mRNA_10629 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|11261
Unique Name	mRNA_10629
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: A0A835ZLQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLQ1_9STRA)

HSP 1 Score: 744 bits (1921), Expect = 6.000e-271
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 2

Query:   11 MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCTRMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLLGKAPHKRVGGTMQGGISVPSEVTYPVVVWN 1150
            MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCTRMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLLGKAPHKRVGGTMQGGISVPSEVTYPVVVWN
Sbjct:    1 MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCTRMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLLGKAPHKRVGGTMQGGISVPSEVTYPVVVWN 380

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BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: A0A6H5KAS4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAS4_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 1.260e-58
Identity = 109/247 (44.13%), Postives = 155/247 (62.75%), Query Frame = 2

Query:  389 EESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWP-DVHSLLGKAPHKRVGGTMQGGISVPSEV 1126
            EE L++RL VA  F  +A L+LL RG+N++A+DF Y+SP TG L+++ FL L +T D AF +    P    VYKDG V+YR  +R   DG LT+GDK   P+    ISDV+LC VSFD+ G++RSYA G++V+     +DP  +  IE ++ +V   + K++SL GQE +IAY K   +I+ ++ ++  LLE+V+   NT GLGGI GLF AVG E+P D+ +L G      + G      S P EV
Sbjct:  127 EEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVVPTELVVYKDGTVTYRRTFRAVHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDMGVVRSYADGLMVEVVHAIEDPDAVAEIEEIKKRVVNQQAKMKSLEGQESSIAYSKCKADIDVMKLDMEALLERVNSAPNTEGLGGIPGLFAAVGAEFPEDLKNLEGTDAEGDIEGMRLASFSYPVEV 373

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BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: A0A7S2SCC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCC1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 9.630e-13
Identity = 82/315 (26.03%), Postives = 135/315 (42.86%), Query Frame = 2

Query:  269 RISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRL-MVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGL---LRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLT----------IGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLA-----GQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPD--------VHSLLG--KAPHKRVGGTMQGGISVPSEV 1126
            ++ H S   +   S+   KA   P   A     +  A L EE  + RL  +A+T+A ++P+++  RG N+++DDF++FSP TG L K++FL L   L T    F +         V+  G+V+     + SF G ++            D + AP     +   E   V+FD+ G +     G+    A+      V   I  +  ++     K++ L        E   ++Q +M+E+  LE EL  L E        G   G   L  A  + +PD        +   L   ++P + V G   GGISVP ++
Sbjct:   56 QMMHGSQEASAWFSDMFPKALDFPEEVAEVLDTTEDAMLPEEIGEARLGAMARTWAMLSPIVITARGPNVLSDDFVFFSPSTGLLEKDKFLRLNARLATLCPDFFNKLERDGEERVHPTGVVTLNYQPKGSFQGAVSEWSWLAKGSEAADHQ-APVKKPLLGHWEAMAVAFDDQGRVLRLVSGLHAHDAEPEARNMVQSTIRDINGQIEKKLAKLKGLRKAHEENAESHPSFQATMKEMTALEEELKVLNENSHQSPTAGSFDGFRALLHAFDVPFPDDLQQCQTAIQGALMDLESPPEEVHGLRIGGISVPYDM 369

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BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: R1EJF5_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EJF5_EMIHU)

HSP 1 Score: 56.6 bits (135), Expect = 2.050e-5
Identity = 35/110 (31.82%), Postives = 55/110 (50.00%), Query Frame = 2

Query:  473 IIADDFMYFSPCTGTLNKEEFLGLLRTTD--RAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAP--NGVTAISDVELCTVSFDEAGLMRSYACGVVVDK 790
            ++ DDF +  P  G L+KEEFL  + + D  + FP  +  PQ +    D L   R  Y     G  T      AP   G + ++  + C+++FD+ GL+  Y  GVV+D+
Sbjct:  108 LLGDDFAFVGPVVGPLSKEEFLKAIGSVDVQKGFPDFS--PQFYGFQVDPLEGNRVWYVARGRGTNTGPFPPFAPVPTGRSLVNPPQACSLTFDDKGLVTKYTIGVVMDR 215

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|11261 vs. uniprot

BLAST of jgi.p|Trimin1|11261 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835ZLQ1_9STRA	6.000e-271	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5KAS4_9PHAE	1.260e-58	44.13	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2SCC1_9STRA	9.630e-13	26.03	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
R1EJF5_EMIHU	2.050e-5	31.82	Uncharacterized protein n=2 Tax=Emiliania huxleyi ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_119	contig	Contig_119:241644..246289 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|11261\|CE11260_175
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2AHTF@1\|root,2S2PD@2759\|Eukaryota
Evalue	3.19e-06
Seed ortholog	2903.EOD26805
Hectar predicted targeting category	chloroplast
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-16_004050.1
TranscriptId	11583
Track	FilteredModels1
ProteinId	11261

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|11261	gene_10629	Tribonema minus UTEX_B_3156	gene	Contig_119 241644..246289 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|11261	Trimin1\|11261\|CE11260_175	Tribonema minus UTEX_B_3156	polypeptide	Contig_119 241654..246262 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10629_1	exon_10629_1	Tribonema minus UTEX_B_3156	exon	Contig_119 241644..241993 +
exon_10629_2	exon_10629_2	Tribonema minus UTEX_B_3156	exon	Contig_119 242336..242586 +
exon_10629_3	exon_10629_3	Tribonema minus UTEX_B_3156	exon	Contig_119 243084..243295 +
exon_10629_4	exon_10629_4	Tribonema minus UTEX_B_3156	exon	Contig_119 244389..244594 +
exon_10629_5	exon_10629_5	Tribonema minus UTEX_B_3156	exon	Contig_119 246129..246289 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_10629	UTR5_10629	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_119 241644..241653 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10629	CDS_10629	Tribonema minus UTEX_B_3156	CDS	Contig_119 241654..241993 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10629	UTR3_10629	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_119 246263..246289 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_119:241644..246289+
coding sequence from alignment at Contig_119:241644..246289+

spliced messenger RNA

>mRNA_10629 ID=mRNA_10629|Name=jgi.p|Trimin1|11261|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1180bp|location=Sequence derived from alignment at Contig_119:241644..246289+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATCCAGTATCATGAGGCTCACGACGTCCCTGGCCGCGCTGGCGGGTGTCT
GCACTGCGACCCATGCCTTCGTGCCCTGCCCCCACTCAGCGGCATGCGGA
GGATCCAGCAAGCGCAGCCTCGCCCGCACTCAGGGCGCAGCCAGACCTCG
CACCTGCACGCGCATGAGCGAAGATGCCGCCGCCGCCAACAACATCATAC
CCAAGATGGAGGAGGGAGACAGCGGCATCAAGATGCAGGTGCTGTCTAGG
CCTACTCCCCCTCCAGACCGCATTAGCCACCAGAGCTTCAGCGACGCCCT
GCAAGAGTCAGAGGCCCTCAGGAAGGCGCAGCTGCCTCCGGCGTACACAG
CCACCGCCACCCACGGGTCCGCCCCGGCCTCCCTGGATGAGGAGTCTCTC
AAGAGACGGCTGATGGTGGCCAAGACCTTCGCGCGCATGGCCCCTCTGAT
CCTGCTCATGCGAGGAGAGAACATTATAGCGGACGACTTCATGTACTTCT
CCCCCTGCACGGGTACTCTCAACAAGGAGGAGTTCCTGGGGCTGTTGCGC
ACCACCGACAGGGCGTTCCCCAGCATGGCCTCGTTCCCTCAGAGCTTCAC
GGTGTACAAAGACGGGCTCGTGTCGTACCGAACGGCGTACCGGACGTCCT
TCGACGGCCCGCTAACGATCGGCGACAAGGAGCTTGCGCCCAATGGCGTG
ACCGCCATCTCGGACGTGGAGCTGTGCACGGTGTCCTTTGACGAGGCGGG
GCTGATGCGCTCGTACGCGTGCGGCGTCGTCGTGGACAAGGCGGACGAGT
ACAAGGACCCAGCCGTGATGGACCGCATCGAGGCCTTGCAGACCAAGGTG
GCGGGCAACAAGATCAAGGTGGAGTCGCTGGCGGGCCAGGAGCACACCAT
TGCGTACCAGAAGAGCATGGAGGAGATCAACCACCTGGAGACGGAGCTCA
CGTTCTTGCTGGAGCAGGTGGACGTGGAGGCAAACACGGGGGGTCTGGGG
GGCATCGCGGGTCTCTTCTTTGCCGTCGGCCTCGAGTGGCCGGACGTTCA
CTCGCTCCTCGGCAAGGCGCCGCACAAGCGCGTCGGCGGCACCATGCAGG
GCGGCATCTCAGTGCCCAGCGAAGTGACGTACCCCGTCGTCGTGTGGAAC
TGAAGAGCAGCAGTGCTCGTACCAGAGGGG

protein sequence of jgi.p|Trimin1|11261

>Trimin1|11261|CE11260_175 ID=Trimin1|11261|CE11260_175|Name=jgi.p|Trimin1|11261|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=381bp
MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCT
RMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQES
EALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLM
RGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYK
DGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMR
SYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQ
KSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLL
GKAPHKRVGGTMQGGISVPSEVTYPVVVWN*

mRNA from alignment at Contig_119:241644..246289+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10629 ID=mRNA_10629|Name=jgi.p|Trimin1|11261|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4646bp|location=Sequence derived from alignment at Contig_119:241644..246289+ (Tribonema minus UTEX_B_3156 )
ATCCAGTATCATGAGGCTCACGACGTCCCTGGCCGCGCTGGCGGGTGTCT
GCACTGCGACCCATGCCTTCGTGCCCTGCCCCCACTCAGCGGCATGCGGA
GGATCCAGCAAGCGCAGCCTCGCCCGCACTCAGGGCGCAGCCAGACCTCG
CACCTGCACGCGCATGAGCGAAGATGCCGCCGCCGCCAACAACATCATAC
CCAAGATGGAGGAGGGAGACAGCGGCATCAAGATGCAGGTGCTGTCTAGG
CCTACTCCCCCTCCAGACCGCATTAGCCACCAGAGCTTCAGCGACGCCCT
GCAAGAGTCAGAGGCCCTCAGGAAGGCGCAGCTGCCTCCGGCGTACACAG
GTGAGGGGCACTTCCACCGCGTGCCAGTGGCCATGGCGCAATGCTCATGA
GACTCTACAGCATCGTTATGCTGACAGCCTGCCCATGGGCGGTCCTGCGG
CTCGATCTTTCATGCTGCTTCAATATTGCGAACATGGGGTCACACATGCG
CACGAGGACGGACTCAGACACAGCGGCGCGGCAGTAGTCAAGCTGCTGGC
AAGCACGCCTACCCCACAATGCGCGTTTAAGCAGCATTTCGAATGTGCCG
CCGACTGCAACTTTGCTCTGGGCAACGGCAGGATTCAATGTGCACATTTG
CACGGGCCCTCACGAGCTCCACTTTTTCGCGTGTATCTGCAGCCACCGCC
ACCCACGGGTCCGCCCCGGCCTCCCTGGATGAGGAGTCTCTCAAGAGACG
GCTGATGGTGGCCAAGACCTTCGCGCGCATGGCCCCTCTGATCCTGCTCA
TGCGAGGAGAGAACATTATAGCGGACGACTTCATGTACTTCTCCCCCTGC
ACGGGTACTCTCAACAAGGAGGAGTTCCTGGGGCTGTTGCGCACCACCGA
CAGGGCGTTCCCCAGCATGGCCTCGTTCCCTCAGAGCTTCACGGTACGCT
CAAACCTCCGGCAAAGTACTGTACCTATCCTAGGCAAGAAGTTGGCAGTT
GGGGTCTCCTACCGTTCTTGTACCACCATTGCACTTGCAGGGTCGTCGTC
ATGAGCGTCAAATGACCGCTAGCATGCCGCAGAGTGGACCTGAGTCTGTG
TATGCTGCCCCGACCATCGGCACACGCTGCGCTGCTGCAATCATTATCAC
ATGCGCAGCCTTTATGCGCAGGTATCACTACTTGGCAAGGTGGCACACAA
GGCGGCTCAACCTGTGTTATGAGACTCAATCAATGCGCAACCACACAGCT
GTGCTCGGCCCGAAGTCGCCATGGTCAGGATCAATTGCGGCTTCAATACA
TGCGCATAGTCGCAGCTGGTAAGCAGCGTACCGCCAAATACATTGCCGCC
AGACATGTACGCCGCAGGTAATTCAATCAATGTTGGGAGGTTGCGCCTGT
CCTCACTGCCACGTGCTTGTCGCCCCCCCCCTTGCACCAGGTGTACAAAG
ACGGGCTCGTGTCGTACCGAACGGCGTACCGGACGTCCTTCGACGGCCCG
CTAACGATCGGCGACAAGGAGCTTGCGCCCAATGGCGTGACCGCCATCTC
GGACGTGGAGCTGTGCACGGTGTCCTTTGACGAGGCGGGGCTGATGCGCT
CGTACGCGTGCGGCGTCGTCGTGGACAAGGCGGACGAGTACAAGGACCCA
GCGTGAGTTGACATCACATATGCTGTGTGAAAGCCTGCGTTGAGATTGTT
GAAGCATATGTTGACGTCGGAGCAATGGCAGTACTCTCGAAGTGTGTGTA
GATACATACGGCGCGCTGCCGTCGAGCTGTTGACACCTCGCACGGTCGTG
CCGTCGACGACGACCAGGAGCTCCGCATGACGTGAATCTGGTGGCACAGT
CAAGCTCACGTAATTGTTTTTTGAAAACTTCACCGCTGCCCCTGTGACGA
GTGTAGCTGAGGCAGTTGCTTAATTATTGGCCGCCATCTGCGTCTAACTT
GCAGGTACGTAGGCAGGTCTGCTTTGCCACAGCATGTGTCATGCCCAAAC
GGGCACAACGCACAGGGGGCAAATTTGAACGCCGCAACATGTTGTATGGA
CAGCGCACATGCGGAATGACAGCCTCACGCCGTAGAGCACACTACAACCC
ACTGGTTGTGTGATGTGCTACATGCAGTGCGCAGCGGCCCACGTATCGAC
GGGTTGCTCTCAGTGCAGCGTGCGGCACGCCCACACTCAGTGGTGGCCAA
TCAAGTACACAAAGACTGAGCACTGCACCGGGCTGCCCTAGCAGCAAGTG
GCTCATTCGCGCTGCCGGGCGTTGCTGCGTGTCCGCTCTCGGCACCCCGT
GTGGTGCGTTATTGGCAGTTGCTTTTTGAAGTACTGCATTCGAGCCCTGC
GCATAAGGTCTGGAGTTTGAGGTGGGCGCCAGGCCCTAACCCTAACCCTA
ACCCCAAGGCTCAAATGCCCTCATGTCGATGCAAATAGCATAGTGTCCCA
CGCCTGATGAGAGCAACAAGCGCGTATAAGGCGGGCATCCGAGCACACGC
AAACGCGCATCGAAGATCAAGTTACTGCACATGGGTACCTCAGTATGAGG
CTGGTGTACTTGCTACACCTCCCTACCGTATGCCATGTCATTGCGCACTT
CCACTGCCAGATGCTCCCCGTCACAACCCTTCTTCAAGTAATTGAAGTAG
GATAATTATATATATGCTGATGTTCTCTCGCGTACAACTCTACTTCAAGT
GATTGAAGTAAGATACTGAAGTATATGCTATGTTCTCTCTGGCAGCGTGA
TGGACCGCATCGAGGCCTTGCAGACCAAGGTGGCGGGCAACAAGATCAAG
