mRNA_925 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|156793
Unique NamemRNA_925
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A835ZKS6_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKS6_9STRA)

HSP 1 Score: 202 bits (515), Expect = 6.100e-66
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 
Query:    1 PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE
Sbjct:    1 PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
[Close]
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A835YSX2_9STRA (Histone H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSX2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.830e-59
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 1 
Query:    1 PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            PPP RR +PGERALKEIRAY+R+TELLIRKRAFSRLVREVQG FTPRGVEYRW A AILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE
Sbjct:   28 PPPVRRRRPGERALKEIRAYERTTELLIRKRAFSRLVREVQGHFTPRGVEYRWAATAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 132
[Close]
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A836CIP5_9STRA (Histone H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 7.110e-46
Identity = 82/101 (81.19%), Postives = 87/101 (86.14%), Query Frame = 1 
Query:   13 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            RRHKPGE+ALKEIR YQRSTELLIRK  F+RLVREVQ  FTPRGV YRW ADA+LALQ AAEAHL+GL  DANLAAIH K VTI P+DMQLARRIRGR RE
Sbjct:   23 RRHKPGEKALKEIRTYQRSTELLIRKLPFARLVREVQEMFTPRGVLYRWAADALLALQHAAEAHLVGLFEDANLAAIHAKRVTIQPRDMQLARRIRGRMRE 123
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BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A836C8D2_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.900e-45
Identity = 81/104 (77.88%), Postives = 88/104 (84.62%), Query Frame = 1 
Query:    4 PPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            P  RRHKPGE+ALKEIRAYQRSTELLIRK  F+RLV+EVQ  FTP G++YRW A A+LALQEAAEAHL+GL  DANLA IH K VTI PKDMQLARRIRGR RE
Sbjct:   41 PRKRRHKPGEKALKEIRAYQRSTELLIRKLPFARLVKEVQTSFTPGGLQYRWAATAVLALQEAAEAHLVGLFEDANLACIHAKRVTIMPKDMQLARRIRGRLRE 144
[Close]
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A8K1FGE4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGE4_PYTOL)

HSP 1 Score: 130 bits (327), Expect = 1.320e-36
Identity = 71/101 (70.30%), Postives = 83/101 (82.18%), Query Frame = 1 
Query:    7 PARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRH 309
            P RR++PG  AL+EIR YQRSTELL+RK  F+RLVRE+Q +FTPR  EYRW A+A+LALQEAAEAHL+ L  DANL AIH K VT+  KD+QLARRIRGRH
Sbjct:   56 PKRRYRPGTVALREIRFYQRSTELLLRKLPFARLVREIQMEFTPR--EYRWQAEALLALQEAAEAHLVRLFEDANLCAIHAKRVTLMVKDIQLARRIRGRH 154
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BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: D7FXM0_ECTSI (Histone domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM0_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.810e-36
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 1 
Query:   13 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            RR +PGERALKEIRAYQR+TELL+RK  F+RLV+EVQ   TP G  YRW A A+LALQEAAEAHL+ L  DANL A+H K VTI  +D QLARRIRG+ RE
Sbjct:   44 RRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
[Close]
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A7S2WPV9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WPV9_9STRA)

HSP 1 Score: 127 bits (319), Expect = 9.460e-36
Identity = 70/101 (69.31%), Postives = 79/101 (78.22%), Query Frame = 1 
Query:   13 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            RR +PGE+ALKEIRAYQ ST+LL+R+  FSRLVRE+Q   +   VEYRW   A+LALQEAAEAHL+ L  D NL AIH K VTI PKDMQLARRIRG HRE
Sbjct:   31 RRRRPGEKALKEIRAYQNSTDLLLRRLPFSRLVREIQMSMS--NVEYRWQGTALLALQEAAEAHLVALFEDCNLCAIHAKRVTIMPKDMQLARRIRGFHRE 129
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BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A7S3M2P3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2P3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.310e-35
Identity = 71/101 (70.30%), Postives = 78/101 (77.23%), Query Frame = 1 
Query:   13 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            +R++PGERALKEIR YQRST+LLIR+  F+RLVREVQ        EYRW ADAILALQEAAEAHL  L  DANL AIH K VT+ PKD QLARRIRG  RE
Sbjct:   40 KRYRPGERALKEIRYYQRSTDLLIRRLPFARLVREVQVSIVSNKKEYRWQADAILALQEAAEAHLSSLFEDANLCAIHGKRVTVMPKDFQLARRIRGPMRE 140
[Close]
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A7S2BDC5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDC5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.370e-35
Identity = 70/101 (69.31%), Postives = 79/101 (78.22%), Query Frame = 1 
Query:   13 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            RRH+PGERALKEIR YQRST+LLIRK  F+RLVREV   FT +  EYRW A A+LALQE+AEAHL+ L  DANL  IH K VT+  KD+QLARRIRG  RE
Sbjct:    1 RRHRPGERALKEIRTYQRSTDLLIRKLPFARLVREVMLQFTNK--EYRWQASALLALQESAEAHLVHLFEDANLCTIHSKRVTVMVKDIQLARRIRGPMRE 99
[Close]
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: K8YX25_NANGC (Histone H3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX25_NANGC)

HSP 1 Score: 124 bits (311), Expect = 1.600e-34
Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = 1 
Query:    4 PPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 315
            P  RR +PG RAL+EIR YQR+TELL+R+  F+RLVREVQG+ + +  +YRW A+++LALQEAAEAHL+ L  DANL AIH K VTI PKDMQLARRIRG  RE
Sbjct:   29 PKKRRARPGMRALREIRQYQRTTELLLRRLPFARLVREVQGEISTK--QYRWQANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKDMQLARRIRGPLRE 130
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZKS6_9STRA6.100e-66100.00Histone-fold-containing protein n=1 Tax=Tribonema ... [more]
A0A835YSX2_9STRA1.830e-5992.38Histone H3 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A836CIP5_9STRA7.110e-4681.19Histone H3 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A836C8D2_9STRA3.900e-4577.88Histone-fold-containing protein n=1 Tax=Tribonema ... [more]
A0A8K1FGE4_PYTOL1.320e-3670.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D7FXM0_ECTSI1.810e-3669.31Histone domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2WPV9_9STRA9.460e-3669.31Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S3M2P3_9STRA1.310e-3570.30Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2BDC5_9STRA6.370e-3569.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K8YX25_NANGC1.600e-3466.35Histone H3 n=1 Tax=Nannochloropsis gaditana (strai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:65577..66044 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|156793|e_gw1.1.370.1
BRITEko00000,ko00001,ko03036,ko04147
KEGG Pathwayko05034,ko05202,ko05322,map05034,map05202,map05322
KEGG koko:K11253,ko:K11495
GOsGO:0000003,GO:0000041,GO:0000070,GO:0000132,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000785,GO:0000786,GO:0000788,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000819,GO:0000910,GO:0000939,GO:0000941,GO:0001817,GO:0001818,GO:0001889,GO:0001932,GO:0001934,GO:0002526,GO:0002577,GO:0002578,GO:0002583,GO:0002584,GO:0002589,GO:0002590,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0002697,GO:0002698,GO:0002700,GO:0002701,GO:0002703,GO:0002704,GO:0002706,GO:0002707,GO:0002709,GO:0002710,GO:0002718,GO:0002719,GO:0002724,GO:0002725,GO:0002791,GO:0002793,GO:0002819,GO:0002820,GO:0002822,GO:0002823,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003774,GO:0003777,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005727,GO:0005