Trimin1|16489|CE16488_18 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|16489
Unique NameTrimin1|16489|CE16488_18
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length153
Homology
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.750e-105
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query:    1 AGTAALALPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDALVTLTAQCDEANYPAYASQMD 153
            AGTAALALPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDALVTLTAQCDEANYPAYASQMD
Sbjct:    1 AGTAALALPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDALVTLTAQCDEANYPAYASQMD 153          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.760e-42
Identity = 73/146 (50.00%), Postives = 100/146 (68.49%), Query Frame = 0
Query:   12 AAGTTE-YVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGS--ANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA-LVTLTAQCDEANYPAYASQMD 153
            AAG  + + DD   F F+VP GW + + EISGRRK+V++TS  +  ANAF+A TP RGDFT+LGSFGT DEVS+T++P   G+S  ML   +  + Y YDYI+ QEGRPEKH+K++W +      L T+TAQC+E++Y      +D
Sbjct:   75 AAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTID 220          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A6V1S113_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S113_HETAK)

HSP 1 Score: 141 bits (356), Expect = 2.580e-39
Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = 0
Query:    8 LPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDG--SANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGD---ALVTLTAQCDEANYPAYAS 150
            LPA+A    +  D K  + F+VP GW ++E  ISG R V I+ + G  +ANAF+A TP+RGD+TSLGSFG  D V  T++P G GI    L  +S+   Y+YDY + QEGRPEK LK++++VV  +    LVT TAQCD A+Y  Y +
Sbjct:   69 LPAVAEDLMKVTDTKGAYSFQVPPGWEKSEAAISGGRTVTIFAAPGRPAANAFVAATPLRGDYTSLGSFGNLDYVESTVVPKGPGIESRCLESRSQRGTYFYDYTVKQEGRPEKRLKTIFAVVPDEFSPVLVTFTAQCDVADYEEYGT 216          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A7R9ZSX9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSX9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.420e-30
Identity = 67/152 (44.08%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   17 EYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGSANA---FIAVTPVRGDFTSLGSFGTADEVSQT-LIPNGKGISGE-----MLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA------LVTLTAQCDEANYPAYASQMD 153
            +Y D   KF  +VPAGW  +E E++ RRK+ ++    S      F+A TPVR DFTSLGSFG+ D+V+QT ++P GK I GE     ML+ +SKNS Y++DY     G+PE H ++++S+ +G        LV+LTAQC EA+Y A+    D
Sbjct:   79 DYKDPDCKFSIKVPAGWDFSEQELADRRKIKLYLEPNSNRKTLFFMAFTPVRDDFTSLGSFGSVDQVAQTTILPKGK-IMGEENSSTMLSAESKNSAYFFDYKQKVSGQPETHFRTIFSLANGATGGAGAVLVSLTAQCPEADYDAFKPLFD 229          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A7S4EZ64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ64_CHRCT)

HSP 1 Score: 112 bits (281), Expect = 4.210e-28
Identity = 61/144 (42.36%), Postives = 89/144 (61.81%), Query Frame = 0
Query:   17 EYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWT--SDGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIP---NGK------GISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVS----GDALVTLTAQCDEANY 145
            EYVD ++   F VP+GW+  E+E+SG RK++  T  +D   N F+A TP+RGD+TSLGSFG  D V  T++P   NG       GI G+M+   +    Y +DY+I Q G+P + L++++SV +    G  L+TLTAQC +  Y
Sbjct:   64 EYVDQEYGVSFVVPSGWSPEESELSGGRKLLAATDPADTDFNLFVAFTPIRGDYTSLGSFGNIDFVGSTILPQCPNGACTLETDGIRGKMIAQSTGRGAYIFDYLIEQTGQPSRRLRTLFSVQTVEGRGQNLITLTAQCRQERY 207          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A7S2WCD2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCD2_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.950e-25
Identity = 61/156 (39.10%), Postives = 92/156 (58.97%), Query Frame = 0
Query:    1 AGTAALALPALAAGTT--EYVDDKFKFRFEVPAGWTQTETEISGR------RKVVIWTS--DGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQE-GRPEKHLKSVWSVVSGDALVTLTAQCDEANY 145
            A  AAL+ P +A G     Y D      F+VP+ WT++++ ++        RK+V++    D   NAFIA TPVRGD+T++ SFGT + V + ++P G GI   +L+ K     YY+DY I  +   P + LK+V+++V GD LVTLT+Q  +A Y
Sbjct:   49 ASLAALSCPPVAWGADVQSYTDKATGSEFQVPSSWTRSDSSLATDPGMGLDRKLVLFVDPDDQDTNAFIAFTPVRGDYTAISSFGTLETVGRFIVPQGPGIESALLSSKVGAGKYYFDYQIKPDPNEPMRRLKTVFALVPGDTLVTLTSQTTQARY 204          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A448ZBR8_9STRA (PsbP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBR8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.090e-25
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 0
Query:   10 ALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGSANA---FIAVTPVRGDFTSLGSFGTADEVSQ-TLIPNGK-----GISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSG------DALVTLTAQCDEANYPA 147
            A A     Y +   KF  ++P+ WT TE  +  RRK++++    S      FIA TP R DFTSLGSFG+ DEV Q T++P  +     GI  EML+  SK   Y++DY+ +   +P+ H ++++S+ +G      + LVT+TAQ  E++Y A
Sbjct:   62 AAATPLARYENSNCKFSIDLPSEWTMTEQSLPDRRKIILYIKPDSNQKTLFFIAFTPTRDDFTSLGSFGSVDEVGQATILPKAELAAKQGIESEMLSAVSKKQAYFFDYVQSVPSQPKTHFRTIFSLATGATGGAGNVLVTITAQTPESDYAA 214          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: B7FU11_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU11_PHATC)

HSP 1 Score: 104 bits (259), Expect = 7.520e-25
Identity = 65/173 (37.57%), Postives = 98/173 (56.65%), Query Frame = 0
Query:    1 AGTAALALPALAAGT-----TEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWT--SDGSANAFIAVTPVRGDFTSLGSFGTADEVS-QTLIPN----GKGISGEMLNVKSKNSMYYYDYIIAQEG-RPEKHLKSVWSVV------SGDALVTLTAQCDEANYPA-YASQMD 153
            A  AA+  P+ A        T ++D +  F  +VP+ W++TE ++S RR +V+WT  +D  A+ F+A TPVR DFTSLGSFG+ D+V+ QT++P     G  +   ML   S+   Y++DY  A    +P  H ++++++       +G  LVTLTAQC E  Y   Y S  D
Sbjct:   41 ASAAAVGFPSTAVAVSVPTLTPFLDSRHGFTVDVPSQWSRTEQQLSDRRTIVVWTDPADARASVFVAYTPVRDDFTSLGSFGSVDQVAAQTILPKAQIAGVDVEATMLAAVSQKQAYFFDYRQAVPNVQPPTHFRTIFTLQQGATGGAGAVLVTLTAQCPEELYATKYQSLFD 213          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A7S4JNE5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JNE5_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.010e-24
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    4 AALALPALA-----AGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGSAN-----AFIAVTPVRGDFTSLGSFGTADEVSQ-TLIPNGKGISGE-----MLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVV------SGDALVTLTAQCDEANY 145
            AA++LP LA     A    +VD +  F+  VP GW +TE  ++ RRK+ ++    S +      FIA TPVR DFT LGSFG+ D+V+Q T++P G  I+GE     M+N +SK + Y +DY+     +PE+H ++++++       +G  LVTLTAQ  E+ Y
Sbjct:   67 AAVSLPDLAIADSGAKLEPFVDKECGFQILVPVGWERTEQSLADRRKINLFVDPSSGDDDKTILFIAYTPVRDDFTQLGSFGSVDQVAQMTIMPKGN-IAGEETVSSMINAESKKNAYIFDYMSKVPKQPERHFRTIFTLAQGATGGAGSVLVTLTAQTPESRY 229          
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Match: A0A0M0J7U2_9EUKA (Psbp domain-containing protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7U2_9EUKA)

HSP 1 Score: 102 bits (253), Expect = 5.010e-24
Identity = 62/160 (38.75%), Postives = 89/160 (55.62%), Query Frame = 0
Query:    9 PALAAGT--TEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWT--SDGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIP-----------NGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA---LVTLTAQCDEANYPAYAS 150
            PA AA    T Y D+++   F +P G+     E++  R++V  T  +D + N FIA TP+R D+TSLGSFGT D +  TL+P           +G  I G ML   S    + YDY I Q+G P +HL+S+ ++ +  A   L+TLTAQC E  + A A+
Sbjct:   46 PAAAASALPTSYKDERYGVSFLLPEGYVMKPQELADGRRLVTATDPNDDTTNVFIAFTPIRPDYTSLGSFGTIDFIGSTLLPQCGSNGACAFASGDDIEGVMLEQASVKGSFVYDYTIQQQGGPMRHLRSLLAIKADGAASVLITLTAQCLEPKHAAVAA 205          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|16489 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835ZDA3_9STRA2.750e-105100.00PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
D7FSF3_ECTSI1.760e-4250.00PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6V1S113_HETAK2.580e-3947.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9ZSX9_9STRA6.420e-3044.08Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4EZ64_CHRCT4.210e-2842.36Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2WCD2_9STRA2.950e-2539.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448ZBR8_9STRA3.090e-2537.91PsbP domain-containing protein n=1 Tax=Pseudo-nitz... [more]
B7FU11_PHATC7.520e-2537.57Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4JNE5_9STRA5.010e-2439.02Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A0M0J7U2_9EUKA5.010e-2438.75Psbp domain-containing protein chloroplastic-like ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 14..151
e-value: 1.3E-15
score: 57.9
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 8..153
e-value: 2.8E-24
score: 87.9
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 5..152
NoneNo IPR availablePANTHERPTHR31407:SF17PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTICcoord: 5..152
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 17..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_130contigContig_130:36734..39266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|16489mRNA_14362Tribonema minus UTEX_B_3156 mRNAContig_130 36734..39266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|16489|CE16488_18 ID=Trimin1|16489|CE16488_18|Name=jgi.p|Trimin1|16489|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=153bp
AGTAALALPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWT
SDGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKS
KNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDALVTLTAQCDEANYPAYAS
QMD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand