Trimin1|347574|estExt_Genemark1.C_Ctg_130075 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347574
Unique NameTrimin1|347574|estExt_Genemark1.C_Ctg_130075
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length363
Homology
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BLAST of jgi.p|Trimin1|347574 vs. uniprot
Match: A0A835ZJW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW3_9STRA)

HSP 1 Score: 693 bits (1788), Expect = 1.700e-251
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0 
Query:    1 MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPPGVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESLFIAAGAWFETRMTMRLLLTEIGQAXXXXXXXXXXXXXXMLGLLEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAGPLSAVQLTGSAH 362
            MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPPGVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESLFIAAGAWFETRMTMRLLLTEIGQAXXXXXXXXXXXXXXMLGLLEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAGPLSAVQLTGSAH
Sbjct:    1 MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPPGVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESLFIAAGAWFETRMTMRLLLTEIGQAXXXXXXXXXXXXXXMLGLLEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAGPLSAVQLTGSAH 362
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BLAST of jgi.p|Trimin1|347574 vs. uniprot
Match: A0A835Z0J5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J5_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.960e-69
Identity = 109/189 (57.67%), Postives = 125/189 (66.14%), Query Frame = 0 
Query:  143 LEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPG 331
            LE+ +  +         + A+A RS LLLLL PLH+RRLG  FCC +AF LAWAAA +SL RLTD YNA+QA+GLY+RKR +KRRCP C GFGIEPCDLCGSTGFR++EMKFI TDPCP                                +CFSRRWQWC RCGGSG  A+PWT WA PRIIYTLFPG
Sbjct:  104 LESWVAALSNTAVYAATSVAAAGRSALLLLLTPLHSRRLGFAFCCAIAFALAWAAANLSLSRLTDTYNARQARGLYMRKRSLKRRCPCCIGFGIEPCDLCGSTGFRVHEMKFILTDPCP--------------------------------KCFSRRWQWCERCGGSGSLAKPWTGWALPRIIYTLFPG 260
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347574 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZJW3_9STRA1.700e-251100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0J5_9STRA1.960e-6957.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_13contigContig_13:816958..825378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347574mRNA_5821Tribonema minus UTEX_B_3156 mRNAContig_13 816751..825378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347574|estExt_Genemark1.C_Ctg_130075 ID=Trimin1|347574|estExt_Genemark1.C_Ctg_130075|Name=jgi.p|Trimin1|347574|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=363bp
MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPP
GVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESL
FIAAGAWFETRMTMRLLLTEIGQARMTMRLLLTDIGQAMLGLLEAGLNTM
RAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATI
SLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIY
EMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRW
QWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAG
PLSAVQLTGSAH*
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