729,GO:0005737,GO:0005768,GO:0005769,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005938,GO:0006276,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006355,GO:0006357,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006952,GO:0006953,GO:0006954,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0007088,GO:0007154,GO:0007162,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007275,GO:0007346,GO:0007565,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009267,GO:0009566,GO:0009567,GO:0009605,GO:0009719,GO:0009790,GO:0009792,GO:0009889,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009897,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010106,GO:0010468,GO:0010469,GO:0010556,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010817,GO:0010862,GO:0010948,GO:0010959,GO:0012505,GO:0015031,GO:0015629,GO:0015630,GO:0015682,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019220,GO:0019222,GO:0019237,GO:0019725,GO:0019953,GO:0022402,GO:0022407,GO:0022408,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030003,GO:0030010,GO:0030100,GO:0030155,GO:0030162,GO:0030509,GO:0030541,GO:0030543,GO:0030863,GO:0030864,GO:0030881,GO:0031055,GO:0031099,GO:0031100,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031329,GO:0031330,GO:0031399,GO:0031401,GO:0031410,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0031618,GO:0031667,GO:0031668,GO:0031669,GO:0031935,GO:0031937,GO:0031974,GO:0031981,GO:0031982,GO:0032091,GO:0032092,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032886,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0033554,GO:0033572,GO:0034080,GO:0034220,GO:0034502,GO:0034506,GO:0034508,GO:0034613,GO:0034622,GO:0034724,GO:0034728,GO:0034755,GO:0034756,GO:0039706,GO:0040001,GO:0042176,GO:0042177,GO:0042221,GO:0042325,GO:0042327,GO:0042445,GO:0042446,GO:0042592,GO:0042594,GO:0042886,GO:0043044,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043235,GO:0043269,GO:0043393,GO:0043486,GO:0043505,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044454,GO:0044459,GO:0044464,GO:0044703,GO:0044706,GO:0044815,GO:0044877,GO:0045132,GO:0045177,GO:0045178,GO:0045184,GO:0045786,GO:0045807,GO:0045839,GO:0045861,GO:0045930,GO:0045937,GO:0046602,GO:0046603,GO:0046605,GO:0046606,GO:0046634,GO:0046636,GO:0046821,GO:0046883,GO:0046887,GO:0046916,GO:0048259,GO:0048260,GO:0048285,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0048871,GO:0048878,GO:0050000,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050801,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051098,GO:0051099,GO:0051100,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051276,GO:0051293,GO:0051294,GO:0051301,GO:0051303,GO:0051304,GO:0051307,GO:0051310,GO:0051321,GO:0051382,GO:0051383,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0055037,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060255,GO:0060341,GO:0060393,GO:0060586,GO:0060627,GO:0060968,GO:0061008,GO:0061136,GO:0061638,GO:0061640,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070199,GO:0070507,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0071103,GO:0071241,GO:0071248,GO:0071281,GO:0071310,GO:0071363,GO:0071459,GO:0071495,GO:0071496,GO:0071702,GO:0071705,GO:0071772,GO:0071773,GO:0071824,GO:0071840,GO:0071944,GO:0072512,GO:0072594,GO:0080090,GO:0090087,GO:0090092,GO:0090100,GO:0090276,GO:0090277,GO:0097159,GO:0097286,GO:0097421,GO:0097708,GO:0098552,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098687,GO:0098711,GO:0098739,GO:0098771,GO:0098796,GO:0098797,GO:0098802,GO:0098813,GO:0099568,GO:0099587,GO:0140013,GO:0140014,GO:1900120,GO:1900121,GO:1900122,GO:1900390,GO:1901363,GO:1901799,GO:1902275,GO:1902850,GO:1903037,GO:1903038,GO:1903046,GO:1903047,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903530,GO:1903532,GO:1903827,GO:1904282,GO:1904283,GO:1904432,GO:1904434,GO:1904435,GO:1904437,GO:1905269,GO:1990357,GO:1990459,GO:1990641,GO:1990712,GO:1990837,GO:2000008,GO:2000058,GO:2000059,GO:2000112,GO:2000272,GO:2000273,GO:2001141,GO:2001185,GO:2001186,GO:2001252
Preferred nameCENPA
Descriptionprotein heterodimerization activity
COG categoryB
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2036@1|root,KOG1745@2759|Eukaryota
Evalue2.97e-37
Seed ortholog2880.D7FXM0
Hectar predicted targeting categoryother localisation
TranscriptId157115
TrackFilteredModels1
ProteinId156793
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156793gene_925Tribonema minus UTEX_B_3156 geneContig_1 65577..66044 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_925_1exon_925_1Tribonema minus UTEX_B_3156 exonContig_1 65577..65684 +
exon_925_2exon_925_2Tribonema minus UTEX_B_3156 exonContig_1 65835..66044 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_925CDS_925Tribonema minus UTEX_B_3156 CDSContig_1 65577..65684 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156793Trimin1|156793|e_gw1.1.370.1Tribonema minus UTEX_B_3156 polypeptideContig_1 65577..66044 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_925 ID=mRNA_925|Name=jgi.p|Trimin1|156793|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=318bp|location=Sequence derived from alignment at Contig_1:65577..66044+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCTCCGCCCGCCAGGAGACATAAGCCGGGAGAGAGAGCCCTGAAGGAGAT
CAGAGCCTACCAGCGCAGCACGGAGCTGCTGATCAGGAAGCGGGCGTTCA
GCAGGCTGGTCCGGGAGGTCCAGGGGGATTTCACTCCGAGAGGCGTCGAG
TACCGCTGGACGGCGGACGCGATTCTCGCGCTGCAGGAAGCGGCGGAGGC
GCACCTGATCGGGCTCCTGGCGGACGCCAACCTGGCGGCCATACACCGCA
AGTGCGTGACCATCGGCCCCAAGGACATGCAGCTGGCGCGGCGGATCCGG
GGGAGGCACCGCGAGTAG
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protein sequence of jgi.p|Trimin1|156793

>Trimin1|156793|e_gw1.1.370.1 ID=Trimin1|156793|e_gw1.1.370.1|Name=jgi.p|Trimin1|156793|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=106bp
PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVE
YRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIR
GRHRE*
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mRNA from alignment at Contig_1:65577..66044+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_925 ID=mRNA_925|Name=jgi.p|Trimin1|156793|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=468bp|location=Sequence derived from alignment at Contig_1:65577..66044+ (Tribonema minus UTEX_B_3156 )
CCTCCGCCCGCCAGGAGACATAAGCCGGGAGAGAGAGCCCTGAAGGAGAT
CAGAGCCTACCAGCGCAGCACGGAGCTGCTGATCAGGAAGCGGGCGTTCA
GCAGGCTGGTGAGTCGTGAGCCGGCGGAGGCGTCGGCGGCGGCGTCGGCT
GAGGCGGCGGAGGCGACCGCCCTCTACCCCGCCTCGCCTCGCCTCGCATC
CTCTCTCCTCGCCTCTACGTTGACTCAGATCGGGACTCGGACTCTCTCCT
TTCCGCAGGTCCGGGAGGTCCAGGGGGATTTCACTCCGAGAGGCGTCGAG
TACCGCTGGACGGCGGACGCGATTCTCGCGCTGCAGGAAGCGGCGGAGGC
GCACCTGATCGGGCTCCTGGCGGACGCCAACCTGGCGGCCATACACCGCA
AGTGCGTGACCATCGGCCCCAAGGACATGCAGCTGGCGCGGCGGATCCGG
GGGAGGCACCGCGAGTAG
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Coding sequence (CDS) from alignment at Contig_1:65577..66044+

>mRNA_925 ID=mRNA_925|Name=jgi.p|Trimin1|156793|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=318bp|location=Sequence derived from alignment at Contig_1:65577..66044+ (Tribonema minus UTEX_B_3156 )
CCTCCGCCCGCCAGGAGACATAAGCCGGGAGAGAGAGCCCTGAAGGAGAT
CAGAGCCTACCAGCGCAGCACGGAGCTGCTGATCAGGAAGCGGGCGTTCA
GCAGGCTGGTCCGGGAGGTCCAGGGGGATTTCACTCCGAGAGGCGTCGAG
TACCGCTGGACGGCGGACGCGATTCTCGCGCTGCAGGAAGCGGCGGAGGC
GCACCTGATCGGGCTCCTGGCGGACGCCAACCTGGCGGCCATACACCGCA
AGTGCGTGACCATCGGCCCCAAGGACATGCAGCTGGCGCGGCGGATCCGG
GGGAGGCACCGCGAGTAG
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