Trimin1|339409|MIX48172_2_8 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|339409
Unique NameTrimin1|339409|MIX48172_2_8
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length368
Homology
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: A0A835YGV5_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGV5_9STRA)

HSP 1 Score: 659 bits (1699), Expect = 9.150e-238
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query:    1 MADHAATKGRKQKRNCSDNPRCLYGLGEGKISGFAAKQDSNSTQTVCSMLGVIVALQRVCNKSIIKSTNSIFLELQSGGFCKQHHACTGELTLQDCINNQGKEGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCSTEAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIKASLLS 367
            MADHAATKGRKQKRNCSDNPRCLYGLGEGKISGFAAKQDSNSTQTVCSMLGVIVALQRVCNKSIIKSTNSIFLELQSGGFCKQHHACTGELTLQDCINNQGKEGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCSTEAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIKASLLS
Sbjct:    1 MADHAATKGRKQKRNCSDNPRCLYGLGEGKISGFAAKQDSNSTQTVCSMLGVIVALQRVCNKSIIKSTNSIFLELQSGGFCKQHHACTGELTLQDCINNQGKEGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCSTEAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIKASLLS 367          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: A0A8K1C628_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C628_PYTOL)

HSP 1 Score: 88.6 bits (218), Expect = 2.390e-15
Identity = 76/271 (28.04%), Postives = 105/271 (38.75%), Query Frame = 0
Query:   95 DCINNQGK--EGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCST-EAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIK 362
            +C+   G+  +GIW  K  +   LG DP   +R P  +        A V D             A+    P GLRNLGATCYLN+ LQC F + PFR+ +Y+    E   + +  Q + ALQ +FG +Q G+ +V+D                                  A  AS L LN   QQD  EFN L    +    S  R +  G                       ++ LF+      T+C +C   S RP    E+ L IK
Sbjct:   63 NCLYGLGEYQKGIWQTKKLVRRLLGDDPRELQRAPYTS--------AAVTDL------------ATTRWAPCGLRNLGATCYLNSMLQCLFMIQPFRQAVYSWEPQEKNVNPQQVQQMRALQRLFGAMQSGNKNVYD---------------------------------PAEFASTLSLNNVVQQDAQEFNKLLLAHIRGIFSQSRLEHHG---------------------ELVDQLFQGQMNYVTKCLRCNQRSSRPSSYQEISLNIK 259          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: G4ZAZ0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZAZ0_PHYSP)

HSP 1 Score: 88.6 bits (218), Expect = 2.450e-15
Identity = 76/290 (26.21%), Postives = 107/290 (36.90%), Query Frame = 0
Query:   84 HHACTGELT--LQDCINN--------QGKEGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCST-EAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIK 362
            HH   G     L++C +N        +  +G+W ++  LL   GPDP RARR+                               +G  MP GLRNLGATCYLN+ LQC F  +PFRR +Y     + + DE   + + ALQ +F  +Q G+ S +D                                  +  AS L LN   QQD  EF+ L    L       R  +                         ++ +F+      T+C +C   S RP    E+ L IK
Sbjct:   85 HHKKRGRAASALRNCADNPNCLYGLGERLKGVWRRESLLLRVFGPDP-RARRRGSGR---------------------------AGRPMPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYGWEPKQPLTDEEQARTMRALQKLFAQMQLGNESYYD---------------------------------PSEFASTLSLNNVMQQDAQEFSKLLLTHLRAIFGQSRISS---------------------HWDLVDRIFQGQMSYVTKCLRCKNKSMRPSSYYEISLNIK 292          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: A0A6A3WD98_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WD98_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.550e-14
Identity = 75/290 (25.86%), Postives = 106/290 (36.55%), Query Frame = 0
Query:   84 HHACTGELT--LQDCINN--------QGKEGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCST-EAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIK 362
            HH   G+    L++C +N        + ++G+W ++  LL   GPDP RARR+                               +G   P GLRNLGATCYLN+ LQC F  +PFRR +Y     E + D+     + ALQ +F  +Q G+ S +D                                     AS L LN   QQD  EF+ L    L       R  +                         ++ +F+      T+C +C   S RP    E+ L IK
Sbjct:   34 HHRRRGKAASALRNCADNPNCLYGLGERQKGVWRRESLLLRVFGPDP-RARRRGSGR---------------------------AGRPTPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEPKETLVDKEQALQMRALQKLFAQMQLGNESYYD---------------------------------PTEFASTLSLNNVMQQDAQEFSKLLLTHLRTIFGQSRFSS---------------------HWDLVDRIFQGQMSYVTKCLRCKNKSMRPSSYYEISLNIK 241          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: A0A8K0JIF0_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JIF0_9TREE)

