mRNA_14856 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352651
Unique Name	mRNA_14856
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A835ZBG3_9STRA (SHSP domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG3_9STRA)

HSP 1 Score: 350 bits (897), Expect = 1.610e-115
Identity = 277/317 (87.38%), Postives = 280/317 (88.33%), Query Frame = 1

Query:   82 MAPLMNKQSALAALAVLALANSTSAANCMQXXXXXXXXXXXXXXXXXXXXXXR---PHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHINPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSEAAAADLAPSAVSIDNTHISIL 1023
            MAPLMNKQSALAALA+ ALANS SAANCMQ        XXXXXXXXXXXXXX    PHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPL ARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGL+PEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI+PDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     VSEAAAADLAPSA SIDNTHISIL
Sbjct:    1 MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEE---------VSEAAAADLAPSAASIDNTHISIL 308

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A835YZU5_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.010e-29
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 1

Query:  280 FRQSVFQPDATIAQAANAADAFFGTLFNE------LGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 699
            F +++    A I QA+ A +AFFG   ++         P AAR   P   P YE+ + P +Y I+++LPGCS DDV + LEEGGE+LRI+G+RPARG +P GP    RFE+++D+D S      ISA M HG L+V LP V K++A KI I
Sbjct:   44 FNRAMSHQHAAITQASKAFEAFFGEALSQNEAVTTAATPAAAR---PHRQPDYEITELPGSYLINIELPGCSTDDVNITLEEGGEILRIDGQRPARGQQPAGPQFSRRFELNKDIDVSRTGPSGISASMVHGVLTVFLPKVRKSEAVKIPI 191

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A835ZGU0_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.080e-16
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 1

Query:  457 LDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 699
            ++LPGCS DDV + LEEGGEVLRI+G+ PARG +P GP    RF +S+++D S      +SA M+HG L+V LP V K +A K+ +
Sbjct:    1 MELPGCSKDDVAITLEEGGEVLRIDGQCPARGEQPAGPRFSRRFGLSKEIDVSRTGPSGVSASMAHGVLTVFLPKVHKPEALKVPV 86

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A7C5L7W2_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C5L7W2_9DELT)

HSP 1 Score: 59.3 bits (142), Expect = 3.730e-7
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 1

Query:  403 QHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR---RPARGLR------PEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 699
            Q +P  E++++P A  +  DLPG   ++V V LE+G  VL I+     +PA G R        G  LR RF +S  +D   ISARM++G L++ELP  A  K + I +
Sbjct:   24 QFVPAVEIYETPEAVVVRADLPGVPRENVKVSLEDG--VLTIDAAMPDQPADGRRMLVQEFERGHYLR-RFTISEAIDQGRISARMTNGVLTLELPKQAPVKPRCIEV 128

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A382ID31_9ZZZZ (SHSP domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A382ID31_9ZZZZ)

HSP 1 Score: 59.7 bits (143), Expect = 3.890e-7
Identity = 44/128 (34.38%), Postives = 63/128 (49.22%), Query Frame = 1

Query:  346 FGTLFNELGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPA----------RGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 699
            FG+LFN+     A   Q     P  ++ +SP+AYT++ DLPG +  DV + +EEG  VL + G R            R  R  G   R  F++   V+T  I A   +G L VELP V  +K  ++ I
Sbjct:   21 FGSLFNDSFGTSAKTTQTDAWSPAVDIVESPDAYTLTADLPGLTKADVNLTVEEG--VLTLTGERKNEQSASNEFGHRHERAYGKFSR-SFQLGSGVETGKIKAEFRNGMLKVELPKVEASKPYEVSI 145

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A1I4VSF2_9NEIS (Molecular chaperone IbpA, HSP20 family n=1 Tax=Formivibrio citricus TaxID=83765 RepID=A0A1I4VSF2_9NEIS)

HSP 1 Score: 55.8 bits (133), Expect = 5.420e-6
Identity = 36/122 (29.51%), Postives = 62/122 (50.82%), Query Frame = 1

Query:  367 LGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEG----------PLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIN 702
            + Q   A   +   +P  ++ +  +   +  DLPG S + + + +E  G+ L IEG        PEG          P  R  F +S+++DT+ +SA ++HG L + +P VA+A+ QKI +N
Sbjct:    7 VSQAAEASRSEAALIPAVDVIEDASGIVLYADLPGVSKEKLSLQVE--GDTLTIEGEVSIDV--PEGMDASHVEVNLPRYRRSFTLSKELDTTKVSAELNHGVLKLHIPKVAQAQPQKIKVN 124

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: UPI001AB013F8 (Hsp20/alpha crystallin family protein n=1 Tax=Actinomadura barringtoniae TaxID=1427535 RepID=UPI001AB013F8)

HSP 1 Score: 55.8 bits (133), Expect = 9.940e-6
Identity = 42/142 (29.58%), Postives = 70/142 (49.30%), Query Frame = 1

Query:  346 FGTLFNELGQPL---------AARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE-----GGEVLRIEGRRPARGLRPEGPLLRWRFEVSR---------DVDTSLISARMSHGTLSVELPLVAKAKAQKIHIN 702
            F  L++++GQ L          AR   P  +PP ++ +S +AYT+ ++LPG S DD+ + L +     GGE++  E        R +G L R    V R         DV++ ++ AR+  G L++ LP    AK + I ++
Sbjct:   22 FEDLYDQMGQLLNFAFGAPGQEARQDFPW-VPPADISESEDAYTVEIELPGISKDDIDIQLNDRELVVGGEIVEKE--------REKGKLRRKTRRVGRFEFRAILPGDVNSDMVDARLRDGVLTLNLPKAETAKPRHIEVS 154

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A5B9PCR7_9BACT (Spore protein SP21 n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PCR7_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.970e-5
Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = 1

Query:  328 NAADAFFGTLFNELGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE------GGEVLRI--EGRRPARGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 699
            N  D FFG      G  L         +PP  + +S   +++ ++LPG S DDV + ++E      G +V+    EG+R A+  R  G   R +FE +  +D   ISA    G LS+ELP   K   +KI I
Sbjct:   19 NLFDHFFGNQQTSQGCKL---------IPPANVTESDTGFSLVMELPGVSADDVSIEMKENLLVVHGKKVVDKPGEGQRLAKSERRGGAFAR-KFEFASQIDADGISAEFKDGLLSIELPKSEKVLPRKIEI 140

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A846ZVM5_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=A0A846ZVM5_9DELT)

HSP 1 Score: 54.3 bits (129), Expect = 2.040e-5
Identity = 34/109 (31.19%), Postives = 62/109 (56.88%), Query Frame = 1

Query:  391 HQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR----RPARGLRPEGPLLRWR--FEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 699
            H++P  +P  +++++P A  + +D+PG   DDV V ++ G   + ++GR    R  R L  E  +  ++  F +S D+D   I+A+M+ G L++ +   AK K +KI I
Sbjct:   21 HERPVFVPAADIWETPEAIVLKMDMPGVGPDDVEVNVQHG--TMTVQGRVATARTERVLYAEQRIGDYQSEFALSEDLDPDTITAQMNAGVLTLTVGKAAKVKPRKIAI 127

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BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A7C1IFX2_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C1IFX2_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 5.160e-5
Identity = 37/119 (31.09%), Postives = 62/119 (52.10%), Query Frame = 1

Query:  388 RHQQPQHMPPY----EMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPL--------LRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHINPD 708
            R +QPQ  P +    +++++P+A T+ LD+PG   +DV V ++ G   LRI G+  A    PE  L            F +S D+DT  ++A M+ G L++ +    K K +KI +  +
Sbjct:   16 RREQPQERPVFVPAADIWETPDAITLKLDMPGVGPEDVEVNVQRG--TLRIHGKVNADA--PETVLYAEQRVGDFEREFTLSEDLDTDNVAAAMNAGVLTLTIGKADKVKPRKIAVKAE 130

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352651 vs. uniprot

BLAST of jgi.p|Trimin1|352651 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
A0A835ZBG3_9STRA	1.610e-115	87.38	SHSP domain-containing protein n=2 Tax=Tribonema m...	[more]
A0A835YZU5_9STRA	5.010e-29	45.70	SHSP domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A835ZGU0_9STRA	1.080e-16	51.16	SHSP domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A7C5L7W2_9DELT	3.730e-7	37.96	Hsp20/alpha crystallin family protein n=1 Tax=Desu...	[more]
A0A382ID31_9ZZZZ	3.890e-7	34.38	SHSP domain-containing protein n=2 Tax=root TaxID=...	[more]
A0A1I4VSF2_9NEIS	5.420e-6	29.51	Molecular chaperone IbpA, HSP20 family n=1 Tax=For...	[more]
UPI001AB013F8	9.940e-6	29.58	Hsp20/alpha crystallin family protein n=1 Tax=Acti...	[more]
A0A5B9PCR7_9BACT	1.970e-5	32.58	Spore protein SP21 n=1 Tax=Mariniblastus fucicola ...	[more]
A0A846ZVM5_9DELT	2.040e-5	31.19	Hsp20/alpha crystallin family protein n=1 Tax=Smit...	[more]
A0A7C1IFX2_9BACT	5.160e-5	31.09	Hsp20/alpha crystallin family protein n=1 Tax=Phyc...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_127	contig	Contig_127:197810..199567 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352651\|estExt_Genemark1.C_Ctg_1270026
BRITE	ko00000,ko00001,ko03110
KEGG Pathway	ko04141,map04141
KEGG ko	ko:K13993
Description	Belongs to the small heat shock protein (HSP20) family
COG category	O
Max annot lvl	1236\|Gammaproteobacteria
EggNOG OGs	COG0071@1\|root,COG0071@2\|Bacteria,1N7C7@1224\|Proteobacteria,1S607@1236\|Gammaproteobacteria,468FQ@72275\|Alteromonadaceae
Evalue	1.25e-08
Seed ortholog	1232683.ADIMK_0751
Hectar predicted targeting category	signal peptide
TranscriptId	352973
Track	FilteredModels1
ProteinId	352651

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352651	gene_14856	Tribonema minus UTEX_B_3156	gene	Contig_127 197810..199567 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_14856_1	exon_14856_1	Tribonema minus UTEX_B_3156	exon	Contig_127 197810..198374 +
exon_14856_2	exon_14856_2	Tribonema minus UTEX_B_3156	exon	Contig_127 198791..199567 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_14856	UTR5_14856	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_127 197810..197890 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_14856	CDS_14856	Tribonema minus UTEX_B_3156	CDS	Contig_127 197891..198374 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_14856	UTR3_14856	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_127 199252..199567 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352651	Trimin1\|352651\|estExt_Genemark1.C_Ctg_1270026	Tribonema minus UTEX_B_3156	polypeptide	Contig_127 197891..199251 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_127:197810..199567+
coding sequence from alignment at Contig_127:197810..199567+

spliced messenger RNA

>mRNA_14856 ID=mRNA_14856|Name=jgi.p|Trimin1|352651|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1342bp|location=Sequence derived from alignment at Contig_127:197810..199567+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CACGCACGCACAGCAAGCTTGCAAGCAGCCAACCAGCACATCAAAAGAGG
TCAGCATATCCAGTCACCAACCTCGGAAAGTATGGCTCCACTGATGAACA
AGCAATCCGCCCTGGCCGCCTTAGCAGTTCTCGCCCTCGCCAACTCGACA
AGCGCCGCCAACTGCATGCAGCAGCAGCACCACCACCAGCATCAAGTCCA
GCAGCAGCAGCAGCAAAACCAGCAGCAGCAACAGCAGCGTCCTCACCGTC
GCTCGTCCGATGGCCTCTTCTCTCCGAGGTTCCGGCAGTCCGTGTTTCAG
CCCGACGCCACCATCGCTCAGGCAGCGAATGCCGCGGACGCTTTCTTCGG
CACCCTCTTCAACGAGCTCGGCCAGCCTCTGGCGGCGCGGCACCAGCAGC
CGCAGCACATGCCGCCGTACGAGATGTTCAAGTCGCCCAACGCCTACACC
ATCTCGCTGGACCTCCCCGGTTGCTCCATGGACGATGTGATGGTGATGCT
AGAGGAGGGAGGCGAGGTGCTGCGTATTGAGGGCCGCCGCCCCGCCCGTG
GTCTCAGGCCCGAAGGCCCCCTTCTTCGCTGGCGCTTTGAGGTGAGCAGG
GATGTGGACACATCGCTCATCAGCGCGCGCATGTCGCACGGCACGCTCTC
CGTGGAGCTGCCGCTCGTGGCCAAGGCAAAGGCGCAGAAGATCCACATCA
ATCCTGATGATGACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CTTGCCTCAATGCAGCACGGCTCAGCTGCTGCGCAGCAGTCACCGCTGCC
CGCTGGCCAGGAGGAGCAACCCCAGCGGGATGATGCTCAGCAGCAGCAGC
AGCAGCAGCAACACGAGGAGGCAAGCGTGCCACAGCAGCAGCAGCAGCAG
CACAGCGAGCAGCAAGAGACGGCTGAGCCGGATGTAATTGTAGAGGAGGA
GGTGTCAGAGGCAGCGGCGGCAGATCTGGCGCCGTCTGCAGTTTCCATCG
ACAACACGCACATCAGCATCTTGTGAACTGCCCTCGCGGGCTTCAGGTGC
ACATAGTAGAAATAGTTGATTTGCATTTGGTAAGACGCTGTTGCCTGGGC
TGGAGGTGTGATTCAGCATCATGTTAGAGTTAGGGCTAGGGCTTGCCTTA
GACCCTGATCCTAGTTGAAGTTGCTGTGTTGGGCATCAGCAGCTCGTGCG
ACTGTAGGTACACGCGAAAACGCATCTTGTATCAACAGTAGTCATGGTGT
GCAGTTTTGAGAGAGGCTGGAACCCTGCGCAGCACCAAGGACGGAACGCT
GCATTTACAATGCAGCCTTGTAAATACATGAGTTTTTTTTCA

protein sequence of jgi.p|Trimin1|352651

>Trimin1|352651|estExt_Genemark1.C_Ctg_1270026 ID=Trimin1|352651|estExt_Genemark1.C_Ctg_1270026|Name=jgi.p|Trimin1|352651|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=315bp
MAPLMNKQSALAALAVLALANSTSAANCMQQQHHHQHQVQQQQQQNQQQQ
QQRPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPL
AARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIE
GRRPARGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAK
AQKIHINPDDDQQQQQQQQQQQQLASMQHGSAAAQQSPLPAGQEEQPQRD
DAQQQQQQQQHEEASVPQQQQQQHSEQQETAEPDVIVEEEVSEAAAADLA
PSAVSIDNTHISIL*

mRNA from alignment at Contig_127:197810..199567+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_14856 ID=mRNA_14856|Name=jgi.p|Trimin1|352651|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1758bp|location=Sequence derived from alignment at Contig_127:197810..199567+ (Tribonema minus UTEX_B_3156 )
CACGCACGCACAGCAAGCTTGCAAGCAGCCAACCAGCACATCAAAAGAGG
TCAGCATATCCAGTCACCAACCTCGGAAAGTATGGCTCCACTGATGAACA
AGCAATCCGCCCTGGCCGCCTTAGCAGTTCTCGCCCTCGCCAACTCGACA
AGCGCCGCCAACTGCATGCAGCAGCAGCACCACCACCAGCATCAAGTCCA
GCAGCAGCAGCAGCAAAACCAGCAGCAGCAACAGCAGCGTCCTCACCGTC
GCTCGTCCGATGGCCTCTTCTCTCCGAGGTTCCGGCAGTCCGTGTTTCAG
CCCGACGCCACCATCGCTCAGGCAGCGAATGCCGCGGACGCTTTCTTCGG
CACCCTCTTCAACGAGCTCGGCCAGCCTCTGGCGGCGCGGCACCAGCAGC
CGCAGCACATGCCGCCGTACGAGATGTTCAAGTCGCCCAACGCCTACACC
ATCTCGCTGGACCTCCCCGGTTGCTCCATGGACGATGTGATGGTGATGCT
AGAGGAGGGAGGCGAGGTGCTGCGTATTGAGGGCCGCCGCCCCGCCCGTG
GTCTCAGGCCCGAAGGTCCGTTACGCTCACAACAGTCACTTGACGTATGG
TTGCAGAAATGCTCAGTTGTCACCAGTCCTCAACATGTCACCTGACGGCA
TCCACCAACTTGCAGTCATATGCGTGGCAGTGCAATGGGCTTGTCACAAG
CAACCGACTTTGAGGCATGCAATGTGCTTGGTCATGGGTTTCGAAGACTC
GAGCAAGTCAATTTTACTCGCAGCTGCGTCAATGTGAGCAATTCAGTCAT
CATGGTGCAACCTCCATCAGCACATCGCCCGCAGTCATGGTGCAGCCTGT
GTGAACACGCGCTTTGCTTCCTCGTAACAAGCTAGTGCCACCCCTGATCA
GCAGTAAGCATACATAGAAGTACATAAATCAGTGCTGAGACACTCACTAT
CGCCCTACTTCATTACTGCTTGCATCCCCAGGCCCCCTTCTTCGCTGGCG
CTTTGAGGTGAGCAGGGATGTGGACACATCGCTCATCAGCGCGCGCATGT
CGCACGGCACGCTCTCCGTGGAGCTGCCGCTCGTGGCCAAGGCAAAGGCG
CAGAAGATCCACATCAATCCTGATGATGACCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCTTGCCTCAATGCAGCACGGCTCAGCTGCTGCGC
AGCAGTCACCGCTGCCCGCTGGCCAGGAGGAGCAACCCCAGCGGGATGAT
GCTCAGCAGCAGCAGCAGCAGCAGCAACACGAGGAGGCAAGCGTGCCACA
GCAGCAGCAGCAGCAGCACAGCGAGCAGCAAGAGACGGCTGAGCCGGATG
TAATTGTAGAGGAGGAGGTGTCAGAGGCAGCGGCGGCAGATCTGGCGCCG
TCTGCAGTTTCCATCGACAACACGCACATCAGCATCTTGTGAACTGCCCT
CGCGGGCTTCAGGTGCACATAGTAGAAATAGTTGATTTGCATTTGGTAAG
ACGCTGTTGCCTGGGCTGGAGGTGTGATTCAGCATCATGTTAGAGTTAGG
GCTAGGGCTTGCCTTAGACCCTGATCCTAGTTGAAGTTGCTGTGTTGGGC
ATCAGCAGCTCGTGCGACTGTAGGTACACGCGAAAACGCATCTTGTATCA
ACAGTAGTCATGGTGTGCAGTTTTGAGAGAGGCTGGAACCCTGCGCAGCA
CCAAGGACGGAACGCTGCATTTACAATGCAGCCTTGTAAATACATGAGTT
TTTTTTCA

Coding sequence (CDS) from alignment at Contig_127:197810..199567+

>mRNA_14856 ID=mRNA_14856|Name=jgi.p|Trimin1|352651|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=945bp|location=Sequence derived from alignment at Contig_127:197810..199567+ (Tribonema minus UTEX_B_3156 )
ATGGCTCCACTGATGAACAAGCAATCCGCCCTGGCCGCCTTAGCAGTTCT
CGCCCTCGCCAACTCGACAAGCGCCGCCAACTGCATGCAGCAGCAGCACC
ACCACCAGCATCAAGTCCAGCAGCAGCAGCAGCAAAACCAGCAGCAGCAA
CAGCAGCGTCCTCACCGTCGCTCGTCCGATGGCCTCTTCTCTCCGAGGTT
CCGGCAGTCCGTGTTTCAGCCCGACGCCACCATCGCTCAGGCAGCGAATG
CCGCGGACGCTTTCTTCGGCACCCTCTTCAACGAGCTCGGCCAGCCTCTG
GCGGCGCGGCACCAGCAGCCGCAGCACATGCCGCCGTACGAGATGTTCAA
GTCGCCCAACGCCTACACCATCTCGCTGGACCTCCCCGGTTGCTCCATGG
ACGATGTGATGGTGATGCTAGAGGAGGGAGGCGAGGTGCTGCGTATTGAG
GGCCGCCGCCCCGCCCGTGGTCTCAGGCCCGAAGGCCCCCTTCTTCGCTG
GCGCTTTGAGGTGAGCAGGGATGTGGACACATCGCTCATCAGCGCGCGCA
TGTCGCACGGCACGCTCTCCGTGGAGCTGCCGCTCGTGGCCAAGGCAAAG
GCGCAGAAGATCCACATCAATCCTGATGATGACCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCTTGCCTCAATGCAGCACGGCTCAGCTGCTG
CGCAGCAGTCACCGCTGCCCGCTGGCCAGGAGGAGCAACCCCAGCGGGAT
GATGCTCAGCAGCAGCAGCAGCAGCAGCAACACGAGGAGGCAAGCGTGCC
ACAGCAGCAGCAGCAGCAGCACAGCGAGCAGCAAGAGACGGCTGAGCCGG
ATGTAATTGTAGAGGAGGAGGTGTCAGAGGCAGCGGCGGCAGATCTGGCG
CCGTCTGCAGTTTCCATCGACAACACGCACATCAGCATCTTGTGA