mRNA_10628 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|11258
Unique Name	mRNA_10628
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A835ZB45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB45_9STRA)

HSP 1 Score: 332 bits (851), Expect = 1.680e-113
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 3

Query:   39 MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFKLQA 515
            MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFKLQA
Sbjct:    1 MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFKLQA 159

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BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A835ZDT5_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.060e-31
Identity = 78/90 (86.67%), Postives = 78/90 (86.67%), Query Frame = -3

Query:  551 KGGAAAGATAQGAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAXXXXXRPGVRRAAA 820
            KGGAA       AAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAA     RPGVRRAAA
Sbjct:  337 KGGAAXXXXXXXAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAAPAAARPGVRRAAA 426

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BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A7S1D5T7_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5T7_CYCTE)

HSP 1 Score: 96.3 bits (238), Expect = 8.960e-21
Identity = 59/160 (36.88%), Postives = 88/160 (55.00%), Query Frame = 3

Query:    6 GCVKVPAPRALMPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSV--FLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVE--PHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEG 473
            G  K  APRAL   L   ++        E W EGS  VNHWE PTYMV++     ++++ ++ +QPI EAW GQPL P  +   R ++ ++++A HV+  P   SA+ + V  +    E WPL +   DG    +    G+MI+ +S  V+ GRP PL+G
Sbjct:   21 GYAKEKAPRALFEQLKAFFEEHRQQQQLERWSEGSTFVNHWEAPTYMVELKGGNAMKQKIISHVQPILEAWSGQPLVPTSLYGIRIYQGDAMLAPHVDRLPLVTSAI-INVAQDVD--EPWPLELIGHDGWAVNVTIEPGEMILYESHSVLHGRPFPLQG 177

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BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A7S1YWR3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWR3_TRICV)

HSP 1 Score: 88.6 bits (218), Expect = 2.080e-17
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 3

Query:    3 LGCVKVPAPRALMPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMS--------VFLQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVE--PHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFK 506
            LG  KV AP  +  LL   ++A  +S + E W EG   +NHW++PT MV +           L+ +     +   + W G+PL+   V   R +RR +V+A HV+  P   SA+   + V+      WPL V   DG    +    GDM++ +S  VV GRP PL+G+ ++    HF+
Sbjct:   37 LGFRKVRAPEKVYRLLRAFWRANRNSRLTEAWSEGDTYLNHWDMPTQMVNVDNPRLSGGGKELEWKIWDATREAIQEWIGKPLSTSSVYGIRIYRRGAVLAPHVDRLPLVSSAI---INVDQDVNAPWPLEVIAHDGVAYNVTMEPGDMVLYESHSVVHGRPYPLQGSFYANVFVHFE 211

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BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A7R9UF35_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF35_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.170e-15
Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 3

Query:   90 ETWPEGSVNVNHWEVPTYMVQMSVF------------LQKRTLAVLQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVE--PHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSEFEAHFK 506
            E WP+G++ VNHWEVPTYMV +               L+KR     +PI E W G+ L    +   R +   +++A+H +  P   SA+   + V+    E WPL +    G+   +  A GDM++ +S   V GRP PL+G  ++    HF+
Sbjct:  192 EEWPKGNIYVNHWEVPTYMVNLEDHSEDPKGSLTGWQLKKRIWDGTKPIIEKWTGKELKSTSLYGIRVYHNGAILASHCDRLPLVSSAI---INVDQDVDEPWPLEIYDHSGKAHNVTMAPGDMVLYESHVCVHGRPFPLKGRYYANLFVHFE 341

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BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A448Z4T5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4T5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.670e-14
Identity = 55/178 (30.90%), Postives = 85/178 (47.75%), Query Frame = 3

Query:    6 GCVKVPAPRALMPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMS------VFLQKRTLAVL---QPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPL--EGAMHSEFEAHFK 506
            G  KV  PR  M LL   ++     +  E W EG+  VNHWEVPT ++ +        F ++    ++   Q + E+W GQ L        R ++  +++A HV+     + A+  V +    E W L V   DG+   + A  G+MI+ +S  V+ GRP PL  EGA +     HF+
Sbjct:  151 GYAKVHTPRKAMELLQSFFEKNERYVWPEFWNEGNTYVNHWEVPTGLLDIGRESLPHPFAREERETIIRSIQDVLESWTGQRLVLTSAYGIRVYQEGAILAPHVDRLPLVSSAIINVFQKNVAEPWVLEVIGHDGKAHNLTAEPGEMILYESASVIHGRPYPLRGEGAKYGSVFVHFE 328

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BLAST of jgi.p|Trimin1|11258 vs. uniprot
Match: A0A1E7F5N7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5N7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 9.080e-12
Identity = 52/178 (29.21%), Postives = 82/178 (46.07%), Query Frame = 3

Query:    6 GCVKVPAPRALMPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQM------SVFLQKRTLAVL---QPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVECRSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPL--EGAMHSEFEAHFK 506
            G  KV AP  ++ LL + +      +  E W +G+  VNHWEVPT ++ +      S F +     ++   Q + E+W  Q L        R +   S++A HV+     + A+  V +    E W L V   DG    + +  G++I+ +S  V+ GRP PL  EGA       HF+
Sbjct:  145 GYAKVDAPSNVLQLLTKFWDTNKRLVWPEFWDDGNTYVNHWEVPTMLLDIGRKDLFSAFTKDEYEIIIKSVQDLLESWTNQRLVLTSAYGIRLYNEGSILAPHVDRLPLVSSAIINVFQHNLTEPWMLEVIGHDGIAQNLTSKPGEIILYESASVIHGRPYPLKGEGAQCGSLFVHFE 322

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|11258 vs. uniprot

BLAST of jgi.p|Trimin1|11258 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
A0A835ZB45_9STRA	1.680e-113	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZDT5_9STRA	1.060e-31	86.67	Pseudouridine synthase n=1 Tax=Tribonema minus Tax...	[more]
A0A7S1D5T7_CYCTE	8.960e-21	36.88	Hypothetical protein (Fragment) n=1 Tax=Cyclophora...	[more]
A0A7S1YWR3_TRICV	2.080e-17	32.58	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A7R9UF35_9STRA	3.170e-15	32.68	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A448Z4T5_9STRA	1.670e-14	30.90	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A1E7F5N7_9STRA	9.080e-12	29.21	Uncharacterized protein n=1 Tax=Fragilariopsis cyl...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_119	contig	Contig_119:237330..240643 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|11258\|CE11257_72
Description	Ankyrin repeat
COG category	S
Max annot lvl	2836\|Bacillariophyta
EggNOG OGs	2D1TV@1\|root,2SJ8N@2759\|Eukaryota,2XE7J@2836\|Bacillariophyta
Evalue	1.03e-14
Seed ortholog	2850.Phatr50055
Hectar predicted targeting category	other localisation
TranscriptId	11580
Track	FilteredModels1
ProteinId	11258

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|11258	gene_10628	Tribonema minus UTEX_B_3156	gene	Contig_119 237330..240643 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|11258	Trimin1\|11258\|CE11257_72	Tribonema minus UTEX_B_3156	polypeptide	Contig_119 238499..240605 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10628_5	exon_10628_5	Tribonema minus UTEX_B_3156	exon	Contig_119 237330..237614 -
exon_10628_4	exon_10628_4	Tribonema minus UTEX_B_3156	exon	Contig_119 238480..238621 -
exon_10628_3	exon_10628_3	Tribonema minus UTEX_B_3156	exon	Contig_119 239087..239210 -
exon_10628_2	exon_10628_2	Tribonema minus UTEX_B_3156	exon	Contig_119 239803..239862 -
exon_10628_1	exon_10628_1	Tribonema minus UTEX_B_3156	exon	Contig_119 240433..240643 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10628	UTR3_10628	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_119 238480..238498 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10628	CDS_10628	Tribonema minus UTEX_B_3156	CDS	Contig_119 240433..240605 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_10628	UTR5_10628	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_119 240606..240643 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_119:237330..240643-
coding sequence from alignment at Contig_119:237330..240643-

spliced messenger RNA

>mRNA_10628 ID=mRNA_10628|Name=jgi.p|Trimin1|11258|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=822bp|location=Sequence derived from alignment at Contig_119:237330..240643- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AGCTCGGCTGCGTAAAGGTACCAGCGCCGCGTGCGCTCATGCCCCTGCTC
AACGAGGACTACCAGGCTGTGAGCCACTCCATGGTGCAGGAGACGTGGCC
GGAAGGCAGCGTCAATGTCAACCACTGGGAGGTCCCGACGTACATGGTGC
AGATGTCGGTGTTCCTCCAGAAACGGACGCTCGCGGTGCTGCAGCCCATT
GCAGAGGCCTGGTACGGCCAGCCGCTGGCGCCACTCGAGGTGCGGCCGAC
GAGATCGTTCCGCCGCAACAGCGTCGTCGCCAACCACGTGGAGCCGCACG
AAGACAGCGCCGTGGCCGTCAAGGTGGTGGTGGAGTGCCGCAGCTGCGAG
CGGTGGCCGCTGTTCGTCGGGAGGCCTGACGGGGAAGTTGACGCGATGTA
CGCCGCGTATGGCGACATGATCATGTGCGACAGTCTGTGCGTCGTGCAGG
GGCGCCCCCTGCCGCTGGAGGGGGCCATGCACTCCGAGTTTGAGGCGCAC
TTCAAACTGCAAGCGTGATGATTCAGGGTCTCAGGCGGCCTCGCCGGCGC
CGCCGCCGCGCGCCTGACGCCAGGCCTTGCTGCCGCCGGCGCCGCCGCCG
CCGGCGCGCGGCGCCGCTGCCGCGCGTCCCTCGCCTTCGCGCGCAGCTTC
CACGCGAGCACCTTGTTGGCCTTCTTGCGCTTGCGCGCCTCGCGCACGGG
CTCCTCGGCGTCCGCCTTGGGCGCGCGCACCGTCACGCCGCCGCCGCGGC
CGCGCTTCACGCGCACGCCCCACTTCGCCGCCGCCCCCTGCGCCGTTGCC
CCCGCCGCCGCGCCCCCCTTCG

protein sequence of jgi.p|Trimin1|11258

>Trimin1|11258|CE11257_72 ID=Trimin1|11258|CE11257_72|Name=jgi.p|Trimin1|11258|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
MPLLNEDYQAVSHSMVQETWPEGSVNVNHWEVPTYMVQMSVFLQKRTLAV
LQPIAEAWYGQPLAPLEVRPTRSFRRNSVVANHVEPHEDSAVAVKVVVEC
RSCERWPLFVGRPDGEVDAMYAAYGDMIMCDSLCVVQGRPLPLEGAMHSE
FEAHFKLQA*

mRNA from alignment at Contig_119:237330..240643-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10628 ID=mRNA_10628|Name=jgi.p|Trimin1|11258|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3314bp|location=Sequence derived from alignment at Contig_119:237330..240643- (Tribonema minus UTEX_B_3156 )
AGCTCGGCTGCGTAAAGGTACCAGCGCCGCGTGCGCTCATGCCCCTGCTC
AACGAGGACTACCAGGCTGTGAGCCACTCCATGGTGCAGGAGACGTGGCC
GGAAGGCAGCGTCAATGTCAACCACTGGGAGGTCCCGACGTACATGGTGC
AGATGTCGGTGTTCCTCCAGAAACGGACGCTCGCGGTGCTGCAGCCCATT
GCAGAGGCCTGGTGAGTGCGCGGCATTTGTTTTGTGGGTGTCGCGCGTGC
TTGCTGCGAGGTGTGACGCGGTCCCCCGCAATCACTGCTGGTGGCCTTGC
CATTGATGTAAACGACTCTGAATGTCTAGTAATACATTGTCTACGCACGT
GGATATGCGCATGATACACAGCAAAGCCATTGCGCGGCTGCATCCTGTTT
GGTGATGGACGCCACACTGAAATCCCCCACCAATCGCTGCAGGAAGTGCT
AGCAGCCGTAGCAGCGAGATTTTTGAAGTCTGATGGGCAGATAATCCACA
AGCACACCATATAGTATATGTGGTCACCCATGTCATGAGAGTGCGGCAGT
GCAATGCAAGCGCAAGTTCAGGGCTGACTGCTGGCATTACTGGCCAACCT
CATGACCACACACGTCATAACGCCAATAAGATGTTAAGAGAGCTGCTGGT
GTGCAAAGCAGCCCTTGAGGGCAGCTCCATGCACCTCGAGCATCACTCAT
TGCCGTGCAGACACGGCTTCACACCGATGTCAAGCAAGGGCCCCTGCTAA
CGTTCTGCACGCGGATTGGTGCTCGATGCAGGTACGGCCAGCCGCTGGCG
CCACTCGAGGTGCGGCCGACGAGATCGTTCCGCCGCAACAGGTGCGCCAC
AAAACTGTCAACACGTCTCCAACTGTTCCAGCATGAGAGGCTGCCGCAAG
ACAACGCGTGAATGCCACAGTAATGGTGAGGCTGGCAGCAGCCCGACCTT
GTATGCAGGGGCCGCAAACGCCACCGCCGTCGCTGCGCTGGTGGCCTTAT
TAGTAACAGTCTCGCCGCGCCTCAACACTGAGCTTCGATGCGCAGCTGAA
CACCCCACCTTGAGCTCACCTCCTATGGCAGCGCGCAGCTGGAGTGAGCA
CAAACGGCCCCAGGTCGCACTTATTTTCATGCATCTGGGAGGTCTAGTAG
CTGGGCCACGCCGCATTGGCACTCGGGATTTGTGCGATGGCATCAGCGGG
AATGGCAGCTGGCCGCTGCTGCCATCCGTGATTTGCACAAATCGCTACGC
CCCTTTATGTGCCCATGTGCCGTCAGCCATCACGACGCCGCTCCGTCGAG
TTGAGCGTTGAGGCGTCTACGTCGTCTGCCTCGTCTTGGCAGGCCAGACC
CGCTGGCACTTGCGCGCGTCACAGCGTTTGCGCAGCGCACACTGACTGGA
AGCCACCGTGCATGGCCATGTGTCCGCACGCAGCGTCGTCGCCAACCACG
TGGAGCCGCACGAAGACAGCGCCGTGGCCGTCAAGGTGGTGGTGGAGTGC
CGCAGCTGCGAGCGGTGGCCGCTGTTCGTCGGGAGGCCTGACGGGGAAGT
TGACGCGGTGAGTTCAACTCCAACATGGGGGCCACCGCAGCGCGGCGCCG
CCCTCTCAGGTCGCGCGTGCTCGGAAGTCGGCGATTTCAATGAGCATGTC
ATGCTCATGCGCGCGGGCTGGGGGAAGCGGTCACAGGCAGTCCACGGCAA
AGAGTAGCACGACGCGTAGCATGAACAGGCATGCAAGGTGTGCTCACAGT
GCCTGCTTGTCCCAGAAAATCTTAGCTGTGTGAGCCTCTTTGTTGCAAAG
CACAGCGACAAAAACACTCCACAATGCACCGTGCTTGCAAGATTTGAGAT
CTGCTGTGTTTGAAAGAGTTGACGTCTGCACTGCAGTATCCATCAATCTA
TACATACTCCGGTTTTTGCATGAATAAACTCAGCAATGGCCTCACTTCAC
GGGCCATCCAACTTGCCGTTCATGATGTGACGCTCCTCACCTGCACCTGC
TCACGACTCCGTGCGCGCGCAGATGTACGCCGCGTATGGCGACATGATCA
TGTGCGACAGTCTGTGCGTCGTGCAGGGGCGCCCCCTGCCGCTGGAGGGG
GCCATGCACTCCGAGTTTGAGGCGCACTTCAAACTGCAAGCGTGATGATT
CAGGGTCTCAGGCGGTGCGACAGCGGAGGGACCACTGTACACAGCGTACT
ACACCGCACACACACTTGCGTACGTAGGCAAGCAAGGGGCTTGGGAAGTT
CCAGACCCCCTTGGCACAAGTGACGTATGGCACAAGATGATATCACGACT
TCTTTCATACTGTGTCCCAAGTATCTCGCGTGTGTCAGTGCGCTGCCCTA
ATGCACTGCTTTCATGTCTCATATGTATGCATGGGGTGCTCATGCTGGAT
TACATACGGCAGCTGGAGGGACATGTGCCCTCGTGAAACTTCATGCTCAT
TGGTGACTTTACGCTGTTGATCGCAACACCAGTTACAAAGTACATCACTA
ACAAAGCGAGACACATTCACTGGTAGCAACTGCCATCGTGGTCATGCGTC
TATGGGGTGCTTGGGCAGACGCACTTTCAAGCGCACCGATACAAGATTCC
CTCTCGCACGGTGAAGTCTTACGCTGCGCCGCCTCATGCTACATGATAAC
ACGGAGTGATCAGATCTCGTGCGCCCGGTGCACGATTGAGGATGATCGCC
ATGCAACTCCAGGCTTTGCAGCTGCTGCGCTAATCCCCGTAGGAAATCTC
CGCTCAGGCCAGATACATTGCGCTCCTGGTGCGTTTCCCAGGCATCATCA
TGCCGGTACGCAGGCAACACAGCCAAAAATACACCAGATTCATCCTGCAC
ACAGCCGGAACGTTCTGTATTCAACTCCGACACGCGACGCGACGCAGCGT
CTCATTGGCGGCAGCCGGCGCCGCTCTGCGCCTTTGACCGCGACCCCCCC
CGCTTGACGCCAGCCCCCGCCGTCGCAGCGCGCCTGACGCCGCCGCCCCT
TGCCGCCGACGCTGCGCGCCTGCTGCCAGGCCTCGCCGGCGCCGCCGCCG
CGCGCCTGACGCCAGGCCTTGCTGCCGCCGGCGCCGCCGCCGCCGGCGCG
CGGCGCCGCTGCCGCGCGTCCCTCGCCTTCGCGCGCAGCTTCCACGCGAG
CACCTTGTTGGCCTTCTTGCGCTTGCGCGCCTCGCGCACGGGCTCCTCGG
CGTCCGCCTTGGGCGCGCGCACCGTCACGCCGCCGCCGCGGCCGCGCTTC
ACGCGCACGCCCCACTTCGCCGCCGCCCCCTGCGCCGTTGCCCCCGCCGC
CGCGCCCCCCTTCG

Coding sequence (CDS) from alignment at Contig_119:237330..240643-

>mRNA_10628 ID=mRNA_10628|Name=jgi.p|Trimin1|11258|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=480bp|location=Sequence derived from alignment at Contig_119:237330..240643- (Tribonema minus UTEX_B_3156 )
ATGCCCCTGCTCAACGAGGACTACCAGGCTGTGAGCCACTCCATGGTGCA
GGAGACGTGGCCGGAAGGCAGCGTCAATGTCAACCACTGGGAGGTCCCGA
CGTACATGGTGCAGATGTCGGTGTTCCTCCAGAAACGGACGCTCGCGGTG
CTGCAGCCCATTGCAGAGGCCTGGTACGGCCAGCCGCTGGCGCCACTCGA
GGTGCGGCCGACGAGATCGTTCCGCCGCAACAGCGTCGTCGCCAACCACG
TGGAGCCGCACGAAGACAGCGCCGTGGCCGTCAAGGTGGTGGTGGAGTGC
CGCAGCTGCGAGCGGTGGCCGCTGTTCGTCGGGAGGCCTGACGGGGAAGT
TGACGCGATGTACGCCGCGTATGGCGACATGATCATGTGCGACAGTCTGT
GCGTCGTGCAGGGGCGCCCCCTGCCGCTGGAGGGGGCCATGCACTCCGAG
TTTGAGGCGCACTTCAAACTGCAAGCGTGA