mRNA_14857 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352652
Unique Name	mRNA_14857
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A835ZBG3_9STRA (SHSP domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG3_9STRA)

HSP 1 Score: 416 bits (1068), Expect = 1.900e-141
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 3

Query:   72 MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEEVSEAAAADLAPSAASIDNTHISIL 995
            MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEEVSEAAAADLAPSAASIDNTHISIL
Sbjct:    1 MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEEVSEAAAADLAPSAASIDNTHISIL 308

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A835YZU5_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.300e-28
Identity = 68/151 (45.03%), Postives = 93/151 (61.59%), Query Frame = 3

Query:  279 FRQSVFQPDATIAQAANAADAFFGTLFNE------LGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 698
            F +++    A I QA+ A +AFFG   ++         P  AR   P   P YE+ + P +Y I+++LPGCS DDV + LEEGGE+LRI+G+RPARG +P GP    RFE+++D+D S      ISA M HG L+V LP V K++A KI I
Sbjct:   44 FNRAMSHQHAAITQASKAFEAFFGEALSQNEAVTTAATPAAAR---PHRQPDYEITELPGSYLINIELPGCSTDDVNITLEEGGEILRIDGQRPARGQQPAGPQFSRRFELNKDIDVSRTGPSGISASMVHGVLTVFLPKVRKSEAVKIPI 191

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A835ZGU0_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU0_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.670e-17
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 3

Query:  456 LDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 698
            ++LPGCS DDV + LEEGGEVLRI+G+ PARG +P GP    RF +S+++D S      +SA M+HG L+V LP V K +A K+ +
Sbjct:    1 MELPGCSKDDVAITLEEGGEVLRIDGQCPARGEQPAGPRFSRRFGLSKEIDVSRTGPSGVSASMAHGVLTVFLPKVHKPEALKVPV 86

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A7C5L7W2_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C5L7W2_9DELT)

HSP 1 Score: 58.5 bits (140), Expect = 6.900e-7
Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 3

Query:  402 QHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR---RPARGLK------PEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 698
            Q +P  E++++P A  +  DLPG   ++V V LE+G  VL I+     +PA G +        G  LR RF +S  +D   ISARM++G L++ELP  A  K + I +
Sbjct:   24 QFVPAVEIYETPEAVVVRADLPGVPRENVKVSLEDG--VLTIDAAMPDQPADGRRMLVQEFERGHYLR-RFTISEAIDQGRISARMTNGVLTLELPKQAPVKPRCIEV 128

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A382ID31_9ZZZZ (SHSP domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A382ID31_9ZZZZ)

HSP 1 Score: 57.8 bits (138), Expect = 1.810e-6
Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 3

Query:  345 FGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPA----------RGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 701
            FG+LFN+         Q     P  ++ +SP+AYT++ DLPG +  DV + +EEG  VL + G R            R  +  G   R  F++   V+T  I A   +G L VELP V  +K  ++ I+
Sbjct:   21 FGSLFNDSFGTSAKTTQTDAWSPAVDIVESPDAYTLTADLPGLTKADVNLTVEEG--VLTLTGERKNEQSASNEFGHRHERAYGKFSR-SFQLGSGVETGKIKAEFRNGMLKVELPKVEASKPYEVSIA 146

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: UPI001AB013F8 (Hsp20/alpha crystallin family protein n=1 Tax=Actinomadura barringtoniae TaxID=1427535 RepID=UPI001AB013F8)

HSP 1 Score: 55.8 bits (133), Expect = 9.890e-6
Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = 3

Query:  345 FGTLFNELGQPL---------VARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE-----GGEVLRIEGRRPARGLKPEGPLLRWRFE--VSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 701
            F  L++++GQ L          AR   P  +PP ++ +S +AYT+ ++LPG S DD+ + L +     GGE++  E R   +  +    + R+ F   +  DV++ ++ AR+  G L++ LP    AK + I +S
Sbjct:   22 FEDLYDQMGQLLNFAFGAPGQEARQDFPW-VPPADISESEDAYTVEIELPGISKDDIDIQLNDRELVVGGEIVEKE-REKGKLRRKTRRVGRFEFRAILPGDVNSDMVDARLRDGVLTLNLPKAETAKPRHIEVS 154

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A7C1IFX2_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C1IFX2_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.090e-5
Identity = 38/121 (31.40%), Postives = 63/121 (52.07%), Query Frame = 3

Query:  381 VARHQQPQHMPPY----EMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPL--------LRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPD 707
            V R +QPQ  P +    +++++P+A T+ LD+PG   +DV V ++ G   LRI G+  A    PE  L            F +S D+DT  ++A M+ G L++ +    K K +KI +  +
Sbjct:   14 VTRREQPQERPVFVPAADIWETPDAITLKLDMPGVGPEDVEVNVQRG--TLRIHGKVNADA--PETVLYAEQRVGDFEREFTLSEDLDTDNVAAAMNAGVLTLTIGKADKVKPRKIAVKAE 130

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A846ZVM5_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=A0A846ZVM5_9DELT)

HSP 1 Score: 55.1 bits (131), Expect = 1.090e-5
Identity = 34/110 (30.91%), Postives = 63/110 (57.27%), Query Frame = 3

Query:  390 HQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR----RPARGLKPEGPLLRWR--FEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 701
            H++P  +P  +++++P A  + +D+PG   DDV V ++ G   + ++GR    R  R L  E  +  ++  F +S D+D   I+A+M+ G L++ +   AK K +KI I+
Sbjct:   21 HERPVFVPAADIWETPEAIVLKMDMPGVGPDDVEVNVQHG--TMTVQGRVATARTERVLYAEQRIGDYQSEFALSEDLDPDTITAQMNAGVLTLTVGKAAKVKPRKIAIT 128

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A1I4VSF2_9NEIS (Molecular chaperone IbpA, HSP20 family n=1 Tax=Formivibrio citricus TaxID=83765 RepID=A0A1I4VSF2_9NEIS)

HSP 1 Score: 54.7 bits (130), Expect = 1.370e-5
Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = 3

Query:  366 LGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR--------RPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 701
            + Q   A   +   +P  ++ +  +   +  DLPG S + + + +E  G+ L IEG           A  ++   P  R  F +S+++DT+ +SA ++HG L + +P VA+A+ QKI ++
Sbjct:    7 VSQAAEASRSEAALIPAVDVIEDASGIVLYADLPGVSKEKLSLQVE--GDTLTIEGEVSIDVPEGMDASHVEVNLPRYRRSFTLSKELDTTKVSAELNHGVLKLHIPKVAQAQPQKIKVN 124

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BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A5B9PCR7_9BACT (Spore protein SP21 n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PCR7_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.960e-5
Identity = 42/132 (31.82%), Postives = 63/132 (47.73%), Query Frame = 3

Query:  327 NAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE------GGEVLRI--EGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 698
            N  D FFG      G  L+         PP  + +S   +++ ++LPG S DDV + ++E      G +V+    EG+R A+  +  G   R +FE +  +D   ISA    G LS+ELP   K   +KI I
Sbjct:   19 NLFDHFFGNQQTSQGCKLI---------PPANVTESDTGFSLVMELPGVSADDVSIEMKENLLVVHGKKVVDKPGEGQRLAKSERRGGAFAR-KFEFASQIDADGISAEFKDGLLSIELPKSEKVLPRKIEI 140

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352652 vs. uniprot

BLAST of jgi.p|Trimin1|352652 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
A0A835ZBG3_9STRA	1.900e-141	100.00	SHSP domain-containing protein n=2 Tax=Tribonema m...	[more]
A0A835YZU5_9STRA	1.300e-28	45.03	SHSP domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A835ZGU0_9STRA	5.670e-17	51.16	SHSP domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A7C5L7W2_9DELT	6.900e-7	37.04	Hsp20/alpha crystallin family protein n=1 Tax=Desu...	[more]
A0A382ID31_9ZZZZ	1.810e-6	32.56	SHSP domain-containing protein n=2 Tax=root TaxID=...	[more]
UPI001AB013F8	9.890e-6	29.63	Hsp20/alpha crystallin family protein n=1 Tax=Acti...	[more]
A0A7C1IFX2_9BACT	1.090e-5	31.40	Hsp20/alpha crystallin family protein n=1 Tax=Phyc...	[more]
A0A846ZVM5_9DELT	1.090e-5	30.91	Hsp20/alpha crystallin family protein n=1 Tax=Smit...	[more]
A0A1I4VSF2_9NEIS	1.370e-5	27.50	Molecular chaperone IbpA, HSP20 family n=1 Tax=For...	[more]
A0A5B9PCR7_9BACT	1.960e-5	31.82	Spore protein SP21 n=1 Tax=Mariniblastus fucicola ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_127	contig	Contig_127:203720..205493 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352652\|estExt_Genemark1.C_Ctg_1270027
BRITE	ko00000,ko00001,ko03110
KEGG Pathway	ko04141,map04141
KEGG ko	ko:K13993
Description	Belongs to the small heat shock protein (HSP20) family
COG category	O
Max annot lvl	1236\|Gammaproteobacteria
EggNOG OGs	COG0071@1\|root,COG0071@2\|Bacteria,1N7C7@1224\|Proteobacteria,1S607@1236\|Gammaproteobacteria,468FQ@72275\|Alteromonadaceae
Evalue	1.64e-08
Seed ortholog	1232683.ADIMK_0751
Hectar predicted targeting category	signal peptide
TranscriptId	352974
Track	FilteredModels1
ProteinId	352652

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352652	gene_14857	Tribonema minus UTEX_B_3156	gene	Contig_127 203720..205493 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_14857_2	exon_14857_2	Tribonema minus UTEX_B_3156	exon	Contig_127 203720..204494 -
exon_14857_1	exon_14857_1	Tribonema minus UTEX_B_3156	exon	Contig_127 204930..205493 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_14857	UTR3_14857	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_127 203720..204060 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_14857	CDS_14857	Tribonema minus UTEX_B_3156	CDS	Contig_127 204930..205422 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_14857	UTR5_14857	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_127 205423..205493 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352652	Trimin1\|352652\|estExt_Genemark1.C_Ctg_1270027	Tribonema minus UTEX_B_3156	polypeptide	Contig_127 204061..205422 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_127:203720..205493-
coding sequence from alignment at Contig_127:203720..205493-

spliced messenger RNA

>mRNA_14857 ID=mRNA_14857|Name=jgi.p|Trimin1|352652|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1339bp|location=Sequence derived from alignment at Contig_127:203720..205493- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGCAAGCTTGCAAGCAGCCAACCAGCACATCAAAAGAGGTCAGCATATT
CAGTCACCAACCTCGGAAAGTATGGCACCACTGATGAACAAGCAATCCGC
TTTGGCCGCCTTGGCGATCTTCGCTCTCGCCAACTCGGCAAGCGCCGCCA
ATTGCATGCAGCAGCAGCACCCCCAGCACCAGGTCCAGCATCAAGTCCAG
CAGCAGCAGCAGCAAAAGCAGCAGCAGCAACAGCAGCGTCCCCACCGTCG
CTCGTCCGATGGCCTGTTCTCTCCGAGGTTCCGGCAGTCCGTGTTCCAGC
CCGACGCCACCATCGCTCAGGCAGCGAATGCCGCGGACGCTTTCTTCGGC
ACCCTCTTCAACGAGCTCGGCCAGCCTCTCGTCGCGCGGCACCAGCAGCC
CCAGCACATGCCGCCCTATGAGATGTTCAAGTCCCCCAACGCCTACACCA
TCTCGCTGGACCTCCCCGGTTGCTCCATGGACGATGTGATGGTGATGCTA
GAGGAGGGAGGCGAGGTGCTGCGCATTGAGGGCCGCCGCCCCGCCCGTGG
TCTCAAGCCCGAAGGCCCCCTCCTTCGCTGGCGCTTTGAGGTGAGCAGGG
ATGTGGACACATCGCTCATCAGCGCGCGCATGTCGCACGGCACGCTCTCC
GTGGAGCTGCCGCTCGTGGCCAAGGCCAAGGCGCAGAAGATCCACATTAG
CCCTGATGATGATGATCAGCAGCAGCAGCAGCAGCAGCAGCACGCCTCAA
CGCAGCACAGCTCAGCGCTGCCCGCTGGCCAGGAGGAGCAGCCCCAGCGG
GATGATGATCAGCAGCAGCAGCAGCAGCAGCAACTCGAGGAGGCAAGCGC
GCCGCAGCAGCAGCAGCAGCAGCACAACAAGCAGTACGAGACGGCTGAGC
CGGATGTAATTGTAGAGGAGGAGGTGTCAGAGGCAGCAGCGGCAGATCTG
GCGCCGTCGGCAGCTTCCATCGACAACACGCACATCAGCATCTTGTGAAC
TGCCCTCGCGGGCTTCAGGTGCACACAGTAGAAATAGTTGATCATTGCAT
TTGGTAAGGCGCTGCTGCGTCGGCTGGAGGTGTGACTCAGCATCGGGCTA
GGGTTAGGGTTAGGGCTAGCCGTAGACCCTGATGCTAGTTGAAGTTGCTG
TGTTGGGCAGCAGCATGTGCAAGGGCCCCTGTAACGGTAATACGATAGAA
GACGATGGTGTGCCAACTGCGACAGCCGCTGGTGTTGCAGCTGCGAAAGA
CATGCAAAGTGTCGGTGAGCGTCGCAGTGGCTAGGCCGGAACGCTGCATC
CGCAATGCGGTTGTGTAAATACACAATGGTATTCCTGAA

protein sequence of jgi.p|Trimin1|352652

>Trimin1|352652|estExt_Genemark1.C_Ctg_1270027 ID=Trimin1|352652|estExt_Genemark1.C_Ctg_1270027|Name=jgi.p|Trimin1|352652|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=309bp
MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVQHQVQQQQQQKQ
QQQQQRPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELG
QPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVL
RIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVA
KAKAQKIHISPDDDDQQQQQQQQHASTQHSSALPAGQEEQPQRDDDQQQQ
QQQQLEEASAPQQQQQQHNKQYETAEPDVIVEEEVSEAAAADLAPSAASI
DNTHISIL*

mRNA from alignment at Contig_127:203720..205493-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_14857 ID=mRNA_14857|Name=jgi.p|Trimin1|352652|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1774bp|location=Sequence derived from alignment at Contig_127:203720..205493- (Tribonema minus UTEX_B_3156 )
CAGCAAGCTTGCAAGCAGCCAACCAGCACATCAAAAGAGGTCAGCATATT
CAGTCACCAACCTCGGAAAGTATGGCACCACTGATGAACAAGCAATCCGC
TTTGGCCGCCTTGGCGATCTTCGCTCTCGCCAACTCGGCAAGCGCCGCCA
ATTGCATGCAGCAGCAGCACCCCCAGCACCAGGTCCAGCATCAAGTCCAG
CAGCAGCAGCAGCAAAAGCAGCAGCAGCAACAGCAGCGTCCCCACCGTCG
CTCGTCCGATGGCCTGTTCTCTCCGAGGTTCCGGCAGTCCGTGTTCCAGC
CCGACGCCACCATCGCTCAGGCAGCGAATGCCGCGGACGCTTTCTTCGGC
ACCCTCTTCAACGAGCTCGGCCAGCCTCTCGTCGCGCGGCACCAGCAGCC
CCAGCACATGCCGCCCTATGAGATGTTCAAGTCCCCCAACGCCTACACCA
TCTCGCTGGACCTCCCCGGTTGCTCCATGGACGATGTGATGGTGATGCTA
GAGGAGGGAGGCGAGGTGCTGCGCATTGAGGGCCGCCGCCCCGCCCGTGG
TCTCAAGCCCGAAGGTATGTGATGCTTACACACTTACTTGAATAGTGGTT
GCAGATAGTTGTGATGTACCATTGCTCAACTTGCGGATGGCATCCACCAA
CTGCAGTCATATGCCTGCAGTGGTCTTTCACAAGCAACCGACTTTGAGGC
GTATGATGTGCTTGGTTGTGGGCCTGATTGTATGCAATTTCTCTCAAAGA
CTTGAGCAAGGCAATATTACTCGCTGCGTTGCCAGTGTCTGCAATTCACA
CAGTGATGTCATCATGGCGCACGCGGTGGGCCGTTGCATATAAACCGGAC
TCATTGCGCAGATACTTCGAAGTATATATGAGCCCACAACGCTTTGATGG
CTTGAAACAAACCATTTCCAGCCTGATAAGTAAGCTTTGATCAGTCTCAA
ATTCCGTTGGCACTCATTGTTCTCGCTTCATTTCTCCTTGCATCCCCAGG
CCCCCTCCTTCGCTGGCGCTTTGAGGTGAGCAGGGATGTGGACACATCGC
TCATCAGCGCGCGCATGTCGCACGGCACGCTCTCCGTGGAGCTGCCGCTC
GTGGCCAAGGCCAAGGCGCAGAAGATCCACATTAGCCCTGATGATGATGA
TCAGCAGCAGCAGCAGCAGCAGCAGCACGCCTCAACGCAGCACAGCTCAG
CGCTGCCCGCTGGCCAGGAGGAGCAGCCCCAGCGGGATGATGATCAGCAG
CAGCAGCAGCAGCAGCAACTCGAGGAGGCAAGCGCGCCGCAGCAGCAGCA
GCAGCAGCACAACAAGCAGTACGAGACGGCTGAGCCGGATGTAATTGTAG
AGGAGGAGGTGTCAGAGGCAGCAGCGGCAGATCTGGCGCCGTCGGCAGCT
TCCATCGACAACACGCACATCAGCATCTTGTGAACTGCCCTCGCGGGCTT
CAGGTGCACACAGTAGAAATAGTTGATCATTGCATTTGGTAAGGCGCTGC
TGCGTCGGCTGGAGGTGTGACTCAGCATCGGGCTAGGGTTAGGGTTAGGG
CTAGCCGTAGACCCTGATGCTAGTTGAAGTTGCTGTGTTGGGCAGCAGCA
TGTGCAAGGGCCCCTGTAACGGTAATACGATAGAAGACGATGGTGTGCCA
ACTGCGACAGCCGCTGGTGTTGCAGCTGCGAAAGACATGCAAAGTGTCGG
TGAGCGTCGCAGTGGCTAGGCCGGAACGCTGCATCCGCAATGCGGTTGTG
TAAATACACAATGGTATTCCTGAA

Coding sequence (CDS) from alignment at Contig_127:203720..205493-

>mRNA_14857 ID=mRNA_14857|Name=jgi.p|Trimin1|352652|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=927bp|location=Sequence derived from alignment at Contig_127:203720..205493- (Tribonema minus UTEX_B_3156 )
ATGGCACCACTGATGAACAAGCAATCCGCTTTGGCCGCCTTGGCGATCTT
CGCTCTCGCCAACTCGGCAAGCGCCGCCAATTGCATGCAGCAGCAGCACC
CCCAGCACCAGGTCCAGCATCAAGTCCAGCAGCAGCAGCAGCAAAAGCAG
CAGCAGCAACAGCAGCGTCCCCACCGTCGCTCGTCCGATGGCCTGTTCTC
TCCGAGGTTCCGGCAGTCCGTGTTCCAGCCCGACGCCACCATCGCTCAGG
CAGCGAATGCCGCGGACGCTTTCTTCGGCACCCTCTTCAACGAGCTCGGC
CAGCCTCTCGTCGCGCGGCACCAGCAGCCCCAGCACATGCCGCCCTATGA
GATGTTCAAGTCCCCCAACGCCTACACCATCTCGCTGGACCTCCCCGGTT
GCTCCATGGACGATGTGATGGTGATGCTAGAGGAGGGAGGCGAGGTGCTG
CGCATTGAGGGCCGCCGCCCCGCCCGTGGTCTCAAGCCCGAAGGCCCCCT
CCTTCGCTGGCGCTTTGAGGTGAGCAGGGATGTGGACACATCGCTCATCA
GCGCGCGCATGTCGCACGGCACGCTCTCCGTGGAGCTGCCGCTCGTGGCC
AAGGCCAAGGCGCAGAAGATCCACATTAGCCCTGATGATGATGATCAGCA
GCAGCAGCAGCAGCAGCAGCACGCCTCAACGCAGCACAGCTCAGCGCTGC
CCGCTGGCCAGGAGGAGCAGCCCCAGCGGGATGATGATCAGCAGCAGCAG
CAGCAGCAGCAACTCGAGGAGGCAAGCGCGCCGCAGCAGCAGCAGCAGCA
GCACAACAAGCAGTACGAGACGGCTGAGCCGGATGTAATTGTAGAGGAGG
AGGTGTCAGAGGCAGCAGCGGCAGATCTGGCGCCGTCGGCAGCTTCCATC
GACAACACGCACATCAGCATCTTGTGA