Trimin1|160079|e_gw1.12.35.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|160079
Unique Name	Trimin1\|160079\|e_gw1.12.35.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	132

Homology

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A835ZDM3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM3_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.910e-88
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0

Query:    1 MQRDAPSFGRRVSTAEQSNLQAATTSSVKRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDIQVMAMSSRAEV 131
            MQRDAPSFGRRVSTAEQSNLQAATTSSVKRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDIQVMAMSSRAEV
Sbjct:    1 MQRDAPSFGRRVSTAEQSNLQAATTSSVKRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDIQVMAMSSRAEV 131

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.360e-30
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0

Query:   29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDI 120
            +RGAP +F   L +IL     D+I W  SG  F+I + E F +E+L+++F+H K SSFQRQLNLYGFRKI +GPD GAYAHEHFLRD+PE +
Sbjct:  100 RRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESL 191

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.540e-27
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 0

Query:   29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPE 118
            +RGAP +F   L +IL    EDII W  SG  F+I++ E F   +L+ +F+H K SSFQRQLNLYGFRK+ +G D G+YAHE F+RD+PE
Sbjct:    8 RRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPE 97

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A6V2VRS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VRS5_HETAK)

HSP 1 Score: 112 bits (281), Expect = 4.620e-27
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 0

Query:   30 RGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDIQVM 123
            RGAP +F   L  IL    +D+I WN  GT F I+D +RFS EVL+ +F+HN  SSFQRQ+NLYGF+KISRGP AGA  H+ FLR RP D+ VM
Sbjct:   16 RGAPQVFARKLYQILLTESKDVICWNEPGTAFFIKDMDRFSQEVLMKYFRHNNYSSFQRQMNLYGFKKISRGPFAGANMHQQFLRGRP-DLLVM 108

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 111 bits (277), Expect = 2.110e-26
Identity = 48/98 (48.98%), Postives = 72/98 (73.47%), Query Frame = 0

Query:   29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDIQVMAMS 126
            +RGAP  F   L +IL     D+++WN +G  F +RD +RFS E+L+ +F+H+K +SFQRQLNLYGFRKI+RG DAG+YAH++F + +P+ + ++  S
Sbjct:    8 QRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRS 105

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.070e-25
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDI 120
            KRGAP  F   L ++L+     +++W  +G  F+I D + F +  LV +F+HNK +SFQRQ NLYGFRKI+RGPDAG Y HEHF + R ED+
Sbjct:    2 KRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDL 93

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 3.630e-25
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 0

Query:   29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPEDI 120
            KRGAP  F   L +IL       I+WN +G+ F + D ERFS+++L  +++H+K SSFQRQLNLY FRKI +G DAG YAH  F RDRP+D+
Sbjct:   36 KRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDL 127

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A7S2WU52_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU52_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.310e-25
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 0

Query:   29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPE---DIQVMAMSSRAEV 131
            KRGAP +F   L +IL     D I+W  SGT F+I++ + F   VL+ +F+H K SSFQRQLNLYGFRKIS+G DAGAYAHE F+R +PE    ++ M  SS + V
Sbjct:  162 KRGAPQVFARKLYEILDNEPPDAISWTTSGTSFVIKEMDAFVTCVLMKYFRHQKYSSFQRQLNLYGFRKISKGSDAGAYAHESFIRGQPELLHFVRRMPQSSSSPV 267

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 8.320e-25
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0

Query:   29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRD 115
            +RGAP +F   L +IL     DII+W  +GT F+I++ + F +E+L+ +F+H K SSFQRQLNLYGFRKI +GPD GAYAHE FLRD
Sbjct:   78 RRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRD 164

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BLAST of jgi.p|Trimin1|160079 vs. uniprot
Match: B8CB26_THAPS (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB26_THAPS)

HSP 1 Score: 102 bits (255), Expect = 8.980e-25
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 0

Query:   36 FLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRDRPE 118
            F   L+D+L      +++W P+G  FM+RD ERF  ++L  +F+H KL+SFQRQLNLYGFR+I++GPD GAY HE FLRD+P+
Sbjct:   39 FPRKLMDMLTKEDSAVVSWLPTGDAFMVRDNERFVGDILPRYFRHTKLTSFQRQLNLYGFRRITKGPDQGAYRHEWFLRDQPD 121

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|160079 vs. uniprot

BLAST of jgi.p|Trimin1|160079 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZDM3_9STRA	1.910e-88	100.00	HSF-type DNA-binding-domain-containing protein n=1...	[more]
A0A7S2G7U9_9STRA	1.360e-30	57.61	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2BSE7_9STRA	2.540e-27	54.44	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A6V2VRS5_HETAK	4.620e-27	58.51	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A6V1QFS1_HETAK	2.110e-26	48.98	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A835Z6Z9_9STRA	1.070e-25	51.09	HSF-type DNA-binding-domain-containing protein (Fr...	[more]
A0A6H5KMN3_9PHAE	3.630e-25	53.26	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
A0A7S2WU52_9STRA	5.310e-25	52.83	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2CXJ7_9STRA	8.320e-25	57.47	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
B8CB26_THAPS	8.980e-25	54.22	HSF_DOMAIN domain-containing protein (Fragment) n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 35..58 score: 15.83 coord: 73..85 score: 50.99 coord: 86..98 score: 76.04
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 32..126 e-value: 1.9E-20 score: 83.9
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 36..121 e-value: 3.2E-23 score: 82.1
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 29..126 e-value: 2.1E-25 score: 91.1
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 28..123
None	No IPR available	PANTHER	PTHR10015:SF206	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 28..123
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 35..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_12	contig	Contig_12:1024083..1025356 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160079	mRNA_3796	Tribonema minus UTEX_B_3156	mRNA	Contig_12 1024083..1025356 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|160079|e_gw1.12.35.1 ID=Trimin1|160079|e_gw1.12.35.1|Name=jgi.p|Trimin1|160079|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=132bp
MQRDAPSFGRRVSTAEQSNLQAATTSSVKRGAPALFLSALVDILRGGYED
IIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISR
GPDAGAYAHEHFLRDRPEDIQVMAMSSRAEV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf