Trimin1|154361|gw1.133.84.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|154361
Unique Name	Trimin1\|154361\|gw1.133.84.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	133

Homology

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BLAST of jgi.p|Trimin1|154361 vs. uniprot
Match: A0A835ZDD8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD8_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.010e-95
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query:    1 DGAAPAQQLLFRGTKIVGDPHVPAGRCSFLVDLARDYDVDAEIAAASTGLVVVFGPNGAQVLDLGLRAPAVARWCKGRGQVNMRSDRWAPTWVDVDCLLYRTGAGAGGAAEYAYSIIWREPTHGIRILVDFRR 133
            DGAAPAQQLLFRGTKIVGDPHVPAGRCSFLVDLARDYDVDAEIAAASTGLVVVFGPNGAQVLDLGLRAPAVARWCKGRGQVNMRSDRWAPTWVDVDCLLYRTGAGAGGAAEYAYSIIWREPTHGIRILVDFRR
Sbjct:    1 DGAAPAQQLLFRGTKIVGDPHVPAGRCSFLVDLARDYDVDAEIAAASTGLVVVFGPNGAQVLDLGLRAPAVARWCKGRGQVNMRSDRWAPTWVDVDCLLYRTGAGAGGAAEYAYSIIWREPTHGIRILVDFRR 133

[Close]

BLAST of jgi.p|Trimin1|154361 vs. uniprot
Match: A0A835ZDM1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM1_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.520e-31
Identity = 70/134 (52.24%), Postives = 84/134 (62.69%), Query Frame = 0

Query:    9 LLFRGTKIVGDPHVPAGRC-------SFLVDLARDYDVDAEIAAASTGLVVVFGPNGAQVLDLGLRAPAVARWCKGRGQVNMRSDRWAPTW--VDVDCLLYRTGAGAGGAAEYAYSIIWREPTHGIRILVDFRR 133
            LL RG K+VG  +  +G         SF VDLAR YDV AE+AA S GLVV F   GA V+DL  RAP++ARWCKG+G VN  +   A     VDVDCL+Y      G  A + +SIIWREP HG+RI+VDF R
Sbjct:  254 LLMRGAKVVGSSNTNSGSTGSADRHWSFAVDLARGYDVAAEMAATS-GLVVAFVAGGAHVIDLHARAPSIARWCKGQGHVNGGAAAGAARGAVVDVDCLVY------GPRAAHGFSIIWREPKHGVRIIVDFAR 380

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|154361 vs. uniprot

BLAST of jgi.p|Trimin1|154361 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZDD8_9STRA	1.010e-95	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835ZDM1_9STRA	6.520e-31	52.24	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF12014	Cyclin_D1_bind	coord: 11..88 e-value: 3.6E-5 score: 24.2

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_133	contig	Contig_133:264849..265247 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|154361	mRNA_14045	Tribonema minus UTEX_B_3156	mRNA	Contig_133 264849..265247 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|154361|gw1.133.84.1 ID=Trimin1|154361|gw1.133.84.1|Name=jgi.p|Trimin1|154361|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp
DGAAPAQQLLFRGTKIVGDPHVPAGRCSFLVDLARDYDVDAEIAAASTGL
VVVFGPNGAQVLDLGLRAPAVARWCKGRGQVNMRSDRWAPTWVDVDCLLY
RTGAGAGGAAEYAYSIIWREPTHGIRILVDFRR