Trimin1|11258|CE11257_72 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|11258
Unique NameTrimin1|11258|CE11257_72
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length160
Homology
BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A835ZB45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB45_9STRA)

HSP 1 Score: 333 bits (854), Expect = 6.690e-116
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query:    1 MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFKLQA 159
            MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFKLQA
Sbjct:    1 MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFKLQA 159          
BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A7S1D5T7_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5T7_CYCTE)

HSP 1 Score: 87.4 bits (215), Expect = 1.180e-18
Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = 0
Query:   18 ETWPEGSVNVNHWEVPTYMVQMSV--FLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVE--PHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEG 145
            E W EGS  VNHWE PTYMV++     ++++ ++ +QPI EAW GQPL P  +   R ++ ++++A HV+  P   SA+ + V  +    E WPL +   DG    +    G+MI+ +S  V+ GRP PL+G
Sbjct:   49 ERWSEGSTFVNHWEAPTYMVELKGGNAMKQKIISHVQPILEAWSGQPLVPTSLYGIRIYQGDAMLAPHVDRLPLVTSAI-INVAQDVD--EPWPLELIGHDGWAVNVTIEPGEMILYESHSVLHGRPFPLQG 177          
BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A7R9UF35_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF35_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.960e-16
Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 0
Query:   18 ETWPEGSVNVNHWEVPTYMVQMSVF------------LQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVE--PHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFK 156
            E WP+G++ VNHWEVPTYMV +               L+KR     +PI E W G+ L    +   R +   +++A+H +  P   SA+   + V+    E WPL +    G+   +  A GDM++ +S   V GRP PL+G  ++    HF+
Sbjct:  192 EEWPKGNIYVNHWEVPTYMVNLEDHSEDPKGSLTGWQLKKRIWDGTKPIIEKWTGKELKSTSLYGIRVYHNGAILASHCDRLPLVSSAI---INVDQDVDEPWPLEIYDHSGKAHNVTMAPGDMVLYESHVCVHGRPFPLKGRYYANLFVHFE 341          
BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A7S1YWR3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWR3_TRICV)

HSP 1 Score: 81.3 bits (199), Expect = 7.390e-16
Identity = 52/164 (31.71%), Postives = 82/164 (50.00%), Query Frame = 0
Query:    3 LLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMS--------VFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVE--PHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFK 156
            LL   ++A  +S + E W EG   +NHW++PT MV +           L+ +     +   + W G+PL+   V   R +RR +V+A HV+  P   SA+   + V+      WPL V   DG    +    GDM++ +S  VV GRP PL+G+ ++    HF+
Sbjct:   51 LLRAFWRANRNSRLTEAWSEGDTYLNHWDMPTQMVNVDNPRLSGGGKELEWKIWDATREAIQEWIGKPLSTSSVYGIRIYRRGAVLAPHVDRLPLVSSAI---INVDQDVNAPWPLEVIAHDGVAYNVTMEPGDMVLYESHSVVHGRPYPLQGSFYANVFVHFE 211          
BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A448Z4T5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4T5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.650e-13
Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = 0
Query:    1 MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMS------VFLQKRTLAVL---QPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPL--EGAMHSEFEAHFK 156
            M LL   ++     +  E W EG+  VNHWEVPT ++ +        F ++    ++   Q + E+W GQ L        R ++  +++A HV+     + A+  V +    E W L V   DG+   + A  G+MI+ +S  V+ GRP PL  EGA +     HF+
Sbjct:  162 MELLQSFFEKNERYVWPEFWNEGNTYVNHWEVPTGLLDIGRESLPHPFAREERETIIRSIQDVLESWTGQRLVLTSAYGIRVYQEGAILAPHVDRLPLVSSAIINVFQKNVAEPWVLEVIGHDGKAHNLTAEPGEMILYESASVIHGRPYPLRGEGAKYGSVFVHFE 328          
BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A1E7F5N7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5N7_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.010e-10
Identity = 47/167 (28.14%), Postives = 76/167 (45.51%), Query Frame = 0
Query:    1 MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQM------SVFLQKRTLAVL---QPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPL--EGAMHSEFEAHFK 156
            + LL + +      +  E W +G+  VNHWEVPT ++ +      S F +     ++   Q + E+W  Q L        R +   S++A HV+     + A+  V +    E W L V   DG    + +  G++I+ +S  V+ GRP PL  EGA       HF+
Sbjct:  156 LQLLTKFWDTNKRLVWPEFWDDGNTYVNHWEVPTMLLDIGRKDLFSAFTKDEYEIIIKSVQDLLESWTNQRLVLTSAYGIRLYNEGSILAPHVDRLPLVSSAIINVFQHNLTEPWMLEVIGHDGIAQNLTSKPGEIILYESASVIHGRPYPLKGEGAQCGSLFVHFE 322          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|11258 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835ZB45_9STRA6.690e-116100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1D5T7_CYCTE1.180e-1838.64Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7R9UF35_9STRA1.960e-1632.68Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1YWR3_TRICV7.390e-1631.71Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A448Z4T5_9STRA4.650e-1329.94Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7F5N7_9STRA3.010e-1028.14Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_119contigContig_119:238499..240605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|11258mRNA_10628Tribonema minus UTEX_B_3156 mRNAContig_119 237330..240643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|11258|CE11257_72 ID=Trimin1|11258|CE11257_72|Name=jgi.p|Trimin1|11258|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAV
LQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVEC
RSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSE
FEAHFKLQA*
back to top