GTGGAGTCGCTGGCGGGCCAGGAGCACACCATTGCGTACCAGAAGAGCAT
GGAGGAGATCAACCACCTGGAGACGGAGCTCACGTTCTTGCTGGAGCAGG
TGGACGTGGAGGCAAACACGGGGGGTCTGGGGGGCATCGCGGGTCTCTTC
TGTAAGTCGCTGAGAGCTTGCACTTGAACCACGTTAACTCCCCGTTTCGT
TTTCAATGAAGCTTGTATGTGTATGCACATAATTGAATCACGTCAGCGTG
TGTGTAGACGACGGTGGCGTTCTGGTTGTAGCAATTGGATATGGAGGCGA
ACCTGGTGGTCGCGGGGGCACATTCGGCCATTTCTGCGAGTCGAGAACTG
AAATGCCTCACATTTGAGTAACACCTTGATGCTTCAACTTCAGTGCATGC
TTGAAGGATGGAGACGATGTTGACGTTATCCTTGCATCAAGTGGTGGTGC
AGGCAAACACGGGCATCGCCGGTGTGTTCTTCAGGTCTTGTTGAGATTCA
ACTTGTTACGCTACAAGTTGAACTTGCAGGTGATGTGTTTTTTAAACTAC
TAGATAGTATAGCAAAGTTCAAGTTGAAGATCTTGCTGGAGCAAGTGACA
AGGAGATGATTGGAGGGCCATATGATTCCAAGAAACTGAAACCCTGTTTG
CTGTGCAGTCAGTTTGTGAGAAGGGCATTATCAAGCGGAGGAGTCTGACG
AAGCAGCTCCATGCGCAAGCTGAAAGAAAACATGGTTGGGGTGTGTAGTG
CCTTGGCAGTATACAACTGCAGACATGCCTCAAGTACGACCTCAAGTGCA
ACGGCTCAAACCAAACCTTTTTAGCTGTGCACGTGCACGGTCCATCACTT
CTTGAGCAGCGCTTACAGCATGATGTGGAGGCAAAGCGCAGTCTACGGGA
GCCGAAAAGAGGTCCACATGGGCATTTCACGGCCTTACAACCAACCTCAG
ACACAGCAGTGCCTCAAAGGCAGCACAGGCAACGCAAGCTGAGCGCTCGA
AGAAAGTTACATACTTACGGTGCGGTGAGAGGTGTGCCATGTTCTGCAAC
ACCCTGCCTCTGCTGCTGCAACTAGTCATGTTGCTCAAACTGGCTTAGTC
TCCTGTGCGGTGCAGACAGCCATGTTTATTTAAGTTGGCATACTTTTCTA
CTTGTTTCACGGTGCTAAAAGTCTACAAAGCGTTCACGATTGTTTCACGC
CTGGAGGGGCCGGCTTTGCCCATCAGGTGCTGATCCACATGTTTCTGGCT
CTGAATGTCGATATGAACATCTATTTTTTTTATTTCATTTGAAAGTGCAC
AGTAGAAAAAAATTCCATCTTATGCAGTATAGGCAGCTGCGCCCAGACCA
CCTTTTGATGCGTGTCGTGTTCAACGACAGGGTCACTGTGCGCACACATG
CTCTTCCTCTCTCGCATGTGCCACCAGCGCCATGCGCTAAACATCCACCA
TTCACCAGCGTGGCGCATCCGCTCAGGCGCGCCCATTGCATGGCTGGTCA
ATGCCCGTCAGCCTGCAGTTGCCACACGCGCCCCCGCTTACACTGAACAT
TGGCATCATCAGTACACAGGTAGTTCCTCCCATAATACATAATCGCGCCC
CCGCCCATCACTGGACATCAACATCATCGTCAATCCCTCTAATAGTTTTT
GCCTCCCCGCCTCATTACCGCCTCTTCAAATGCAGTTGCCGTCGGCCTCG
AGTGGCCGGACGTTCACTCGCTCCTCGGCAAGGCGCCGCACAAGCGCGTC
GGCGGCACCATGCAGGGCGGCATCTCAGTGCCCAGCGAAGTGACGTACCC
CGTCGTCGTGTGGAACTGAAGAGCAGCAGTGCTCGTACCAGAGGGG

Coding sequence (CDS) from alignment at Contig_119:241644..246289+

>mRNA_10629 ID=mRNA_10629|Name=jgi.p|Trimin1|11261|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1143bp|location=Sequence derived from alignment at Contig_119:241644..246289+ (Tribonema minus UTEX_B_3156 )
ATGAGGCTCACGACGTCCCTGGCCGCGCTGGCGGGTGTCTGCACTGCGAC
CCATGCCTTCGTGCCCTGCCCCCACTCAGCGGCATGCGGAGGATCCAGCA
AGCGCAGCCTCGCCCGCACTCAGGGCGCAGCCAGACCTCGCACCTGCACG
CGCATGAGCGAAGATGCCGCCGCCGCCAACAACATCATACCCAAGATGGA
GGAGGGAGACAGCGGCATCAAGATGCAGGTGCTGTCTAGGCCTACTCCCC
CTCCAGACCGCATTAGCCACCAGAGCTTCAGCGACGCCCTGCAAGAGTCA
GAGGCCCTCAGGAAGGCGCAGCTGCCTCCGGCGTACACAGCCACCGCCAC
CCACGGGTCCGCCCCGGCCTCCCTGGATGAGGAGTCTCTCAAGAGACGGC
TGATGGTGGCCAAGACCTTCGCGCGCATGGCCCCTCTGATCCTGCTCATG
CGAGGAGAGAACATTATAGCGGACGACTTCATGTACTTCTCCCCCTGCAC
GGGTACTCTCAACAAGGAGGAGTTCCTGGGGCTGTTGCGCACCACCGACA
GGGCGTTCCCCAGCATGGCCTCGTTCCCTCAGAGCTTCACGGTGTACAAA
GACGGGCTCGTGTCGTACCGAACGGCGTACCGGACGTCCTTCGACGGCCC
GCTAACGATCGGCGACAAGGAGCTTGCGCCCAATGGCGTGACCGCCATCT
CGGACGTGGAGCTGTGCACGGTGTCCTTTGACGAGGCGGGGCTGATGCGC
TCGTACGCGTGCGGCGTCGTCGTGGACAAGGCGGACGAGTACAAGGACCC
AGCCGTGATGGACCGCATCGAGGCCTTGCAGACCAAGGTGGCGGGCAACA
AGATCAAGGTGGAGTCGCTGGCGGGCCAGGAGCACACCATTGCGTACCAG
AAGAGCATGGAGGAGATCAACCACCTGGAGACGGAGCTCACGTTCTTGCT
GGAGCAGGTGGACGTGGAGGCAAACACGGGGGGTCTGGGGGGCATCGCGG
GTCTCTTCTTTGCCGTCGGCCTCGAGTGGCCGGACGTTCACTCGCTCCTC
GGCAAGGCGCCGCACAAGCGCGTCGGCGGCACCATGCAGGGCGGCATCTC
AGTGCCCAGCGAAGTGACGTACCCCGTCGTCGTGTGGAACTGA