Trimin1|352652|estExt_Genemark1.C_Ctg_1270027 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352652
Unique NameTrimin1|352652|estExt_Genemark1.C_Ctg_1270027
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length309
Homology
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A835ZBG3_9STRA (SHSP domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG3_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 3.520e-143
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
Query:    1 MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEEVSEAAAADLAPSAASIDNTHISIL 308
            MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEEVSEAAAADLAPSAASIDNTHISIL
Sbjct:    1 MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEEVSEAAAADLAPSAASIDNTHISIL 308          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A835YZU5_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.010e-29
Identity = 68/151 (45.03%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   70 FRQSVFQPDATIAQAANAADAFFGTLFNE------LGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 209
            F +++    A I QA+ A +AFFG   ++         P  AR   P   P YE+ + P +Y I+++LPGCS DDV + LEEGGE+LRI+G+RPARG +P GP    RFE+++D+D S      ISA M HG L+V LP V K++A KI I
Sbjct:   44 FNRAMSHQHAAITQASKAFEAFFGEALSQNEAVTTAATPAAAR---PHRQPDYEITELPGSYLINIELPGCSTDDVNITLEEGGEILRIDGQRPARGQQPAGPQFSRRFELNKDIDVSRTGPSGISASMVHGVLTVFLPKVRKSEAVKIPI 191          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A835ZGU0_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU0_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.420e-17
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0
Query:  129 LDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 209
            ++LPGCS DDV + LEEGGEVLRI+G+ PARG +P GP    RF +S+++D S      +SA M+HG L+V LP V K +A K+ +
Sbjct:    1 MELPGCSKDDVAITLEEGGEVLRIDGQCPARGEQPAGPRFSRRFGLSKEIDVSRTGPSGVSASMAHGVLTVFLPKVHKPEALKVPV 86          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A7C5L7W2_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C5L7W2_9DELT)

HSP 1 Score: 58.5 bits (140), Expect = 3.990e-7
Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
Query:  111 QHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR---RPARGLK------PEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 209
            Q +P  E++++P A  +  DLPG   ++V V LE+G  VL I+     +PA G +        G  LR RF +S  +D   ISARM++G L++ELP  A  K + I +
Sbjct:   24 QFVPAVEIYETPEAVVVRADLPGVPRENVKVSLEDG--VLTIDAAMPDQPADGRRMLVQEFERGHYLR-RFTISEAIDQGRISARMTNGVLTLELPKQAPVKPRCIEV 128          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A382ID31_9ZZZZ (SHSP domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A382ID31_9ZZZZ)

HSP 1 Score: 57.8 bits (138), Expect = 1.040e-6
Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 0
Query:   92 FGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPA----------RGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 210
            FG+LFN+         Q     P  ++ +SP+AYT++ DLPG +  DV + +EEG  VL + G R            R  +  G   R  F++   V+T  I A   +G L VELP V  +K  ++ I+
Sbjct:   21 FGSLFNDSFGTSAKTTQTDAWSPAVDIVESPDAYTLTADLPGLTKADVNLTVEEG--VLTLTGERKNEQSASNEFGHRHERAYGKFSR-SFQLGSGVETGKIKAEFRNGMLKVELPKVEASKPYEVSIA 146          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: UPI001AB013F8 (Hsp20/alpha crystallin family protein n=1 Tax=Actinomadura barringtoniae TaxID=1427535 RepID=UPI001AB013F8)

HSP 1 Score: 55.8 bits (133), Expect = 5.770e-6
Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = 0
Query:   92 FGTLFNELGQPL---------VARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE-----GGEVLRIEGRRPARGLKPEGPLLRWRFE--VSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 210
            F  L++++GQ L          AR   P  +PP ++ +S +AYT+ ++LPG S DD+ + L +     GGE++  E R   +  +    + R+ F   +  DV++ ++ AR+  G L++ LP    AK + I +S
Sbjct:   22 FEDLYDQMGQLLNFAFGAPGQEARQDFPW-VPPADISESEDAYTVEIELPGISKDDIDIQLNDRELVVGGEIVEKE-REKGKLRRKTRRVGRFEFRAILPGDVNSDMVDARLRDGVLTLNLPKAETAKPRHIEVS 154          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A7C1IFX2_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C1IFX2_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 6.610e-6
Identity = 38/121 (31.40%), Postives = 63/121 (52.07%), Query Frame = 0
Query:  104 VARHQQPQHMPPY----EMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPL--------LRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPD 212
            V R +QPQ  P +    +++++P+A T+ LD+PG   +DV V ++ G   LRI G+  A    PE  L            F +S D+DT  ++A M+ G L++ +    K K +KI +  +
Sbjct:   14 VTRREQPQERPVFVPAADIWETPDAITLKLDMPGVGPEDVEVNVQRG--TLRIHGKVNADA--PETVLYAEQRVGDFEREFTLSEDLDTDNVAAAMNAGVLTLTIGKADKVKPRKIAVKAE 130          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A846ZVM5_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=A0A846ZVM5_9DELT)

HSP 1 Score: 55.1 bits (131), Expect = 6.610e-6
Identity = 34/110 (30.91%), Postives = 63/110 (57.27%), Query Frame = 0
Query:  107 HQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR----RPARGLKPEGPLLRWR--FEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 210
            H++P  +P  +++++P A  + +D+PG   DDV V ++ G   + ++GR    R  R L  E  +  ++  F +S D+D   I+A+M+ G L++ +   AK K +KI I+
Sbjct:   21 HERPVFVPAADIWETPEAIVLKMDMPGVGPDDVEVNVQHG--TMTVQGRVATARTERVLYAEQRIGDYQSEFALSEDLDPDTITAQMNAGVLTLTVGKAAKVKPRKIAIT 128          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A1I4VSF2_9NEIS (Molecular chaperone IbpA, HSP20 family n=1 Tax=Formivibrio citricus TaxID=83765 RepID=A0A1I4VSF2_9NEIS)

HSP 1 Score: 54.7 bits (130), Expect = 8.310e-6
Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = 0
Query:   99 LGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR--------RPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIS 210
            + Q   A   +   +P  ++ +  +   +  DLPG S + + + +E  G+ L IEG           A  ++   P  R  F +S+++DT+ +SA ++HG L + +P VA+A+ QKI ++
Sbjct:    7 VSQAAEASRSEAALIPAVDVIEDASGIVLYADLPGVSKEKLSLQVE--GDTLTIEGEVSIDVPEGMDASHVEVNLPRYRRSFTLSKELDTTKVSAELNHGVLKLHIPKVAQAQPQKIKVN 124          
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Match: A0A5B9PCR7_9BACT (Spore protein SP21 n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PCR7_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.170e-5
Identity = 42/132 (31.82%), Postives = 63/132 (47.73%), Query Frame = 0
Query:   86 NAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE------GGEVLRI--EGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 209
            N  D FFG      G  L+         PP  + +S   +++ ++LPG S DDV + ++E      G +V+    EG+R A+  +  G   R +FE +  +D   ISA    G LS+ELP   K   +KI I
Sbjct:   19 NLFDHFFGNQQTSQGCKLI---------PPANVTESDTGFSLVMELPGVSADDVSIEMKENLLVVHGKKVVDKPGEGQRLAKSERRGGAFAR-KFEFASQIDADGISAEFKDGLLSIELPKSEKVLPRKIEI 140          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352652 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835ZBG3_9STRA3.520e-143100.00SHSP domain-containing protein n=2 Tax=Tribonema m... [more]
A0A835YZU5_9STRA1.010e-2945.03SHSP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835ZGU0_9STRA1.420e-1751.16SHSP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7C5L7W2_9DELT3.990e-737.04Hsp20/alpha crystallin family protein n=1 Tax=Desu... [more]
A0A382ID31_9ZZZZ1.040e-632.56SHSP domain-containing protein n=2 Tax=root TaxID=... [more]
UPI001AB013F85.770e-629.63Hsp20/alpha crystallin family protein n=1 Tax=Acti... [more]
A0A7C1IFX2_9BACT6.610e-631.40Hsp20/alpha crystallin family protein n=1 Tax=Phyc... [more]
A0A846ZVM5_9DELT6.610e-630.91Hsp20/alpha crystallin family protein n=1 Tax=Smit... [more]
A0A1I4VSF2_9NEIS8.310e-627.50Molecular chaperone IbpA, HSP20 family n=1 Tax=For... [more]
A0A5B9PCR7_9BACT1.170e-531.82Spore protein SP21 n=1 Tax=Mariniblastus fucicola ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..237
NoneNo IPR availablePANTHERPTHR43670:SF73OS03G0656000 PROTEINcoord: 112..272
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 117..197
e-value: 1.79324E-13
score: 62.9568
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 119..209
e-value: 1.5E-6
score: 28.3
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 107..212
score: 16.460623
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 27..210
e-value: 2.7E-15
score: 58.4
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 109..209
IPR045045Small heat shock protein RTM2-likePANTHERPTHR43670HEAT SHOCK PROTEIN 26coord: 112..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_127contigContig_127:204061..205422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352652mRNA_14857Tribonema minus UTEX_B_3156 mRNAContig_127 203720..205493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352652|estExt_Genemark1.C_Ctg_1270027 ID=Trimin1|352652|estExt_Genemark1.C_Ctg_1270027|Name=jgi.p|Trimin1|352652|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=309bp
MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVQHQVQQQQQQKQ
QQQQQRPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELG
QPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVL
RIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVA
KAKAQKIHISPDDDDQQQQQQQQHASTQHSSALPAGQEEQPQRDDDQQQQ
QQQQLEEASAPQQQQQQHNKQYETAEPDVIVEEEVSEAAAADLAPSAASI
DNTHISIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
IPR045045RTM2-like