HSP 1 Score: 82.8 bits (203), Expect = 1.960e-13
Identity = 64/204 (31.37%), Postives = 82/204 (40.20%), Query Frame = 0
Query:  161 LMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCSTEAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIKAS 364
            ++PVGLRNLGATCY NA LQ W+ ++PFR  +Y C+T+      +     AL   F  LQ    SV D                                  A L   L L   +QQD SEF+ LF  LL    S   +DA                       S I D F    +  T C  CGYVS RP+  +EL + ++ S
Sbjct:  219 VLPVGLRNLGATCYANAFLQLWYRILPFRAAVYACATDPTMPSTSPCFQLAL--TFTGLQKSARSVFD---------------------------------PAGLVEALRLEKGDQQDASEFSKLFMALLQTEFSK-NADAK--------------------VKSVINDQFEGKLKYRTECMTCGYVSERPENFLELEISMEGS 366          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: D0MUE6_PHYIT (Ubiquitin-specific protease, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MUE6_PHYIT)

HSP 1 Score: 80.5 bits (197), Expect = 1.160e-12
Identity = 63/222 (28.38%), Postives = 86/222 (38.74%), Query Frame = 0
Query:  142 DDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCSTEA-IADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIK 362
            DD  ++E+ES       G  MP GLRNLGATCYLN+ LQC F  +PFR+ +Y    +  + D+   Q + ALQ +F  +Q G+ S +D                                     AS L LN   QQD  EF+ L    L     + R                            ++ +F+      T+C KC   S RP    E+ L IK
Sbjct:   78 DDPRERERESN----KHGKPMPCGLRNLGATCYLNSMLQCLFVNLPFRQAVYEWEPKGQLVDKEQAQQMRALQKLFAQMQLGNESYYD---------------------------------PTEFASTLSLNNVMQQDAQEFSKLLLAHLRTIFGHSRFSR---------------------HWDLVDRIFQGQMSYVTKCLKCKNKSMRPSSYYEISLNIK 241          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: A0A484E116_BRELC (Uncharacterized protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E116_BRELC)

HSP 1 Score: 78.2 bits (191), Expect = 6.320e-12
Identity = 77/290 (26.55%), Postives = 106/290 (36.55%), Query Frame = 0
Query:   84 HHACTGELT--LQDCINN--------QGKEGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCST-EAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIK 362
            HH   G+    +++C+NN        +   GIW     +    G DP R R++PL A                            G  MP GLRNLGATCYLN+ LQC +  +PFR+ +Y     E + D+     + ALQ +F  +Q G+ S +D  V                                  AS L LN   QQD  EF+ L    L       +S  P                      + ++ LF+      T+C KC   S RP    E+ L IK
Sbjct:   33 HHRKIGKNVGMVRNCVNNPNCLYGLGEHYHGIWQSARLIRRLYGSDP-RERKRPLNAC---------------------------GKAMPCGLRNLGATCYLNSMLQCLYVNLPFRQAVYEWEPKEQLVDKALTLQMRALQKLFAQMQLGNESYYDPTV---------------------------------FASTLSLNRGMQQDAQEFSKLLLAHLRTIFW--QSKIP-------------------RHWNLVDKLFQGQMCYVTKCLKCQNRSMRPSSYYEISLNIK 240          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: A0A507FQE2_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FQE2_9FUNG)

HSP 1 Score: 77.8 bits (190), Expect = 8.250e-12
Identity = 57/203 (28.08%), Postives = 82/203 (40.39%), Query Frame = 0
Query:  162 MPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCSTEAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIKAS 364
            +PVGL+NL ATCYLN  LQ WFH +PFR  +Y       ADE +  +++ L+  F ++QCG   V D                                        L++++  QQD  EF+ LF   L   LS+  +  P V+                   + I+ LF  +    TRC  C   SRR +   ++ L I  S
Sbjct:  135 LPVGLKNLAATCYLNTLLQVWFHTVPFRSAVYAYEL-GCADEASDNIMNNLKIAFAYMQCGSKGVFD---------------------------------PRQFVDSLKIDSGIQQDAQEFSKLFTATLENLLSHQTN--PNVR-------------------TLIKTLFEGECAYVTRCKSCSRESRRAELFRDIELSITES 282          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: A0A2R5GS10_9STRA (Ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GS10_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 9.270e-12
Identity = 70/272 (25.74%), Postives = 107/272 (39.34%), Query Frame = 0
Query:   95 DCINNQGKE-GIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYN---CSTEAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIK 362
            +C+   G+  GIW  K S+ + LGPDP    R+P +                               LMPVGL NLGATCY+NA +Q  F +  FR  I++    ++ +   E++   +  LQ VF  +Q G+A   D+                                   L SLLEL+++ QQD  EF+ L   L++      +   P V+G                    I D+F    +   +C  C   S+RP+   E+++ IK
Sbjct:  224 NCLYGLGENSGIWTSKFSVSSLLGPDPRTRFREPKS-------------------------------LMPVGLINLGATCYVNALIQTLFMIPSFRHLIFSWTPATSPSTETEKHEAPMQELQLVFALMQNGNAKTQDLR---------------------------------KLVSLLELDSSYQQDAQEFHKLLLNLISGIAE--KQTNPEVKG--------------------IGDMFLGSVDNVVKCLNCRKASKRPEDIQEIQVNIK 409          
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Match: W2RHL7_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RHL7_PHYPN)

HSP 1 Score: 77.4 bits (189), Expect = 1.050e-11
Identity = 62/219 (28.31%), Postives = 81/219 (36.99%), Query Frame = 0
Query:  145 GDQEQESGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCST-EAIADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWXXXXXXXXXXXXXXXXXXXXXXXAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSDAPGVQGGSSSXXXXXXXXXXXXXASEIEDLFRIDAEMTTRCCKCGYVSRRPDPSIELRLPIK 362
            GD  +E   V    G  MP GLRNLGATCYLN+ LQC F  +PFR+ +Y     E + D+   Q + ALQ +F  +Q G+ S +D                                     AS L LN   QQD  EF+ L    L       R                            ++ +F+      T+C KC   S R     E+ L IK
Sbjct:   76 GDDPRERERVSSKHGDPMPCGLRNLGATCYLNSMLQCLFVNLPFRQAVYEWEPKEQLVDKEQTQQMRALQKLFAQMQLGNESYYD---------------------------------PTEFASTLSLNNVMQQDAQEFSKLLLAHLRTIFGQSRFSR---------------------HWDLVDRIFQGQMSYVTKCLKCKNKSMRLSSYYEISLNIK 240          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|339409 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YGV5_9STRA9.150e-238100.00USP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A8K1C628_PYTOL2.390e-1528.04Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4ZAZ0_PHYSP2.450e-1526.21Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A3WD98_9STRA2.550e-1425.86Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A8K0JIF0_9TREE1.960e-1331.37Uncharacterized protein n=2 Tax=Filobasidium flori... [more]
D0MUE6_PHYIT1.160e-1228.38Ubiquitin-specific protease, putative n=2 Tax=Phyt... [more]
A0A484E116_BRELC6.320e-1226.55Uncharacterized protein n=2 Tax=Bremia lactucae Ta... [more]
A0A507FQE2_9FUNG8.250e-1228.08Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
A0A2R5GS10_9STRA9.270e-1225.74Ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=H... [more]
W2RHL7_PHYPN1.050e-1128.31Uncharacterized protein n=1 Tax=Phytophthora paras... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 164..347
e-value: 1.5E-11
score: 44.3
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 156..366
e-value: 1.7E-26
score: 94.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..149
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 106..363
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 165..180
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 164..367
score: 16.399221
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 162..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_95contigContig_95:537697..542868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|339409mRNA_14681Tribonema minus UTEX_B_3156 mRNAContig_95 537627..542868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|339409|MIX48172_2_8 ID=Trimin1|339409|MIX48172_2_8|Name=jgi.p|Trimin1|339409|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=368bp
MADHAATKGRKQKRNCSDNPRCLYGLGEGKISGFAAKQDSNSTQTVCSML
GVIVALQRVCNKSIIKSTNSIFLELQSGGFCKQHHACTGELTLQDCINNQ
GKEGIWAKKPSLLTSLGPDPARARRKPLAALKGETGEAAGVDDKGDQEQE
SGGVLPASGALMPVGLRNLGATCYLNAQLQCWFHLIPFRRRIYNCSTEAI
ADERNRQVVHALQAVFGHLQCGDASVHDVAVKYRHNQQWQVVHALQAVFG
HLQCGDASVHDVAPLASLLELNTAEQQDPSEFNVLFAQLLARCLSNGRSD
APGVQGGSSSGSGSSGGGGGSGSASEIEDLFRIDAEMTTRCCKCGYVSRR
PDPSIELRLPIKASLLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf