Trimin1|156793|e_gw1.1.370.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156793
Unique NameTrimin1|156793|e_gw1.1.370.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length106
Homology
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A835ZKS6_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKS6_9STRA)

HSP 1 Score: 202 bits (515), Expect = 6.100e-66
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE
Sbjct:    1 PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A835YSX2_9STRA (Histone H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSX2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.830e-59
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 0
Query:    1 PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            PPP RR +PGERALKEIRAY+R+TELLIRKRAFSRLVREVQG FTPRGVEYRW A AILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE
Sbjct:   28 PPPVRRRRPGERALKEIRAYERTTELLIRKRAFSRLVREVQGHFTPRGVEYRWAATAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 132          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A836CIP5_9STRA (Histone H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 7.110e-46
Identity = 82/101 (81.19%), Postives = 87/101 (86.14%), Query Frame = 0
Query:    5 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            RRHKPGE+ALKEIR YQRSTELLIRK  F+RLVREVQ  FTPRGV YRW ADA+LALQ AAEAHL+GL  DANLAAIH K VTI P+DMQLARRIRGR RE
Sbjct:   23 RRHKPGEKALKEIRTYQRSTELLIRKLPFARLVREVQEMFTPRGVLYRWAADALLALQHAAEAHLVGLFEDANLAAIHAKRVTIQPRDMQLARRIRGRMRE 123          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A836C8D2_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.900e-45
Identity = 81/104 (77.88%), Postives = 88/104 (84.62%), Query Frame = 0
Query:    2 PPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            P  RRHKPGE+ALKEIRAYQRSTELLIRK  F+RLV+EVQ  FTP G++YRW A A+LALQEAAEAHL+GL  DANLA IH K VTI PKDMQLARRIRGR RE
Sbjct:   41 PRKRRHKPGEKALKEIRAYQRSTELLIRKLPFARLVKEVQTSFTPGGLQYRWAATAVLALQEAAEAHLVGLFEDANLACIHAKRVTIMPKDMQLARRIRGRLRE 144          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A8K1FGE4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGE4_PYTOL)

HSP 1 Score: 130 bits (327), Expect = 1.320e-36
Identity = 71/101 (70.30%), Postives = 83/101 (82.18%), Query Frame = 0
Query:    3 PARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRH 103
            P RR++PG  AL+EIR YQRSTELL+RK  F+RLVRE+Q +FTPR  EYRW A+A+LALQEAAEAHL+ L  DANL AIH K VT+  KD+QLARRIRGRH
Sbjct:   56 PKRRYRPGTVALREIRFYQRSTELLLRKLPFARLVREIQMEFTPR--EYRWQAEALLALQEAAEAHLVRLFEDANLCAIHAKRVTLMVKDIQLARRIRGRH 154          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: D7FXM0_ECTSI (Histone domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM0_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.810e-36
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 0
Query:    5 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            RR +PGERALKEIRAYQR+TELL+RK  F+RLV+EVQ   TP G  YRW A A+LALQEAAEAHL+ L  DANL A+H K VTI  +D QLARRIRG+ RE
Sbjct:   44 RRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A7S2WPV9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WPV9_9STRA)

HSP 1 Score: 127 bits (319), Expect = 9.460e-36
Identity = 70/101 (69.31%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    5 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            RR +PGE+ALKEIRAYQ ST+LL+R+  FSRLVRE+Q   +   VEYRW   A+LALQEAAEAHL+ L  D NL AIH K VTI PKDMQLARRIRG HRE
Sbjct:   31 RRRRPGEKALKEIRAYQNSTDLLLRRLPFSRLVREIQMSMS--NVEYRWQGTALLALQEAAEAHLVALFEDCNLCAIHAKRVTIMPKDMQLARRIRGFHRE 129          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A7S3M2P3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2P3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.310e-35
Identity = 71/101 (70.30%), Postives = 78/101 (77.23%), Query Frame = 0
Query:    5 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            +R++PGERALKEIR YQRST+LLIR+  F+RLVREVQ        EYRW ADAILALQEAAEAHL  L  DANL AIH K VT+ PKD QLARRIRG  RE
Sbjct:   40 KRYRPGERALKEIRYYQRSTDLLIRRLPFARLVREVQVSIVSNKKEYRWQADAILALQEAAEAHLSSLFEDANLCAIHGKRVTVMPKDFQLARRIRGPMRE 140          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: A0A7S2BDC5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDC5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.370e-35
Identity = 70/101 (69.31%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    5 RRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            RRH+PGERALKEIR YQRST+LLIRK  F+RLVREV   FT +  EYRW A A+LALQE+AEAHL+ L  DANL  IH K VT+  KD+QLARRIRG  RE
Sbjct:    1 RRHRPGERALKEIRTYQRSTDLLIRKLPFARLVREVMLQFTNK--EYRWQASALLALQESAEAHLVHLFEDANLCTIHSKRVTVMVKDIQLARRIRGPMRE 99          
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Match: K8YX25_NANGC (Histone H3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX25_NANGC)

HSP 1 Score: 124 bits (311), Expect = 1.600e-34
Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = 0
Query:    2 PPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVEYRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIRGRHRE 105
            P  RR +PG RAL+EIR YQR+TELL+R+  F+RLVREVQG+ + +  +YRW A+++LALQEAAEAHL+ L  DANL AIH K VTI PKDMQLARRIRG  RE
Sbjct:   29 PKKRRARPGMRALREIRQYQRTTELLLRRLPFARLVREVQGEISTK--QYRWQANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKDMQLARRIRGPLRE 130          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156793 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZKS6_9STRA6.100e-66100.00Histone-fold-containing protein n=1 Tax=Tribonema ... [more]
A0A835YSX2_9STRA1.830e-5992.38Histone H3 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A836CIP5_9STRA7.110e-4681.19Histone H3 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A836C8D2_9STRA3.900e-4577.88Histone-fold-containing protein n=1 Tax=Tribonema ... [more]
A0A8K1FGE4_PYTOL1.320e-3670.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D7FXM0_ECTSI1.810e-3669.31Histone domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2WPV9_9STRA9.460e-3669.31Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S3M2P3_9STRA1.310e-3570.30Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2BDC5_9STRA6.370e-3569.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K8YX25_NANGC1.600e-3466.35Histone H3 n=1 Tax=Nannochloropsis gaditana (strai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 23..40
score: 75.36
coord: 82..103
score: 70.16
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 4..104
e-value: 1.1E-47
score: 174.4
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 5..104
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 5..100
e-value: 6.4E-33
score: 113.9
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..103
e-value: 2.6E-43
score: 149.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..102
NoneNo IPR availablePANTHERPTHR11426:SF191HISTONE H3-LIKE CENTROMERIC PROTEIN Acoord: 5..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:65577..66044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156793mRNA_925Tribonema minus UTEX_B_3156 mRNAContig_1 65577..66044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156793|e_gw1.1.370.1 ID=Trimin1|156793|e_gw1.1.370.1|Name=jgi.p|Trimin1|156793|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=106bp
PPPARRHKPGERALKEIRAYQRSTELLIRKRAFSRLVREVQGDFTPRGVE
YRWTADAILALQEAAEAHLIGLLADANLAAIHRKCVTIGPKDMQLARRIR
GRHRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold