Trimin1|13927|CE13926_182 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|13927
Unique NameTrimin1|13927|CE13926_182
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length259
Homology
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A835ZBL5_9STRA (Signal peptidase complex subunit 2 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL5_9STRA)

HSP 1 Score: 498 bits (1282), Expect = 7.210e-178
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query:    1 AWYYSCTGSLLRQAEEGGGSEGGAATCDIGDGGAPASTTIMTKTIAHEEEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAVASAISAETKKRK 258
            AWYYSCTGSLLRQAEEGGGSEGGAATCDIGDGGAPASTTIMTKTIAHEEEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAVASAISAETKKRK
Sbjct:    1 AWYYSCTGSLLRQAEEGGGSEGGAATCDIGDGGAPASTTIMTKTIAHEEEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAVASAISAETKKRK 258          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: K8YV93_NANGC (Signal peptidase complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV93_NANGC)

HSP 1 Score: 159 bits (401), Expect = 9.090e-45
Identity = 87/213 (40.85%), Postives = 125/213 (58.69%), Query Frame = 0
Query:   36 ASTTIMTKTIAHEEEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKP----NNKGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAK 244
            A+  + + T A EEE EP  +DTGD +KVKQ +DEAVV+A++D G+EE+  + N+KL LMV+AC FA +AQ YP PFPESRP+L VCC++YF  S ++Q+++S +EQD IL T+P       G AL++RT FPRFQ+ YT  +E                             G + P   ++K      ++G  FD EG   EEG+  ++ +
Sbjct:    2 AAPQVASSTPADEEE-EPLHIDTGDQMKVKQVLDEAVVKAIVDAGYEENFFYDNIKLALMVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKAGEALKVRTQFPRFQDEYTVFVE---------------------------EAGMQDPPTVSSK-----FSIGKVFDEEGNFYEEGLAREVQR 181          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: W7TQC5_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC5_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.460e-44
Identity = 76/144 (52.78%), Postives = 105/144 (72.92%), Query Frame = 0
Query:   36 ASTTIMTKTIAHEEEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKP----NNKGVALRIRTAFPRFQEIYTTEIE 175
            A+  + + T A EEE EP  +DTGD +KVKQ +DEAVV+A++D G+EE+  + N+KL LMV+AC FA +AQ YP PFPESRP+L VCC++YF  S ++Q+++S +EQD IL T+P       G AL++RT FPRFQ+ YT  +E
Sbjct:    2 AAPQVASSTPADEEE-EPLHIDTGDQMKVKQVLDEAVVKAIVDAGYEENFFYDNIKLALMVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKAGEALKVRTQFPRFQDEYTVFVE 144          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A7S2CUY6_9STRA (Signal peptidase complex subunit 2 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUY6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.210e-38
Identity = 90/216 (41.67%), Postives = 122/216 (56.48%), Query Frame = 0
Query:   51 REPSKVDTGDSLKVKQAMDEAVVRAVMDMG-----------FEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGVA----LRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAVASAIS 251
            REP +V+ GD +KVKQ +DE+ V AV+ +G           ++E+H W NVKLLLMVVACAFA +AQ YP PFPESRP+L +CC +YF  S +LQ +++ IEQD I++T   N+  A    LRIRT FPRFQ  YT  +E    A +K+   +      LIT +              T+DG        +FD EG+  EE V + + K  A   +
Sbjct:   40 REPMQVEIGDFVKVKQMLDESTVSAVLTLGALKVEDGYTYDYDENHYWDNVKLLLMVVACAFAMVAQFYPMPFPESRPLLGICCAAYFVASTVLQGIVTYIEQDTIMLTHAKNRQTAEKEGLRIRTTFPRFQYDYTVVVE---KAETKNGPSVSQTY--LITKYF-------------TEDG--------WFDAEGF--EEDVTKQVQKFEAKKFN 227          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A6H5K7Y7_9PHAE (Signal peptidase complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Y7_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 2.460e-38
Identity = 80/202 (39.60%), Postives = 116/202 (57.43%), Query Frame = 0
Query:   53 PSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNK---GVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAVASAIS 251
            P  V+TGD++K+KQ MD+AV++AV++MG+EEDH  +N KL +M +AC FA  AQ +P+PFPESR +LAVCC SYF CS  L ++++  E+D+IL TK ++    G  + +RT FPRF EIYT  +E                               ++PG    ++   + +VG YFD EG   E G    M  AV + ++
Sbjct:    9 PQSVETGDTVKMKQIMDDAVIKAVLEMGYEEDHTLNNAKLAVMALACVFAVTAQFWPQPFPESRALLAVCCFSYFTCSFGLHLIVTYWEKDLILATKRSSSRSLGKGIFVRTDFPRFDEIYTVSVE------------------------------ERKPGSKPIEE---QWHVGKYFDYEGNFDEWG----MGDAVKNLVT 173          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A7S3M684_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M684_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.160e-38
Identity = 76/203 (37.44%), Postives = 117/203 (57.64%), Query Frame = 0
Query:   49 EEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGVA-LRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAVASAI 250
            EE+EP  ++TGDS+KVKQ +D+A ++A+ + G++ ++ W N+KLLLM ++C FA +AQ +P PFP SRP+LAVCC +YF  S++LQ +++ +++D IL  KP+ +    + IRT+FPRFQE +T                       LI  F      +  P D  T     KM VG YF  +G   E+  + D+ + V   +
Sbjct:   27 EEKEPFTIETGDSVKVKQVLDDAAIKAITEGGYDANYSWDNMKLLLMALSCVFAMVAQFFPIPFPASRPLLAVCCAAYFIISSVLQYIITFVDKDTILFVKPSKECAHDMEIRTSFPRFQEYFT-----------------------LIVQF------KGNPNDKKT---TAKMYVGRYFTEKGAFDEDAFINDVRRHVQKFV 197          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A8J2SMV2_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMV2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.220e-36
Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 0
Query:   43 KTIAHEEEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAVA 247
            K  A E E +   +DTGDSLKVKQ +DEA V+AV+  G++E H   N+K+ LM++AC FA  AQ  P PFP+ RP+L VCC  YF  S + Q+V+  +E+D++LITKP N    LR+RT FP+FQ+++T  +E     A  +  K                                   VG +FD  GY  E G  + + K VA
Sbjct:    7 KPEAAEGEDDYQHIDTGDSLKVKQILDEATVKAVLAKGYDEVHFIDNLKISLMIIACLFACAAQFNPIPFPKVRPILGVCCGGYFVFSGIHQLVVKYVERDIVLITKPKNAEHGLRVRTDFPKFQDLFTIIVEYDTPDAPPYEEK---------------------------------HCVGKFFDTGGYFWEAGFADTVQKMVA 178          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A7S2GQY7_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQY7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 6.720e-36
Identity = 81/199 (40.70%), Postives = 114/199 (57.29%), Query Frame = 0
Query:   49 EEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGVA-LRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAV 246
            +ER+P + + GD +KVKQ +DEAVV+AV D+ + E++ W NVKLLLMV+ACAFA +AQ +P  FP SRP+L VCC +YF  S++LQ++++ IEQD I+ T+      A LRIRT FPRF   Y  ++ V          +  L   P  T+ L +                       YF  +G+  E+   ED+AKAV
Sbjct:   39 DERQPFQCEIGDFVKVKQTLDEAVVKAVQDLDYNENYYWDNVKLLLMVIACAFAMVAQFFPMEFPGSRPLLGVCCAAYFVASSVLQLIVTYIEQDCIMTTEAKGPATAGLRIRTDFPRFS--YDFQLIV----------QRNLPESPTSTTILKVF---------------------KYFTEDGWFDEDSFEEDVAKAV 204          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A7S2GM61_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM61_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.590e-33
Identity = 80/203 (39.41%), Postives = 112/203 (55.17%), Query Frame = 0
Query:   49 EEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNNKGV-----ALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAV 246
            EER+P + + GD +KVKQ +DEAVV+A+  + + E++ W NVK+LLMVVACAFA +AQ +P  FP+SRP+L VCC +YF  S++LQ++ + IE+D I+ T+P   GV      LRIR+ F RFQ  Y   ++              L   P  TS L I                       YF  +G+  E+    D+AKAV
Sbjct:   28 EERQPLQCEVGDFIKVKQTLDEAVVKAIQGIDYNENYYWDNVKILLMVVACAFAMVAQFFPMEFPQSRPLLGVCCAAYFVASSILQLIDTYIEKDCIMTTEPK-AGVDAASSGLRIRSNFARFQYEYELIVQK------------NLPESPASTSILLIY---------------------KYFTEDGWFDEDSFEADVAKAV 196          
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Match: A0A7S3V7R4_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7R4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.990e-32
Identity = 69/158 (43.67%), Postives = 91/158 (57.59%), Query Frame = 0
Query:   43 KTIAHEEEREPSKVDTGDSLKVKQAMDEAVVRAVMD-------------MGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITK------------PNNKGVALRIRTAFPRFQEIYTTEIE 175
            K +  EEE    +VDTGD +K+KQ +DE V    ++             +G  EDH+ SN+KL+LM VACAFA +AQ  P PFP  RP+L VCC  YF+ S +LQ++ + +++D ILITK            PN     LR+RT FPRF E YT  IE
Sbjct:    6 KVVEEEEEVVLLQVDTGDIIKLKQILDETVANTFLEENTLEGHDSRAKNIGLHEDHRLSNIKLILMAVACAFAMVAQFSPLPFPNCRPILGVCCAVYFSLSGVLQLITTFLDKDCILITKALEGKPAVVKNNPNLAKYGLRVRTIFPRFSEFYTVRIE 163          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|13927 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBL5_9STRA7.210e-178100.00Signal peptidase complex subunit 2 (Fragment) n=1 ... [more]
K8YV93_NANGC9.090e-4540.85Signal peptidase complex subunit 2 n=2 Tax=Monodop... [more]
W7TQC5_9STRA1.460e-4452.78Signal peptidase complex subunit 2 n=1 Tax=Nannoch... [more]
A0A7S2CUY6_9STRA2.210e-3841.67Signal peptidase complex subunit 2 n=2 Tax=Florenc... [more]
A0A6H5K7Y7_9PHAE2.460e-3839.60Signal peptidase complex subunit 2 n=2 Tax=Ectocar... [more]
A0A7S3M684_9STRA5.160e-3837.44Signal peptidase complex subunit 2 n=1 Tax=Spumell... [more]
A0A8J2SMV2_9STRA2.220e-3638.54Signal peptidase complex subunit 2 n=1 Tax=Pelagom... [more]
A0A7S2GQY7_9STRA6.720e-3640.70Signal peptidase complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A7S2GM61_9STRA2.590e-3339.41Signal peptidase complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A7S3V7R4_9STRA5.990e-3243.67Signal peptidase complex subunit 2 n=1 Tax=Chaetoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009582Signal peptidase complex subunit 2PFAMPF06703SPC25coord: 64..245
e-value: 2.0E-31
score: 109.0
IPR009582Signal peptidase complex subunit 2PANTHERPTHR13085MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNITcoord: 48..184
NoneNo IPR availablePANTHERPTHR13085:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 2coord: 48..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_125contigContig_125:56259..60095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|13927mRNA_14134Tribonema minus UTEX_B_3156 mRNAContig_125 56174..60095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|13927|CE13926_182 ID=Trimin1|13927|CE13926_182|Name=jgi.p|Trimin1|13927|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp
AWYYSCTGSLLRQAEEGGGSEGGAATCDIGDGGAPASTTIMTKTIAHEEE
REPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACA
FAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKP
NNKGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFL
PISIGRKQPGDAATKDGAVKMNVGNYFDVEGYFDEEGVVEDMAKAVASAI
SAETKKRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009582Spc2/SPCS2