Trimin1|352893|estExt_Genemark1.C_Ctg_1350031 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|352893
Unique Name	Trimin1\|352893\|estExt_Genemark1.C_Ctg_1350031
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	397

Homology

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BLAST of jgi.p|Trimin1|352893 vs. uniprot
Match: A0A836CNL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL9_9STRA)

HSP 1 Score: 553 bits (1426), Expect = 3.040e-195
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0

Query:    1 MGGHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAELLLREQRKRHLGLSERTQQVLYESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAEVEEERRNSQPSSLGIQLDQESQDVLCLLQCTNSIGNGGSRAIVASVAAARSNTAPLKRAYSXXXXXXXXGLPXXXXXXXXXXXXXSAAPAAAPNRSRXXXXGSAPLPQKGGALQRSTTLPGGAQVGGFAALIARKGVAGVGARAGSFKRCNAMAAGRKTVVSGMQFVYMTGEDSLSNAGPLDDEPASFDSSKSSKSKTAYGGLKRAHSDGSGGPNSKKQQRSGPSLMGKLWNGLGAKTSALKATQTLHKDNRAVSK 396
            MGGHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAELLLREQRKRHLGLSERTQQVLYESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAEVEEERRNSQPSSLGIQLDQESQDVLCLLQCTNSIGNGGSRAIVASVAAARSNTAPLKRAYSXXXXXXXXGLPXXXXXXXXXXXXXSAAPAAAPNRSRXXXXGSAPLPQKGGALQRSTTLPGGAQVGGFAALIARKGVAGVGARAGSFKRCNAMAAGRKTVVSGMQFVYMTGEDSLSNAGPLDDEPASFDSSKSSKSKTAYGGLKRAHSDGSGGPNSKKQQRSGPSLMGKLWNGLGAKTSALKATQTLHKDNRAVSK
Sbjct:    1 MGGHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAELLLREQRKRHLGLSERTQQVLYESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAEVEEERRNSQPSSLGIQLDQESQDVLCLLQCTNSIGNGGSRAIVASVAAARSNTAPLKRAYSXXXXXXXXGLPXXXXXXXXXXXXXSAAPAAAPNRSRXXXXGSAPLPQKGGALQRSTTLPGGAQVGGFAALIARKGVAGVGARAGSFKRCNAMAAGRKTVVSGMQFVYMTGEDSLSNAGPLDDEPASFDSSKSSKSKTAYGGLKRAHSDGSGGPNSKKQQRSGPSLMGKLWNGLGAKTSALKATQTLHKDNRAVSK 396

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BLAST of jgi.p|Trimin1|352893 vs. uniprot
Match: D8LK00_ECTSI (DEK C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK00_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.440e-6
Identity = 89/174 (51.15%), Postives = 103/174 (59.20%), Query Frame = 0

Query:    3 GHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAELLL-REQRKRHLGLSERTQQVLYESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAEVEEERR--NSQPSSLGIQLDQESQDVLCLLQCTNS 173
            G G +ARG LRLD+LT AD+S+R EARRLGLLN DEEWS              XXXXXXX       L REQR RH+GLS+   + L  S    XXXXXXXXXXXXXXXXXXXXX                    V+AEVE+     +SQ   L +Q D++SQ +L LLQCTNS
Sbjct: 1493 GRGGNARGNLRLDELTRADKSTRGEARRLGLLNSDEEWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAREQRARHMGLSQSAVECLASSESEGXXXXXXXXXXXXXXXXXXXXXRREEARVQKLWVKRAKRRR-VLAEVEQSAAGGDSQGPELLMQEDEDSQAILSLLQCTNS 1665

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BLAST of jgi.p|Trimin1|352893 vs. uniprot
Match: A0A6H5KTL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL5_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 4.290e-6
Identity = 89/174 (51.15%), Postives = 104/174 (59.77%), Query Frame = 0

Query:    3 GHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAEL-LLREQRKRHLGLSERTQQVLYESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAEVEEERR--NSQPSSLGIQLDQESQDVLCLLQCTNS 173
            G G +ARG LRLD+LT AD+S+R EA RLGLLN DEEWS              XXXXXXX       L+REQR RH+GLS+   + L ES   XXXXXXXXXXXXXXXXXXXXXX                    V+AEVE+     +SQ     +Q D++SQ +L LLQCTNS
Sbjct: 1559 GRGGNARGNLRLDELTRADKSTRGEAARLGLLNSDEEWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVREQRARHMGLSQTAVECL-ESSESXXXXXXXXXXXXXXXXXXXXXXDRREEARVQKLWVKRAKRRRVLAEVEQSAAGGDSQGPEFLMQEDEDSQAILSLLQCTNS 1731

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352893 vs. uniprot

BLAST of jgi.p|Trimin1|352893 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CNL9_9STRA	3.040e-195	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LK00_ECTSI	2.440e-6	51.15	DEK C-terminal domain-containing protein n=1 Tax=E...	[more]
A0A6H5KTL5_9PHAE	4.290e-6	51.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..258

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_135	contig	Contig_135:296312..297908 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352893	mRNA_14971	Tribonema minus UTEX_B_3156	mRNA	Contig_135 296113..297908 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|352893|estExt_Genemark1.C_Ctg_1350031 ID=Trimin1|352893|estExt_Genemark1.C_Ctg_1350031|Name=jgi.p|Trimin1|352893|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=397bp
MGGHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGG
QEEADELDEMDEQQLAELLLREQRKRHLGLSERTQQVLYESSDDDSAGGG
GGGGAGGGEGGEEKDEEALAEERMLRQWRRRAKMRRVMAEVEEERRNSQP
SSLGIQLDQESQDVLCLLQCTNSIGNGGSRAIVASVAAARSNTAPLKRAY
SSSSGGGGGGLPPLKRAYSSSSGAGSAAPAAAPNRSRSGSGGSAPLPQKG
GALQRSTTLPGGAQVGGFAALIARKGVAGVGARAGSFKRCNAMAAGRKTV
VSGMQFVYMTGEDSLSNAGPLDDEPASFDSSKSSKSKTAYGGLKRAHSDG
SGGPNSKKQQRSGPSLMGKLWNGLGAKTSALKATQTLHKDNRAVSK*