Trimin1|153699|gw1.140.73.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|153699
Unique NameTrimin1|153699|gw1.140.73.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length165
Homology
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835ZBY4_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY4_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.850e-93
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHGG 165
            MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHGG
Sbjct:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHGG 165          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835ZAQ1_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ1_9STRA)

HSP 1 Score: 206 bits (524), Expect = 9.430e-66
Identity = 111/143 (77.62%), Postives = 113/143 (79.02%), Query Frame = 0
Query:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMH 143
            MSQ GVP NLTTYNLA  ACRNSEAVQQADRILAS+AAAG                  RDWRRAIDVFRDMEANH  FVDAGMWNCLLEVLSA  A +STLDAAAQMAE GFAPTTTTYM L QAHATLGDGAAIESVLSSMH
Sbjct:    1 MSQAGVPANLTTYNLAFNACRNSEAVQQADRILASIAAAGVAPNRRTFARVLRACRYSRDWRRAIDVFRDMEANHPVFVDAGMWNCLLEVLSAYPAAESTLDAAAQMAESGFAPTTTTYMVLLQAHATLGDGAAIESVLSSMH 143          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835Z7V6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V6_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.090e-51
Identity = 97/164 (59.15%), Postives = 111/164 (67.68%), Query Frame = 0
Query:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHG 164
            MSQ G+P NL  YN+AL ACR+SEAVQQADRILASMAAA                   +DWRRA++VF DMEA H  F +  MW+ L++VL AC AP+STLDAAA MAE G  PTT TY  +  AHA LGDG AIESVLSSM AAG+EV   +L  L  GYAHG
Sbjct:    1 MSQTGLPPNLAAYNVALHACRSSEAVQQADRILASMAAASVAPNGRTFAGLLRACKMAKDWRRAVNVFFDMEAKHPEFANVYMWSRLVQVLYACAAPESTLDAAALMAELGVTPTTATYNMVLWAHARLGDGDAIESVLSSMRAAGEEVTFLSLAALTRGYAHG 164          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835Z2Y9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y9_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.560e-47
Identity = 115/165 (69.70%), Postives = 124/165 (75.15%), Query Frame = 0
Query:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHGG 165
            MSQ GVP   TTYNLAL+ACR+S AV QADRIL       XXXXXXXXXXXXXXX   +DWRRAIDVF  MEAN  AF D   WN LL VLSAC+AP+STL AAA MAERG AP   TYM + QA+A LGDGAAIESVLS M AAG+EV PKTL VLA GYA+ G
Sbjct:  211 MSQAGVPAISTTYNLALRACRDSAAVHQADRILXXXXXXXXXXXXXXXXXXXXXXRYAQDWRRAIDVFFAMEANLPAFADVYTWNRLLRVLSACSAPRSTLAAAALMAERGVAPIALTYMLILQAYAMLGDGAAIESVLSIMRAAGEEVTPKTLAVLANGYANSG 375          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835Z0W7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0W7_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.830e-46
Identity = 91/160 (56.88%), Postives = 108/160 (67.50%), Query Frame = 0
Query:    5 GVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHG 164
            G+P ++ ++NLAL A  +  A+Q ADRILASMAAAG                  RDW RAIDVF DMEANH  F DA MWN LL+V+ AC AP+STL+ AA MAE G  P T TY  + QA+A LGDG AIESVL SM AAG++V PKT+ VLA GYA+G
Sbjct:    1 GLPPDVKSHNLALYAWCSDGAMQNADRILASMAAAGVAPDRQTFEGVLQACWYARDWHRAIDVFFDMEANHPEFADAQMWNRLLKVVYACAAPESTLEVAALMAELGVVPITATYTFILQAYARLGDGDAIESVLLSMRAAGEQVTPKTMAVLANGYANG 160          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835Z7U6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.010e-46
Identity = 98/165 (59.39%), Postives = 115/165 (69.70%), Query Frame = 0
Query:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHGG 165
            MS+  +P ++TTY+LAL+ CR+S+AVQQADRILASMAAA                   +DWRRAI+VFRD+EANH AFVD  MWN LL+ L A   PQS L AAAQMAERG APT  T + L +AHATLGD AA+E VLSSM  AG+EV   +L VLA GYA GG
Sbjct:   36 MSRSCLPLDITTYSLALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGG 200          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835ZHN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN3_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.350e-36
Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 0
Query:   59 RDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHGG 165
            RDWRRA++VFRDMEANH  F D  MWN LL+VL  CT P++TL  AA MAERGFAPTT TYM L QAHA LGDGAA+ESVLSSMHAAG++V       LA GY +GG
Sbjct:  143 RDWRRALEVFRDMEANHPEFADVHMWNRLLQVLVVCTVPRTTLKVAADMAERGFAPTTATYMILLQAHAALGDGAAVESVLSSMHAAGEDVTFAARAALAKGYVYGG 249          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835Z0G4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.070e-35
Identity = 77/164 (46.95%), Postives = 99/164 (60.37%), Query Frame = 0
Query:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHG 164
            M+Q G P +LT YNLAL  C    AV  AD+ILA MAA G                  +DW RA+ VF  +EA++ A++D  +W CLL+ LS C  PQ+ L+AAA+MAERG   T   ++ + +AHA LGDGAA E+ LSSM AAG +V    L  +A GYAHG
Sbjct:  442 MAQSGTPPDLTAYNLALHTCSGGSAVLHADKILADMAAMGLAPNRHTFRGMLRACRMAQDWERALAVFGSVEAHYPAYMDTDLWICLLDALSVCRQPQAVLEAAARMAERGLPTTAAVHVVIAKAHAELGDGAAAETALSSMRAAGLKVTEVALFKVAEGYAHG 605          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835Z225_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z225_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.500e-30
Identity = 71/142 (50.00%), Postives = 85/142 (59.86%), Query Frame = 0
Query:    1 MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSM 142
            M Q G P +LT YNLAL  C  S AV  AD+ILA MAA G                  +D  RA+ VFR +EA++   VDA MW CLL+ LS C  PQ+ L AAA+MAERG  PT   Y+ + +AHA LGDGAA E+ LSSM
Sbjct:  163 MEQSGTPPDLTAYNLALHTCCGSSAVLHADKILADMAAMGLAPNRHTFRGMLRACKQAQDCERALAVFRSVEAHYPVDVDADMWICLLDALSVCRQPQAVLTAAARMAERGLLPTAAIYVVIAKAHAELGDGAAAETALSSM 304          
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Match: A0A835Z021_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z021_9STRA)

