Trimin1|11261|CE11260_175 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|11261
Unique NameTrimin1|11261|CE11260_175
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length381
Homology
BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: A0A835ZLQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLQ1_9STRA)

HSP 1 Score: 744 bits (1921), Expect = 3.700e-271
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0
Query:    1 MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCTRMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLLGKAPHKRVGGTMQGGISVPSEVTYPVVVWN 380
            MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCTRMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLLGKAPHKRVGGTMQGGISVPSEVTYPVVVWN
Sbjct:    1 MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCTRMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLLGKAPHKRVGGTMQGGISVPSEVTYPVVVWN 380          
BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: A0A6H5KAS4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAS4_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 8.960e-59
Identity = 109/247 (44.13%), Postives = 155/247 (62.75%), Query Frame = 0
Query:  127 EESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWP-DVHSLLGKAPHKRVGGTMQGGISVPSEV 372
            EE L++RL VA  F  +A L+LL RG+N++A+DF Y+SP TG L+++ FL L +T D AF +    P    VYKDG V+YR  +R   DG LT+GDK   P+    ISDV+LC VSFD+ G++RSYA G++V+     +DP  +  IE ++ +V   + K++SL GQE +IAY K   +I+ ++ ++  LLE+V+   NT GLGGI GLF AVG E+P D+ +L G      + G      S P EV
Sbjct:  127 EEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVVPTELVVYKDGTVTYRRTFRAVHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDMGVVRSYADGLMVEVVHAIEDPDAVAEIEEIKKRVVNQQAKMKSLEGQESSIAYSKCKADIDVMKLDMEALLERVNSAPNTEGLGGIPGLFAAVGAEFPEDLKNLEGTDAEGDIEGMRLASFSYPVEV 373          
BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: A0A7S2SCC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCC1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 8.680e-13
Identity = 82/315 (26.03%), Postives = 135/315 (42.86%), Query Frame = 0
Query:   87 RISHQSFSDALQESEALRKAQLPPAYTATATHGSAPASLDEESLKRRL-MVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGL---LRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLT----------IGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLA-----GQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPD--------VHSLLG--KAPHKRVGGTMQGGISVPSEV 372
            ++ H S   +   S+   KA   P   A     +  A L EE  + RL  +A+T+A ++P+++  RG N+++DDF++FSP TG L K++FL L   L T    F +         V+  G+V+     + SF G ++            D + AP     +   E   V+FD+ G +     G+    A+      V   I  +  ++     K++ L        E   ++Q +M+E+  LE EL  L E        G   G   L  A  + +PD        +   L   ++P + V G   GGISVP ++
Sbjct:   56 QMMHGSQEASAWFSDMFPKALDFPEEVAEVLDTTEDAMLPEEIGEARLGAMARTWAMLSPIVITARGPNVLSDDFVFFSPSTGLLEKDKFLRLNARLATLCPDFFNKLERDGEERVHPTGVVTLNYQPKGSFQGAVSEWSWLAKGSEAADHQ-APVKKPLLGHWEAMAVAFDDQGRVLRLVSGLHAHDAEPEARNMVQSTIRDINGQIEKKLAKLKGLRKAHEENAESHPSFQATMKEMTALEEELKVLNENSHQSPTAGSFDGFRALLHAFDVPFPDDLQQCQTAIQGALMDLESPPEEVHGLRIGGISVPYDM 369          
BLAST of jgi.p|Trimin1|11261 vs. uniprot
Match: R1EJF5_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EJF5_EMIHU)

HSP 1 Score: 56.6 bits (135), Expect = 1.940e-5
Identity = 35/110 (31.82%), Postives = 55/110 (50.00%), Query Frame = 0
Query:  155 IIADDFMYFSPCTGTLNKEEFLGLLRTTD--RAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAP--NGVTAISDVELCTVSFDEAGLMRSYACGVVVDK 260
            ++ DDF +  P  G L+KEEFL  + + D  + FP  +  PQ +    D L   R  Y     G  T      AP   G + ++  + C+++FD+ GL+  Y  GVV+D+
Sbjct:  108 LLGDDFAFVGPVVGPLSKEEFLKAIGSVDVQKGFPDFS--PQFYGFQVDPLEGNRVWYVARGRGTNTGPFPPFAPVPTGRSLVNPPQACSLTFDDKGLVTKYTIGVVMDR 215          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|11261 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZLQ1_9STRA3.700e-271100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KAS4_9PHAE8.960e-5944.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SCC1_9STRA8.680e-1326.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R1EJF5_EMIHU1.940e-531.82Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_119contigContig_119:241654..246262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|11261mRNA_10629Tribonema minus UTEX_B_3156 mRNAContig_119 241644..246289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|11261|CE11260_175 ID=Trimin1|11261|CE11260_175|Name=jgi.p|Trimin1|11261|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=381bp
MRLTTSLAALAGVCTATHAFVPCPHSAACGGSSKRSLARTQGAARPRTCT
RMSEDAAAANNIIPKMEEGDSGIKMQVLSRPTPPPDRISHQSFSDALQES
EALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLM
RGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYK
DGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMR
SYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQ
KSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWPDVHSLL
GKAPHKRVGGTMQGGISVPSEVTYPVVVWN*
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