Trimin1|352651|estExt_Genemark1.C_Ctg_1270026 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352651
Unique NameTrimin1|352651|estExt_Genemark1.C_Ctg_1270026
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length315
Homology
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A835ZBG3_9STRA (SHSP domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG3_9STRA)

HSP 1 Score: 348 bits (894), Expect = 4.240e-117
Identity = 277/317 (87.38%), Postives = 280/317 (88.33%), Query Frame = 0
Query:    1 MAPLMNKQSALAALAVLALANSTSAANCMQXXXXXXXXXXXXXXXXXXXXXXR---PHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHINPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSEAAAADLAPSAVSIDNTHISIL 314
            MAPLMNKQSALAALA+ ALANS SAANCMQ        XXXXXXXXXXXXXX    PHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPL ARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGL+PEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI+PDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     VSEAAAADLAPSA SIDNTHISIL
Sbjct:    1 MAPLMNKQSALAALAIFALANSASAANCMQQQHPQHQVXXXXXXXXXXXXXXXXXXPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPLVARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLKPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHISPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEPDVIVEEE---------VSEAAAADLAPSAASIDNTHISIL 308          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A835YZU5_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.230e-30
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 0
Query:   67 FRQSVFQPDATIAQAANAADAFFGTLFNE------LGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 206
            F +++    A I QA+ A +AFFG   ++         P AAR   P   P YE+ + P +Y I+++LPGCS DDV + LEEGGE+LRI+G+RPARG +P GP    RFE+++D+D S      ISA M HG L+V LP V K++A KI I
Sbjct:   44 FNRAMSHQHAAITQASKAFEAFFGEALSQNEAVTTAATPAAAR---PHRQPDYEITELPGSYLINIELPGCSTDDVNITLEEGGEILRIDGQRPARGQQPAGPQFSRRFELNKDIDVSRTGPSGISASMVHGVLTVFLPKVRKSEAVKIPI 191          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A835ZGU0_9STRA (SHSP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.000e-17
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0
Query:  126 LDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPLLRWRFEVSRDVDTSL-----ISARMSHGTLSVELPLVAKAKAQKIHI 206
            ++LPGCS DDV + LEEGGEVLRI+G+ PARG +P GP    RF +S+++D S      +SA M+HG L+V LP V K +A K+ +
Sbjct:    1 MELPGCSKDDVAITLEEGGEVLRIDGQCPARGEQPAGPRFSRRFGLSKEIDVSRTGPSGVSASMAHGVLTVFLPKVHKPEALKVPV 86          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A7C5L7W2_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C5L7W2_9DELT)

HSP 1 Score: 59.3 bits (142), Expect = 2.210e-7
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0
Query:  108 QHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR---RPARGLR------PEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 206
            Q +P  E++++P A  +  DLPG   ++V V LE+G  VL I+     +PA G R        G  LR RF +S  +D   ISARM++G L++ELP  A  K + I +
Sbjct:   24 QFVPAVEIYETPEAVVVRADLPGVPRENVKVSLEDG--VLTIDAAMPDQPADGRRMLVQEFERGHYLR-RFTISEAIDQGRISARMTNGVLTLELPKQAPVKPRCIEV 128          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A382ID31_9ZZZZ (SHSP domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A382ID31_9ZZZZ)

HSP 1 Score: 59.7 bits (143), Expect = 2.260e-7
Identity = 44/128 (34.38%), Postives = 63/128 (49.22%), Query Frame = 0
Query:   89 FGTLFNELGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPA----------RGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 206
            FG+LFN+     A   Q     P  ++ +SP+AYT++ DLPG +  DV + +EEG  VL + G R            R  R  G   R  F++   V+T  I A   +G L VELP V  +K  ++ I
Sbjct:   21 FGSLFNDSFGTSAKTTQTDAWSPAVDIVESPDAYTLTADLPGLTKADVNLTVEEG--VLTLTGERKNEQSASNEFGHRHERAYGKFSR-SFQLGSGVETGKIKAEFRNGMLKVELPKVEASKPYEVSI 145          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A1I4VSF2_9NEIS (Molecular chaperone IbpA, HSP20 family n=1 Tax=Formivibrio citricus TaxID=83765 RepID=A0A1I4VSF2_9NEIS)

HSP 1 Score: 55.8 bits (133), Expect = 3.360e-6
Identity = 36/122 (29.51%), Postives = 62/122 (50.82%), Query Frame = 0
Query:   96 LGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEG----------PLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHIN 207
            + Q   A   +   +P  ++ +  +   +  DLPG S + + + +E  G+ L IEG        PEG          P  R  F +S+++DT+ +SA ++HG L + +P VA+A+ QKI +N
Sbjct:    7 VSQAAEASRSEAALIPAVDVIEDASGIVLYADLPGVSKEKLSLQVE--GDTLTIEGEVSIDV--PEGMDASHVEVNLPRYRRSFTLSKELDTTKVSAELNHGVLKLHIPKVAQAQPQKIKVN 124          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: UPI001AB013F8 (Hsp20/alpha crystallin family protein n=1 Tax=Actinomadura barringtoniae TaxID=1427535 RepID=UPI001AB013F8)

HSP 1 Score: 55.8 bits (133), Expect = 5.980e-6
Identity = 42/142 (29.58%), Postives = 70/142 (49.30%), Query Frame = 0
Query:   89 FGTLFNELGQPL---------AARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE-----GGEVLRIEGRRPARGLRPEGPLLRWRFEVSR---------DVDTSLISARMSHGTLSVELPLVAKAKAQKIHIN 207
            F  L++++GQ L          AR   P  +PP ++ +S +AYT+ ++LPG S DD+ + L +     GGE++  E        R +G L R    V R         DV++ ++ AR+  G L++ LP    AK + I ++
Sbjct:   22 FEDLYDQMGQLLNFAFGAPGQEARQDFPW-VPPADISESEDAYTVEIELPGISKDDIDIQLNDRELVVGGEIVEKE--------REKGKLRRKTRRVGRFEFRAILPGDVNSDMVDARLRDGVLTLNLPKAETAKPRHIEVS 154          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A5B9PCR7_9BACT (Spore protein SP21 n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PCR7_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.210e-5
Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = 0
Query:   83 NAADAFFGTLFNELGQPLAARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEE------GGEVLRI--EGRRPARGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 206
            N  D FFG      G  L         +PP  + +S   +++ ++LPG S DDV + ++E      G +V+    EG+R A+  R  G   R +FE +  +D   ISA    G LS+ELP   K   +KI I
Sbjct:   19 NLFDHFFGNQQTSQGCKL---------IPPANVTESDTGFSLVMELPGVSADDVSIEMKENLLVVHGKKVVDKPGEGQRLAKSERRGGAFAR-KFEFASQIDADGISAEFKDGLLSIELPKSEKVLPRKIEI 140          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A846ZVM5_9DELT (Hsp20/alpha crystallin family protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=A0A846ZVM5_9DELT)

HSP 1 Score: 54.3 bits (129), Expect = 1.280e-5
Identity = 34/109 (31.19%), Postives = 62/109 (56.88%), Query Frame = 0
Query:  104 HQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGR----RPARGLRPEGPLLRWR--FEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHI 206
            H++P  +P  +++++P A  + +D+PG   DDV V ++ G   + ++GR    R  R L  E  +  ++  F +S D+D   I+A+M+ G L++ +   AK K +KI I
Sbjct:   21 HERPVFVPAADIWETPEAIVLKMDMPGVGPDDVEVNVQHG--TMTVQGRVATARTERVLYAEQRIGDYQSEFALSEDLDPDTITAQMNAGVLTLTVGKAAKVKPRKIAI 127          
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Match: A0A7C1IFX2_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C1IFX2_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 3.260e-5
Identity = 37/119 (31.09%), Postives = 62/119 (52.10%), Query Frame = 0
Query:  103 RHQQPQHMPPY----EMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIEGRRPARGLRPEGPL--------LRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAKAQKIHINPD 209
            R +QPQ  P +    +++++P+A T+ LD+PG   +DV V ++ G   LRI G+  A    PE  L            F +S D+DT  ++A M+ G L++ +    K K +KI +  +
Sbjct:   16 RREQPQERPVFVPAADIWETPDAITLKLDMPGVGPEDVEVNVQRG--TLRIHGKVNADA--PETVLYAEQRVGDFEREFTLSEDLDTDNVAAAMNAGVLTLTIGKADKVKPRKIAVKAE 130          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352651 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835ZBG3_9STRA4.240e-11787.38SHSP domain-containing protein n=2 Tax=Tribonema m... [more]
A0A835YZU5_9STRA4.230e-3045.70SHSP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835ZGU0_9STRA3.000e-1751.16SHSP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7C5L7W2_9DELT2.210e-737.96Hsp20/alpha crystallin family protein n=1 Tax=Desu... [more]
A0A382ID31_9ZZZZ2.260e-734.38SHSP domain-containing protein n=2 Tax=root TaxID=... [more]
A0A1I4VSF2_9NEIS3.360e-629.51Molecular chaperone IbpA, HSP20 family n=1 Tax=For... [more]
UPI001AB013F85.980e-629.58Hsp20/alpha crystallin family protein n=1 Tax=Acti... [more]
A0A5B9PCR7_9BACT1.210e-532.58Spore protein SP21 n=1 Tax=Mariniblastus fucicola ... [more]
A0A846ZVM5_9DELT1.280e-531.19Hsp20/alpha crystallin family protein n=1 Tax=Smit... [more]
A0A7C1IFX2_9BACT3.260e-531.09Hsp20/alpha crystallin family protein n=1 Tax=Phyc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..66
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 114..194
e-value: 1.12705E-13
score: 63.7272
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 116..206
e-value: 1.1E-6
score: 28.7
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 104..209
score: 16.746616
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 95..227
e-value: 9.1E-16
score: 59.6
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 107..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_127contigContig_127:197891..199251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352651mRNA_14856Tribonema minus UTEX_B_3156 mRNAContig_127 197810..199567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352651|estExt_Genemark1.C_Ctg_1270026 ID=Trimin1|352651|estExt_Genemark1.C_Ctg_1270026|Name=jgi.p|Trimin1|352651|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=315bp
MAPLMNKQSALAALAVLALANSTSAANCMQQQHHHQHQVQQQQQQNQQQQ
QQRPHRRSSDGLFSPRFRQSVFQPDATIAQAANAADAFFGTLFNELGQPL
AARHQQPQHMPPYEMFKSPNAYTISLDLPGCSMDDVMVMLEEGGEVLRIE
GRRPARGLRPEGPLLRWRFEVSRDVDTSLISARMSHGTLSVELPLVAKAK
AQKIHINPDDDQQQQQQQQQQQQLASMQHGSAAAQQSPLPAGQEEQPQRD
DAQQQQQQQQHEEASVPQQQQQQHSEQQETAEPDVIVEEEVSEAAAADLA
PSAVSIDNTHISIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone