mRNA_5821 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347574
Unique Name	mRNA_5821
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|347574 vs. uniprot
Match: A0A835ZJW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW3_9STRA)

HSP 1 Score: 692 bits (1786), Expect = 5.350e-250
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1

Query:    1 MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPPGVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESLFIAAGAWFETRMTMRLLLTEIGQAXXXXXXXXXXXXXXMLGLLEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAGPLSAVQLTGSAH 1086
            MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPPGVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESLFIAAGAWFETRMTMRLLLTEIGQAXXXXXXXXXXXXXXMLGLLEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAGPLSAVQLTGSAH
Sbjct:    1 MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPPGVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESLFIAAGAWFETRMTMRLLLTEIGQAXXXXXXXXXXXXXXMLGLLEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAGPLSAVQLTGSAH 362

[Close]

BLAST of jgi.p|Trimin1|347574 vs. uniprot
Match: A0A835Z0J5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J5_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.540e-68
Identity = 109/189 (57.67%), Postives = 125/189 (66.14%), Query Frame = 1

Query:  427 LEAGLNTMRAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATISLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIYEMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRWQWCGRCGGSGCTAEPWTAWAAPRIIYTLFPG 993
            LE+ +  +         + A+A RS LLLLL PLH+RRLG  FCC +AF LAWAAA +SL RLTD YNA+QA+GLY+RKR +KRRCP C GFGIEPCDLCGSTGFR++EMKFI TDPCP                                +CFSRRWQWC RCGGSG  A+PWT WA PRIIYTLFPG
Sbjct:  104 LESWVAALSNTAVYAATSVAAAGRSALLLLLTPLHSRRLGFAFCCAIAFALAWAAANLSLSRLTDTYNARQARGLYMRKRSLKRRCPCCIGFGIEPCDLCGSTGFRVHEMKFILTDPCP--------------------------------KCFSRRWQWCERCGGSGSLAKPWTGWALPRIIYTLFPG 260

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347574 vs. uniprot

BLAST of jgi.p|Trimin1|347574 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZJW3_9STRA	5.350e-250	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z0J5_9STRA	1.540e-68	57.67	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_13	contig	Contig_13:816751..825378 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347574\|estExt_Genemark1.C_Ctg_130075
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2CHPF@1\|root,2SBJ9@2759\|Eukaryota
Evalue	2.03e-10
Seed ortholog	130081.XP_005704455.1
Hectar predicted targeting category	signal peptide
TranscriptId	347896
Track	FilteredModels1
ProteinId	347574

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347574	gene_5821	Tribonema minus UTEX_B_3156	gene	Contig_13 816751..825378 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5821_12	exon_5821_12	Tribonema minus UTEX_B_3156	exon	Contig_13 816751..817054 -
exon_5821_11	exon_5821_11	Tribonema minus UTEX_B_3156	exon	Contig_13 817169..817375 -
exon_5821_10	exon_5821_10	Tribonema minus UTEX_B_3156	exon	Contig_13 817953..818098 -
exon_5821_9	exon_5821_9	Tribonema minus UTEX_B_3156	exon	Contig_13 819077..819179 -
exon_5821_8	exon_5821_8	Tribonema minus UTEX_B_3156	exon	Contig_13 820266..820349 -
exon_5821_7	exon_5821_7	Tribonema minus UTEX_B_3156	exon	Contig_13 820943..820983 -
exon_5821_6	exon_5821_6	Tribonema minus UTEX_B_3156	exon	Contig_13 821973..822014 -
exon_5821_5	exon_5821_5	Tribonema minus UTEX_B_3156	exon	Contig_13 822147..822251 -
exon_5821_4	exon_5821_4	Tribonema minus UTEX_B_3156	exon	Contig_13 822867..822960 -
exon_5821_3	exon_5821_3	Tribonema minus UTEX_B_3156	exon	Contig_13 823729..823785 -
exon_5821_2	exon_5821_2	Tribonema minus UTEX_B_3156	exon	Contig_13 824391..824433 -
exon_5821_1	exon_5821_1	Tribonema minus UTEX_B_3156	exon	Contig_13 825309..825378 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5821	UTR3_5821	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_13 816751..816957 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5821	CDS_5821	Tribonema minus UTEX_B_3156	CDS	Contig_13 825309..825378 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347574	Trimin1\|347574\|estExt_Genemark1.C_Ctg_130075	Tribonema minus UTEX_B_3156	polypeptide	Contig_13 816958..825378 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_13:816751..825378-
coding sequence from alignment at Contig_13:816751..825378-

spliced messenger RNA

>mRNA_5821 ID=mRNA_5821|Name=jgi.p|Trimin1|347574|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1296bp|location=Sequence derived from alignment at Contig_13:816751..825378- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCAAGCTGTAGCAGCGGTAACTTCGGCGCTGGCACTGGTGCAGCT
GGCGGAGACTTTCGACCCAGGCGATGCACGCGAGCTGCGGCAGCCGCAGC
GGCACTACGCACGGGCTATGAGCATGTCCATGGTGCTGGTGCCGCCGCCG
GGGGTCCTAGCTGCCGTGAGGGGGATACTAACGGGGGCGCTGCAGGCTGG
CAGGAACACGGTGGGCGCGGCGGCGCGCGCAATGTGGGCGGAGATGGAGG
GCTGGGCTGTAGCCGGGCTGGGACCGCTGGTGCTGTGGCTGGAGTCGCTG
TTCATAGCGGCGGGGGCGTGGTTTGAGACGCGCATGACCATGCGGCTGCT
GCTGACGGAGATCGGACAGGCGCGCATGACCATGCGGCTGCTGCTGACGG
ATATAGGACAGGCGATGCTGGGGCTGCTGGAAGCCGGTCTCAACACAATG
AGGGCTGAGGTCACACGGCTCGGCGTCGCCGCGGCGTCCGCCAGCAGATC
GCTGCTGCTGCTGCTGCTCGCGCCGCTGCACACGAGGCGGCTGGGGCTGC
TGTTCTGCTGCGGCGTGGCGTTCGTGCTAGCGTGGGCCGCCGCGACTATA
TCCCTCGGCCGCCTCACCGACATGTACAACGCCAAGCAGGCGAAGGGCCT
GTACCTGCGCAAGCGGCCCGTGAAGCGCCGCTGCCCCAACTGCGCGGGCT
TCGGCATCGAGCCGTGCGACCTCTGCGGCAGCACCGGCTTCCGCATCTAT
GAGATGAAGTTCATCTACACGGACCCCTGTCCAAACGAACCACCTGCCGC
ATCGGCGCACTTCTTCGACCCCCTCACCGCCCACGCCGCTGCGCCGGCGG
CGACGCACGTGCATCTGCCGCCGCGCCGCAGGTGCTTCTCGCGGCGCTGG
CAGTGGTGCGGCCGCTGCGGCGGCTCCGGCTGCACGGCCGAGCCGTGGAC
GGCGTGGGCAGCGCCGCGCATCATCTACACGCTGTTCCCGGGGCCAGCTG
CGGTGCCGCAGTCTGTTGCCTGGCTAGACGGCCGTGCACATGGCGCGGGG
CCGTTGAGTGCGGTCCAGCTCACCGGCTCCGCGCACTAGACCGCCATCGC
GCGTCGTCTGGCCCTTCACCAGCCGCCGCGTCGCTCACATGGCGGTAGGT
AGAGGTGACTGAGTGCGCGGCTGAACCAGCGTTGCGGCGCGTTGGGGGCG
CGCGCCGGGGGCCCTGTTGTCGCACGTCGCGCATGCCCCCCCGTTGAGCC
CTCTGCAACCAGAGGCGCCGGCGCACAGACTGCATGCCGCTTTGCA

protein sequence of jgi.p|Trimin1|347574

>Trimin1|347574|estExt_Genemark1.C_Ctg_130075 ID=Trimin1|347574|estExt_Genemark1.C_Ctg_130075|Name=jgi.p|Trimin1|347574|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=363bp
MKQAVAAVTSALALVQLAETFDPGDARELRQPQRHYARAMSMSMVLVPPP
GVLAAVRGILTGALQAGRNTVGAAARAMWAEMEGWAVAGLGPLVLWLESL
FIAAGAWFETRMTMRLLLTEIGQARMTMRLLLTDIGQAMLGLLEAGLNTM
RAEVTRLGVAAASASRSLLLLLLAPLHTRRLGLLFCCGVAFVLAWAAATI
SLGRLTDMYNAKQAKGLYLRKRPVKRRCPNCAGFGIEPCDLCGSTGFRIY
EMKFIYTDPCPNEPPAASAHFFDPLTAHAAAPAATHVHLPPRRRCFSRRW
QWCGRCGGSGCTAEPWTAWAAPRIIYTLFPGPAAVPQSVAWLDGRAHGAG
PLSAVQLTGSAH*

mRNA from alignment at Contig_13:816751..825378-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5821 ID=mRNA_5821|Name=jgi.p|Trimin1|347574|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8628bp|location=Sequence derived from alignment at Contig_13:816751..825378- (Tribonema minus UTEX_B_3156 )
ATGAAGCAAGCTGTAGCAGCGGTAACTTCGGCGCTGGCACTGGTGCAGCT
GGCGGAGACTTTCGACCCAGGTACTCAGCAGCAAATGACAAAAAGTATAA
AGCTACCTTTGCACGAATCAAGGCCCTCTGCTCTGCACATGAAATTCTGT
ATTATGGTGCTCATATTGTGTGTGTCACCGGGACTACAGCAGTGGCAGCA
GGAATCGCCAGTTTGCCCAGTCCTGCGCGCTTTGAGTTGCTTGTTCTTCG
TTCTCAAAACAGCATTGTGCGTGCATCCGTACCACCACACTTGACTCAGC
AATCATCGTCATCGGAGCCTTGATGACTTGCTGGACGATGGCGCAACTGG
TCAGAGTCTGCAGGACTGGCTCGTAATGGGACATTCATGTCCTGTCGCCA
CATACGCATGTGCAAATAGTGTTCCTTTCTCACAGCATGCACATGCCTGA
TAATATGTGTCCTGCAAAGGGCACGCCTGCATCGTGCTTGGTGACGCTTC
TCCTTTGCTCACAAGGAAGTGTGCATGACATGCGTGCATCTCTCAAGTGC
TGTCACAAGAGGCAGTATCGGCAGCATCTTCCCGCGCAGGCTGAGATCAT
ATGCGATTTTTCATTGCCCCACAATGAACATGTTCTACACGTAGTCACGT
CGAGTGGCTCGTATGATGATAAAGCAAAGTGACAGTTGTGTGGACTGCCA
TACTTACCAGCCCGGTGTGAGTGACACGCCACAATAGTCATCATTGCAAT
CGATTACTGCCACAGAGTGGGTTGCTTCAGAGTTAAGGTGAGGTGACCGT
GCTGAGCTCGTAGCTCGAACCTTGACCCTGCGCGTCCACTCAGCTTCCCC
CCCTCCCCCCCCCCCCCTTGCCGCGCGCACGCACGGCTGCCCGCATGGGG
GCATTGCATCAAGTGCTGGTGCTACCAGCTGCTGCGGCAGCGCAGGCGAT
GCACGCGAGCTGCGGCAGCCGCAGCGGCACTACGCACGGTGACGGTGCAT
