Trimin1|347692|estExt_Genemark1.C_Ctg_140160 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347692
Unique NameTrimin1|347692|estExt_Genemark1.C_Ctg_140160
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length222
Homology
BLAST of jgi.p|Trimin1|347692 vs. uniprot
Match: A0A835ZAY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAY7_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 9.600e-160
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
Query:    1 MPVTATSSHQQPAVIMLQPFTRRHPLAKHSSWVTERQLLERFKGGDRGVDEVVMYQVVHSADDDQHQVEILEGLVTNMFAVGRDPNDDSEDSMAIWTAPYGILHGSMRALCIQACKRLGHRVIERAPVLRDVGTWTEMFLTGSGSMLRPVGVMHVPQNACDSDASLNMLPSGSATPMGQSPVDADQFIRSWEFEDTRVGAAIRAEMRRMLEDTAMPIEDLR 221
            MPVTATSSHQQPAVIMLQPFTRRHPLAKHSSWVTERQLLERFKGGDRGVDEVVMYQVVHSADDDQHQVEILEGLVTNMFAVGRDPNDDSEDSMAIWTAPYGILHGSMRALCIQACKRLGHRVIERAPVLRDVGTWTEMFLTGSGSMLRPVGVMHVPQNACDSDASLNMLPSGSATPMGQSPVDADQFIRSWEFEDTRVGAAIRAEMRRMLEDTAMPIEDLR
Sbjct:    1 MPVTATSSHQQPAVIMLQPFTRRHPLAKHSSWVTERQLLERFKGGDRGVDEVVMYQVVHSADDDQHQVEILEGLVTNMFAVGRDPNDDSEDSMAIWTAPYGILHGSMRALCIQACKRLGHRVIERAPVLRDVGTWTEMFLTGSGSMLRPVGVMHVPQNACDSDASLNMLPSGSATPMGQSPVDADQFIRSWEFEDTRVGAAIRAEMRRMLEDTAMPIEDLR 221          
BLAST of jgi.p|Trimin1|347692 vs. uniprot
Match: A0A7R9ZIP8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZIP8_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.210e-6
Identity = 51/173 (29.48%), Postives = 82/173 (47.40%), Query Frame = 0
Query:   22 RRHPLAKHSSWVTERQLLER-FKGGDRGVDEVVMYQVVHSADDDQHQVEILEGLVTNMFAVGRDPNDDSEDSMAIWTAPYGILHGSMRALCIQACKRLGHRVIERAPVLRDVGTWTEMFLTGSGSMLRPVGVMHVPQNACDSDASLNMLPSGSATPMGQSPVDADQFIRSWEF 193
            + HP AK SSW  ER+ LE  FK  D    EV++ + +    DD   +E+LEGL TN+F V +D    + DS         +L+G MR   ++    +   V +    L + G W E+F+T S  +   V  ++   +    D S+ ++P  S +  G    DA    + ++F
Sbjct:    7 QNHPTAKLSSWCWERRPLETMFK--DENTGEVILTRKLCGDGDDN--LELLEGLTTNVFVVYKDGRLKTADSQL-------VLNGYMRHEILRLADHIDMPVDQSPIRLSERGEWKEVFVTSSIRIATSVDTLNT-IHGNHHDGSVTVVPLWSQSSEGGD--DASFVSKIFDF 165          
BLAST of jgi.p|Trimin1|347692 vs. uniprot
Match: A0A7S3PWQ5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWQ5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 5.890e-6
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 0
Query:   25 PLAKHSSWVTERQLLE-RFKGGDRGVDEVVMY-----------QVVH---SADDDQHQVEILEGLVTNMFAVGRDPNDDSEDSMAIWTAPYGILHGSMRALCIQACKRLGHRVI----ERAPVLRDV--GTWTEMFLTGSGSMLRPVGVMHVPQ 157
            PLAK SSW + R+ LE +FK GD G  EV++            Q  H   S + D   +E+LEGL +N+F V +D +  +  +   +  P  +L+G  R L ++A +R G +V     E+A  ++D   G W E F T S  ++ P+G + +PQ
Sbjct:  279 PLAKLSSWCSIRRPLESQFKTGDTG--EVILTRKGKTQRSPSEQSDHDEMSIESDVANLELLEGLTSNLFVVYKDGSLRTASTNK-YDDPL-VLNGYARHLVLEAAERCGLKVEISTEEKAIKVQDGIDGLWAEAFFTSSIRLIIPIGKILLPQ 428          
BLAST of jgi.p|Trimin1|347692 vs. uniprot
Match: A0A1Z5K4M3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4M3_FISSO)

HSP 1 Score: 55.8 bits (133), Expect = 1.380e-5
Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 0
Query:   25 PLAKHSSWVTERQLLER---FKGGDRGVDEVVMYQVVHSADDDQHQVEILEGLVTNMFAVGRDPNDDSEDSMAIWTAPYGILHGSMRALCIQACKRLGHRVIE-RAPVLRDV--GTWTEMFLTGSGSMLRPV 150
            P  K +SW   R+ +ER   +K    GV EV+M   + SA D  HQ+E+LEGL +N+F V +D          + TA  G+L G  R L ++  +  G R+   ++ +L+D   G W E F+T S  ++ P+
Sbjct:  257 PRHKVASWTRLRKQMERPETYK--PPGVSEVLM---LRSARD--HQLEVLEGLSSNVFVVYKDGT--------LRTATDGVLFGYARHLVLECAESCGLRLDPFKSIILQDAEEGLWKEAFITSSSRLIYPI 373          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347692 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZAY7_9STRA9.600e-160100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9ZIP8_9STRA1.210e-629.48Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3PWQ5_9STRA5.890e-633.77Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5K4M3_FISSO1.380e-534.09Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001544Aminotransferase class IVPFAMPF01063Aminotran_4coord: 62..150
e-value: 5.4E-9
score: 36.2
IPR043132Branched-chain-amino-acid aminotransferase-like, C-terminalGENE3D3.20.10.10coord: 4..211
e-value: 1.1E-19
score: 72.5
NoneNo IPR availablePANTHERPTHR47703D-AMINOACID AMINOTRANSFERASE-LIKE PLP-DEPENDENT ENZYMES SUPERFAMILY PROTEINcoord: 10..159
IPR036038Aminotransferase-like, PLP-dependent enzymesSUPERFAMILY56752D-aminoacid aminotransferase-like PLP-dependent enzymescoord: 11..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:1472738..1474264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347692mRNA_3304Tribonema minus UTEX_B_3156 mRNAContig_14 1472662..1474265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347692|estExt_Genemark1.C_Ctg_140160 ID=Trimin1|347692|estExt_Genemark1.C_Ctg_140160|Name=jgi.p|Trimin1|347692|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=222bp
MPVTATSSHQQPAVIMLQPFTRRHPLAKHSSWVTERQLLERFKGGDRGVD
EVVMYQVVHSADDDQHQVEILEGLVTNMFAVGRDPNDDSEDSMAIWTAPY
GILHGSMRALCIQACKRLGHRVIERAPVLRDVGTWTEMFLTGSGSMLRPV
GVMHVPQNACDSDASLNMLPSGSATPMGQSPVDADQFIRSWEFEDTRVGA
AIRAEMRRMLEDTAMPIEDLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001544Aminotrans_IV
IPR043132BCAT-like_C
IPR036038Aminotransferase-like