HSP 1 Score: 108 bits (271), Expect = 8.300e-27
Identity = 67/129 (51.94%), Postives = 75/129 (58.14%), Query Frame = 0
Query:   36 MAAAGXXXXXXXXXXXXXXXXXXRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQSTLDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVMPKTLVVLAIGYAHG 164
            MAAAG                  RDWRRAI VF DMEA H  F DA  WN LL+VL    AP STL AAA MA+RG  P T TY  +  AHA  GD AAI+ VL+SM AAG+EV   TL + A GY +G
Sbjct:    1 MAAAGIAPDGRTFAGVLQTCRHARDWRRAIYVFFDMEAKHPEFADAHTWNRLLQVLYVHPAPDSTLAAAALMAQRGVVPITATYNTVLWAHAMRGDSAAIKKVLTSMRAAGEEVTLTTLAMCAKGYGYG 129          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153699 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835ZBY4_9STRA1.850e-93100.00PPR_long domain-containing protein (Fragment) n=1 ... [more]
A0A835ZAQ1_9STRA9.430e-6677.62PPR_long domain-containing protein (Fragment) n=1 ... [more]
A0A835Z7V6_9STRA2.090e-5159.15Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z2Y9_9STRA3.560e-4769.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0W7_9STRA1.830e-4656.88Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z7U6_9STRA3.010e-4659.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHN3_9STRA1.350e-3668.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0G4_9STRA2.070e-3546.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z225_9STRA2.500e-3050.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z021_9STRA8.300e-2751.94Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..164
e-value: 1.0E-28
score: 102.6
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 1..90
e-value: 7.5E-7
score: 28.7
NoneNo IPR availablePANTHERPTHR47447OS03G0856100 PROTEINcoord: 1..149
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 8.944478

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_140contigContig_140:394304..394798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|153699mRNA_15660Tribonema minus UTEX_B_3156 mRNAContig_140 394304..394798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|153699|gw1.140.73.1 ID=Trimin1|153699|gw1.140.73.1|Name=jgi.p|Trimin1|153699|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp
MSQVGVPTNLTTYNLALKACRNSEAVQQADRILASMAAAGVAPNRRTFAG
VLRACRYSRDWRRAIDVFRDMEANHLAFVDAGMWNCLLEVLSACTAPQST
LDAAAQMAERGFAPTTTTYMALFQAHATLGDGAAIESVLSSMHAAGKEVM
PKTLVVLAIGYAHGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long
IPR002885Pentatricopeptide_repeat