CAAACTTTCAAGCTTGTGACTGAGCCGTCTACGTGCACATCCGCAACAGC
GCTCAGAACATTTTCAAAACCATTTTTTGAAATCGCTCTTTCTCTCTCTT
TCCGCACGCAGGCGTTCCGCTGCGTGCCAGCATCGGGTTTCGGGGCAGCT
CCGGCGCTGCGCGGCCATGGCGGCAGCAGCAGCGGCGCCTGCAACTGATG
CCGAGCGCTGCAGTGGCTCCCCGCCGCTGTCTCTGTAACAGGCGGCAAGT
GCGGTTGCAGCCTTGTGCAAGTGCCTTGATGGGTTCCGCTTCCAAACGGC
GGACACGCGGTCCTAGGCATGCGTGCAACACGACAGCATCATTAGAGTGC
CGCTAATTCATTGAGGCTGCTCCACACAATGAGAGCGCCATGCCTTCACA
TATGTACATGCCCACGATAAAATACAAAAATTGAAGTTACTTCTACTTGA
TATATCATTTTATTGTCAATCTACATGAGCCACAGTCATCTGGTTTGTTT
GTTGGATCGATCAGCACAACGCTCCCTTGCCACTCACTCAATCACATGCC
TCTCACCCCCCCCCTTCCCCCCGCCTTCCCTGCTGCCTGCCAGGGCTATG
AGCATGTCCATGGTGCTGGTGCCGCCGCCGGGGGTCCTAGCTGCCGTGAG
GTACGTCGTGCAAAGCTCCCACTACTTCGAGTTCCAGTGCTGCTCGACCT
TCACAATCTCGTGATGTGCAATATGACTGTGCCGTACCAGAGGCTGTGGC
TGCAGCCTGTGAAATGCGTAGGTGAATGAAATCGTGCTGGTACTTCCGCC
AGGAGCCGCCCTTCTGCAAGGCGCGCAATGGGTTATCGTTTAAGTCAGCT
GTACTGCCTGTTCCGCATCCACTTATCAACACTCAAAACAAAATTCAAGT
ACTGTAACGTAACAAGAAGGGCCATCGTCTTCATGTACTGTGACAAACAC
TGTGAAGTGTTGCCACCATTATCTTTGCTGCAAATGCATGAGGGGAGGGG
GGGGGGGGGAGGGGCACACGGTCATTGCTGCTGACACGCATGCAACCAGA
GTTCTTTAACAAGCTTGTTAGTAGCGTCAAGTGCGTCGCTGAGCCTGATA
CGTATACCTACGTGGAGAGCAGCATTTCCAGCTGTGTAGCTACCATACCG
CAACGGACACCATCGCGGTGTGTCAACTTCAAGATGTCTTTGTCAACTTC
AAGTCTGTTCGTGCGTGGAGTGCAGCAGTTTCAGCTGTGTAGCTACCATA
CCGCAAGCTACGCCATTCGCTGTGCGCCAGATACAAGTCTTGCGTAAGGA
GCAGCGCGTTCAGCTGTGTGGCTACCATACCGCGACCGCCGCCCCAAGCG
GTGTGTCAACATCAAGTCTTCACGTCTGTTTGTGTCAACTTCAAGTCCGT
TGTTTGCGCCCGCACCAGGGGGATACTAACGGGGGCGCTGCAGGCTGGCA
GGAACACGGTGGGCGCGGCGGCGCGCGCAATGTGGGCGGAGATGGAGGGC
TGGGCTGTAGCCGTGAGTACCTTGCAACAAAAGAAAAATCTGCACGATTC
TAGTTTTTTTAAATTGCAACACCGTGCGCTAAGAGCGGGTGTGGGCGGAG
ATGGAGGGCTGGACGGTAGCCGCGAGTACCCTGCAACACCCTTATTCAGC
ACGACTCAGCTTCACACTTGCGCTAAGAAGCGCTGAGAGCGGGTGGGCCG
AGCTGGAGGGCTGGGCTGTGTAGCCATGAGTACCCTCGCCTGTCAGACCT
TCGCCCGAAGCAAGCAACCCACTTCAAGAGCTCGCAGTGCGGGGCACGCG
TCCAAGGCGTCATGTGCTGTCCGTGATATGCATACCGTACTGGCCGGCGA
AGTCAGTGCTCAGAGTCAGAGCCGTCGCCAGACACGCTTGCTGCGCATTC
ACTTCCGGGAAGCGCGCCTGATGCGTCCAGACCTTAGTGTCGTCAAGCGC
GTCGAATGCAGCTGACTAAGGCTGCCGGTCCTGTGGTGGCTGAAGTCGTT
GCCCAACTTATCGAGGCAATCTTTCTCTCGCTCTCTGAGGCCGCCGGAGC
CGCTGGTGCTAGACTCACACTCACACACCTTCACTCACTCACTCACTCAC
TCACCCACTCTCCCTCACTCGCTGCAGGGGCTGGGACCGCTGGTGCTGTG
GCTGGAGTCGCTGTTCATAGCGGCGGGGGCGTGGTTTGAGACGCGCATGA
CCATGCGGCTGCTGCTGACGGAGATCGGACAGGTGCGTCACCTCACTTCA
ACTTCAATTTCTTACTTGAACTTGAGATGCAGTAGCAGGTTTGAAGAATC
GAGCAGAACAGAGCCCACACTCTGGTTATAAACTACACACCTTACCACCG
GGACGTGGTTTGAGGCGCGCATGACCATGCGGCTGCTGCTGACGGATATA
GGACAGGTGCGCCCCCTTACTTCAACTTCAACCCCTACTTGAAGTTCAAA
GCAGCAGAAGGTTGAACAACGGAGGAGAATAGATCACACACACTGCTGAA
ACTACACACCTTCCCACTGCTACGACATTCAACACCATGACCTCATGACA
TGACTTCTTTCCACTGCCTTTGGCTGCTGGCTATGCATCCATTTGATGCA
GGCTTGCATACAGAGAGCTCACACCGCTGCCAGTTCTTAGCACACCCTGC
CCAAATTGCGAGTCTGCACTACTGGAAGAACCGAGAAGATGGGTCAACAC
CATTCCCTGTGCTTGTCATTACTCACAAACGCCTCTAATGTCTAGCATGT
AGTGAAGTAACAAAGTGAAGTAATAAACAGCAACACACACACGGCGCCAG
GGCATCTAGTTGTAAAACGGCTGGGGTGTACGCTGGAGTAAAAGAGCATC
AGTTGAAGTATAAACTTCAGAATGCAGGCAGGCACTCTGCGGAGGCCCAG
TTTGACCTATAGTCCTGCGATTGATGCTGCCGTTAGCATGCCACGTGCAG
GCGATCAGGCAGGCGATCAGGTTCAACTGCTCGCTTCAGAAAATGGGTTC
AGGGGACATCAATGTTGACTTCATTTTTAAAATATCATGATACGATCTTG
ACACGTTTGTTAAGGCGACAGTAGTAGTCAAGTCCACTGCACTTGTCCAC
CGGCCCCACTGTCTTCACAAAAGCCAGCATCAGAGGGACAGCACGAGCGC
TCGCTCTTGACTCTTAGAACAGGCTTTCAGCAGGCTGGAGTGCGGAGCAC
ACTCGCGCAGAAACTATATTATTGCATGCAGGTAACAAAGAGGGCTATCG
CCCCTTGATGGAAAGTGTGTGTGGGGGGTGTTGAGCCTGTCGCTGAGCTG
TGCTGAAATTAGGCGGAGGAGACAACCCCCCCCATCGATTTCGACAGTGT
CCGCATCGCTGCCTCACCGACTGCGTTGTCTACCTCATGCTGCAGGCGAT
GCTGGGGCTGCTGGAAGCCGGTCTCAACACAATGAGGTAAGCTCTGCGCG
TTAAAATCAGGGATCAGAGCTGGGCCGAGCTCACGTTGCTGAGTCTGGAC
TCAGCGACATGTCAACGGATGTATCCGTGCATGCAGCCGCGCGCGACGGC
AGGACTGAGCATGCGCGGTGTATGTGCCTCTTGCACCTTTGCGCCGGCCT
ATCCTGATTTCGTTGTTGGAACAAATCCCGCGCCGCATGATCAGCGATAG
GGCGCTCGTTCATCACACACTCGCATGCCACAATCACGGTCTTCTGGTAC
TGCACATGCCGCAGCTGTGTGTGATCTCACACCGCGTGACCACGTGCTGG
AACACGAGTGCTTCAACCTGCCGCGGCACACAGGATCTGTGAGCCACCTC
TTCTTGTCGCCCCTTTCTCTTTTTGACCTCGATTTTGACAGCTCCTTTCC
CCAAGGTGTGATGCGCCTGTTGAACCATCCATCTTGGCGTCAGAGTTTCG
GCAGAGTTTCGGGTGGTCTAACCTTGACCCTAAGCTCTCCCGCTCTTGTT
GCTCGAGTTTTGAAGGCCTAACCCTGACCCCAAGCCGCCACGCTGTTACT
TTGCCACATGCATACCTACGTACCCACAGGGCTGAGGTCACACGGCTCGG
CGTCGCCGCGGCGTCCGCCAGCAGATCGCTGCTGCTGCTGCTGCTCGCGC
CGCTGCACACGAGGTGAGCCGCAGCAGCCGCGCTCATATACATACCCGCA
TACCGTACCCATACCAGCCCTGTCTCAATCCTGCGTCATCTGGTGCACGA
AGGTAGACGATGCGCACCGCAGCAGCGCTCATACCCACGCTATTATATGG
TGGCACTGTTTGGCTCTTGGCTAATTGCAGCAGCAGCGGCGACCACGGGT
ATCGGTGGAAGGCATTCAATTTGACGGCTGACCACACCTTGCCACCTAGA
GCCCTACGATCTTTTGATTCGTTTTCATATATACCCCCATACCATACCCA
TACCAGCCCTGTCTTAACCCTGCGTAATAGGGTGCATGAAGGCGGACGGT
CCGCGCCGCAGCAGCGCTCATACCCACGCTACTATACCCATACCCCAGTC
CTGATTCGCCCGTTGGTTTTGAAGGTCCGTGAAGAAGGGGGCTGCACACC
AGGAGAGCCGCCACAGCGCTGTCGTAACCATGCAGCTCCTGTGAGTGTCT
TGCTTCTGGACGGACGATCATGCTTGGTGCAGCAGTGGTGCTGCCTTGTA
ATACATGATTACGGGCAGCAGCGCTCTGCATGCAGCATCAAATTCCAGTG
GTTGCAGTGACTTCTCGGATGAACTTTGGCAGACTGTAACTGTTGCAAAG
TGGCAGTAACTGCAGTGACTTCTGGAATGAACTTTGGCGGACCGTAGCTA
TCAATAGTTCTGTTGCAGAAGGGCATACCAGCAGCTACAACAAGTTGCTA
CATAGCTGCCGGCAGGCACAGTGTTGCAGTCGTATTTATAGGCTAGCGCA
CCACCACAGGTCAGCGGGGCAGAAGCAGTGAAGACACCTGCAGCTAACAT
GGTACTGCAAGGATTGAAGTTCGGATCTAACACATAGCACGAATGGATGA
CCAGGATCGGTGGTGCTGTTTTGATGCAATGTGCCGTAAGGTTGGCATTC
CTGAACAAGTGGTGGAGAGAAAGGCACTGTTTTGGACCGAATAGCACGTC
AGTGCCCAGCAAGCTACACCTTGTGCGTCAGTACGCTCGCCACGCCCTGA
TCCGTTGCTGATGAGTCGTACGCCTTCAATGCCGTTTGCACGCGCGCAGG
CGGCTGGGGCTGCTGTTCTGCTGCGGCGTGGCGTTCGTGCTAGCGTGGGC
CGCCGCGACTATATCCCTCGGCCGCCTCACCGACATGTACAACGCCAAGC
AGGTGCGCATGCCGGAAAACTGCGAATGCATCGCATCTGCAGTGTGCAAT
GACGGTACGGAATGCGTACACACTTGGCATAGCACACGGCAGTATGTGCT
TTGATTTTACTTCCAAACGAAGCATGAGTATCCCAGCACAACATAAGCTG
GCCTACCGAACACGTGAGACCTGTCCATACTGAACACCCATGCCTCGAAC
GCTAAAAAGCTTGCACACACAAGTCTTTTGCCTACTGTGATTATGGTGGC
ACTGTTTGACTCGTGGTCAATGACTGCAGCAGCGTCGACCACGGTTATTG
GCGGAAGGCACTTGCGGCTAACCGTCCCTTGTCACCTAGAGCTCAACGAT
TTTTTTGATTCGTTTTTCATACGGTATGAGCCATCTGCAACGCCGAGCAG
GTGCATGGTTGGAGACCCCATGCCTTGTGCCCAAATAACCTTGCGGCATG
TACATGTAGTTTGGAAAAGTGCATACGTTTACGTATAGATGCAGACAAGT
GTATCACTCACTTGCGCATCAGCACATGTTATTGGTACGAACCACCATTT
CTCTTGGCTGCCTCATGGACACTATCAGTCATTGTCATGCTGCAGGCGAT
CTCTGCAAACGATCCAACGCAGTTGGGCATCAGCCCTGTCGCCAGCCCCG
TTGCTGACTGCTGTTCAGCGTACGCGCACATCAGTGCGCATGCATATGCC
GTGTTCATCTTTCACTTTGGCTCATGCACTTGGTGCAATTCGAAGCAACA
ACCGCGACACTTTACGTGCCACTGTGATCTTCGTCGCGCGACAGGCCAAG
GGCCTGTTGACATGTCGTCGCTTCCAAGTAAAAGCATCAACGGCCAAACT
CTGTGTACTTCCACACACCTTATGTCCTCACTTCCAAGTAGAAGCATAAA
CGGTCAACTTCTGTACGTCCACAAATTTCAAACAACTGCGACAAAACTTT
TGTGCCGCTGTGATCTTCGTCGCCCGACAGGCGAAGGGCCTGTACCTGCG
CAAGCGGCCCGTGAAGCGCCGCTGCCCCAACTGCGCGGGCTTCGGCATCG
AGCCGTGCGACCTCTGCGGCAGCACCGGCTTCCGCATCTATGAGATGAAG
TTCATCTACACGGACCCCTGTCCAAAGTGAGCGTGCAGCGATGCGCAACG
ACAAGTTGAAGTGCATGTTGTGCCACGATCGCTACTGGTACGTAGCCAGC
GCACCAATCAAGTAAAAGTGCAAGCTTTCATCCCCGAAGTTGACGCGCTC
GCGACTCGGCGGCGTGGCGTTGCGGCGCACAGTAGGCGCTGATCAGGAGT
CCTGCAGCCTGTCGTGCACTGGCTTCAATACGGACTGCCGCCAGCGTGCC
TCGCAGCGTTTGTATGCATGACAAGAGTAATCCCTGCATCGATCATTGCG
GCTCGACACCAAAACGGCGCACACGTATGAAACGTGGGATCGCGGTTTGC
CTTACCCCAACTGGGTGGCACCAACCGGCGACTTCACCCACTCAGCTCGG
GTGTTTCGCGCAGCCTCATCCGGAACCTGCTCCCCTCCCCCTGTACAGGG
CACCACCGCAGCGCACCACCGCAGCGCCGCGTATGGGTTGCAGCACAGCA
CCATAAGCGCCGCTCTACGCTGGCCATGCACTCTCGGCTGCATACTGTCA
CCGCCCACTTGTCACATGGGCACATCTTACCCACCTGTCACATCGTGGCA
CAGCGAACCACCTGCCGCATCGGCGCACTTCTTCGACCCCCTCACCGCCC
ACGCCGCTGCGCCGGCGGCGACGCACGTGCATCTGCCGCCGCGCCGCAGG
TGCTTCTCGCGGCGCTGGCAGTGGTGCGGCCGCTGCGGCGGCTCCGGCTG
CACGGCCGAGCCGTGGACGGCGTGGGCAGCGCCGCGCATCATCTACACGC
TGTTCCCGGGGTGACGCCACAGCCACTACACCTCTCGTGCACCCCCCATC
ATTGTTACCATTTTGGTGATAGGGTGGGGGTGGCCGCGGGTGCGCCGGGG
CCGCCGCCGCGGCTGTTCCGCGAGGCCAGCTGCGGTGCCGCAGTCTGTTG
CCTGGCTAGACGGCCGTGCACATGGCGCGGGGCCGTTGAGTGCGGTCCAG
CTCACCGGCTCCGCGCACTAGACCGCCATCGCGCGTCGTCTGGCCCTTCA
CCAGCCGCCGCGTCGCTCACATGGCGGTAGGTAGAGGTGACTGAGTGCGC
GGCTGAACCAGCGTTGCGGCGCGTTGGGGGCGCGCGCCGGGGGCCCTGTT
GTCGCACGTCGCGCATGCCCCCCCGTTGAGCCCTCTGCAACCAGAGGCGC
CGGCGCACAGACTGCATGCCGCTTTGCA

Coding sequence (CDS) from alignment at Contig_13:816751..825378-

>mRNA_5821 ID=mRNA_5821|Name=jgi.p|Trimin1|347574|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1089bp|location=Sequence derived from alignment at Contig_13:816751..825378- (Tribonema minus UTEX_B_3156 )
ATGAAGCAAGCTGTAGCAGCGGTAACTTCGGCGCTGGCACTGGTGCAGCT
GGCGGAGACTTTCGACCCAGGCGATGCACGCGAGCTGCGGCAGCCGCAGC
GGCACTACGCACGGGCTATGAGCATGTCCATGGTGCTGGTGCCGCCGCCG
GGGGTCCTAGCTGCCGTGAGGGGGATACTAACGGGGGCGCTGCAGGCTGG
CAGGAACACGGTGGGCGCGGCGGCGCGCGCAATGTGGGCGGAGATGGAGG
GCTGGGCTGTAGCCGGGCTGGGACCGCTGGTGCTGTGGCTGGAGTCGCTG
TTCATAGCGGCGGGGGCGTGGTTTGAGACGCGCATGACCATGCGGCTGCT
GCTGACGGAGATCGGACAGGCGCGCATGACCATGCGGCTGCTGCTGACGG
ATATAGGACAGGCGATGCTGGGGCTGCTGGAAGCCGGTCTCAACACAATG
AGGGCTGAGGTCACACGGCTCGGCGTCGCCGCGGCGTCCGCCAGCAGATC
GCTGCTGCTGCTGCTGCTCGCGCCGCTGCACACGAGGCGGCTGGGGCTGC
TGTTCTGCTGCGGCGTGGCGTTCGTGCTAGCGTGGGCCGCCGCGACTATA
TCCCTCGGCCGCCTCACCGACATGTACAACGCCAAGCAGGCGAAGGGCCT
GTACCTGCGCAAGCGGCCCGTGAAGCGCCGCTGCCCCAACTGCGCGGGCT
TCGGCATCGAGCCGTGCGACCTCTGCGGCAGCACCGGCTTCCGCATCTAT
GAGATGAAGTTCATCTACACGGACCCCTGTCCAAACGAACCACCTGCCGC
ATCGGCGCACTTCTTCGACCCCCTCACCGCCCACGCCGCTGCGCCGGCGG
CGACGCACGTGCATCTGCCGCCGCGCCGCAGGTGCTTCTCGCGGCGCTGG
CAGTGGTGCGGCCGCTGCGGCGGCTCCGGCTGCACGGCCGAGCCGTGGAC
GGCGTGGGCAGCGCCGCGCATCATCTACACGCTGTTCCCGGGGCCAGCTG
CGGTGCCGCAGTCTGTTGCCTGGCTAGACGGCCGTGCACATGGCGCGGGG
CCGTTGAGTGCGGTCCAGCTCACCGGCTCCGCGCACTAG