTGGAGGTT
TCAATGTGCAATGCAGAGCGAGTAGGTGTTATCATTATGTACAGAAGATG
ATCTCTGTGCCAAACGTATCGACACTGCGCTTGTAGGTTTCTCAAGGTAC
GGTTTTGAGGCCTCTGCCAAGCATGATTAGCAAAGCAGCACAGCCATACC
ACAAAGCACGCGTCCATGAAGAAGTGTCCTGCAGAAGATGTGATGCAGTC
CACTAGCATGGTCTGTGCGGACAAAGCAGTAGCGCCTTTCTGTAGCAGTT
GTGAAGAAGCTGGCATGTGTCAGCCAAGCTGCTTGTGCACCTTTGCATTG
CCAATGTGTATGTACGTAGTAGTAAAGTCTTCAAGCTCGCAGGACTGACG
AAGAAAGCTATGCTCATGCACACATGCTCACAGTTATGACGGAGCTGGAA
TAAGAGCGGCGTGGTGGGCTTGTGTGCTATCGTCCACCTTGCAATGTCAC
AAAAGCTTTCAGTGTGGGCTGCGGCGCTTGCACACAGGCATACATCACAC
CATTTGCAGCTTTCATCAAGCAAACAAGGCGGGACAGCACATAGTGCATG
CACGCATAAAATGCCAGGTTGACTTGTGCATGCTGCATGCAGTAAGTAGT
ATGCTGAAAATGCGGTGTCACCAAACCAACAACAATAGTTACCTGCAGGC
CTCGCTCAGCCCAAACGCAAGCTTGCAGTGCAAATGAATTCAAGGCACTT
GTGCTATAGGGAAGATCACTCTGTCAGTCTGAGTTTATTGAAGTTGAGTA
CTATTATGGTATTGGCCTGTCTCATCCGCTTCGGTCAATCACTCGTTGGT
CGAATCTAGTTCAACTGCAATTGTGAATGTTCTGCAGTGATATTGGAGTT
GAGGTAACTTGAGATTAACAAAGAAATGGCGCAAGTAAAGTAAGATATCA
CACAAGCAACCCGTTAGGCGCAAATATGGGGTGCAATCACACAAAAATGC
ATATTTGGGATTACTCAACCACCCAGATATAATAATACATACATGCCATA
CATGCTTGAAGACATACTACAGGATTGATATCAACTTCAACGTTGCAGTA
GTCAGCAGGTGACAACGGGCGACATGTGACATTACCTAGCTTCAATGATA
CTTGGCATTAGGGACCGTACATAAAGCAATGGTCTAGGTCGCATTTGCGC
TTTCAGGGTGCGCAATTGGTCTGACTGAGGCCTCTTCCTTGATGTTCGCA
GATGTTCAGGAGCCTTATGCAGCGCGCATCGCGTGCTCCTACGGAAGCCA
GTTTTCAGGGGGCGCGGAAGGGACTGTTGGACGCCCTAGTGGATGCTGGC
GCCAGCGATGACGATGTCATGAAGTACCTCAACGACACGATCTACCCCAT
CCGGGAGCGCTGGGCATTCTGCTATCGCCTTGGCGTCCTCACCCTCGGCA
TCAACTCTACTCAACGTTGCGAGGGGTACTTTGGCATCCTGAAAGCGGAA
CTGTTGAAGGTCACCACGCTCTGCCACCTGAAGCAAACGCTTGAAAATAT
CACTGCCAGGTAAGAAACCGGCTCCTACAAGCGGATAATCATCTGCCTTC
CTCAGGGTGTTGCTGCACGCGTTGGTCATGGCCAGATATCACAGTGCACT
GTGCTCAGTGACTACAGTTTAAAATGTTTGTATACGCGATGCTCTTTTGT
GGATCAGGCCGATGCTAGTGAAATCCAAAATCTCATGACATGTCATATCT
GTTTCATTTGCATGTGTCCTTTGATTACCTGTACAGAAGTGGTTTGACTC
CGCTCACTTCGATGCCTTTGTCGCTCTAGGTACACCTCGGAAGATCATCT
GTACATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGGAGG
GCATGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTGGCG
CGGCAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGTGCG
GTCTGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGCTGA
CCGTGAACAGCGATGCTG

Coding sequence (CDS) from alignment at Contig_140:398924..403941+

>mRNA_15662 ID=mRNA_15662|Name=jgi.p|Trimin1|353013|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=720bp|location=Sequence derived from alignment at Contig_140:398924..403941+ (Tribonema minus UTEX_B_3156 )
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGACCAGGT
TGAGAGGGCGATGGAGTTTGGCTTGGATGTCATTCAACAGGCGCTGCTGG
AACGTGAGGACACGGAGGCGTTTTCGTGGTTCTTTGTCCACTATGTGAAG
ATGGTCGGCGGCCACTATCCGTCCATGTTCAGGAGCCTTATGCAGCGCGC
ATCGCGTGCTCCTACGGAAGCCAGTTTTCAGGGGGCGCGGAAGGGACTGT
TGGACGCCCTAGTGGATGCTGGCGCCAGCGATGACGATGTCATGAAGTAC
CTCAACGACACGATCTACCCCATCCGGGAGCGCTGGGCATTCTGCTATCG
CCTTGGCGTCCTCACCCTCGGCATCAACTCTACTCAACGTTGCGAGGGGT
ACTTTGGCATCCTGAAAGCGGAACTGTTGAAGGTCACCACGCTCTGCCAC
CTGAAGCAAACGCTTGAAAATATCACTGCCAGGTACACCTCGGAAGATCA
TCTGTACATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGG
AGGGCATGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTG
GCGCGGCAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGT
GCGGTCTGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGC
TGACCGTGAACAGCGATGCT