mRNA_7948 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351585
Unique NamemRNA_7948
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: A0A836C813_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C813_9STRA)

HSP 1 Score: 741 bits (1912), Expect = 4.250e-269
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 1 
Query:    1 MDPVPHQQTERGRLDGDSRYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRPALQQQPAATAAMMTPNKPATSYTVSSNSNGTANVGTAFASNGLITMSVASGGGGGYGAPLPDGILLPPAPGQESDERY 1107
            MDPVPHQQTERGRLDGDSRYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRPALQQQPAATAAMMTPNKPATSYTVSSNSNGTANVGTAFASNGLITMSVASGGGGGYGAPLPDGILLPPAPGQESDERY
Sbjct:    1 MDPVPHQQTERGRLDGDSRYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRPALQQQPAATAAMMTPNKPATSYTVSSNSNGTANVGTAFASNGLITMSVASGGGGGYGAPLPDGILLPPAPGQESDERY 369
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: A0A835Z498_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z498_9STRA)

HSP 1 Score: 556 bits (1433), Expect = 2.910e-196
Identity = 279/351 (79.49%), Postives = 304/351 (86.61%), Query Frame = 1 
Query:   55 RYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRPALQQQPAATAAMMTPNKPATSYTVSSNSNGTANVGTAFASNGLITMSVASGGGGGYGAPLPDGILLPPAPGQESDERY 1107
            RY GPDGK +EIRNVW DNLEEEMAKIREVVE YPY+AMDTEFPGVVARP+GD  QSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSL EDMYAQDSIDLLKQSG+ F  H ARGIDV++FGELL+ SGLVLVDNVTW+SFHSGYDFGYLL KVLTS ALPGQEK+FF LLK+YFPRLYDIKYLMA+QDGFHGGLNKLGDDL+VERIGQKHQAGSDSLLTAQVFFKIV+TKFNGMSNLSREKYN ELFGYGNNNTVYRP             TP K A SYT+++NSNG AN+  AFA+NG+++MS  +G G    APLPD ILLPP P +E ++ Y
Sbjct:   23 RYTGPDGKYLEIRNVWVDNLEEEMAKIREVVETYPYVAMDTEFPGVVARPIGDFGQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLGEDMYAQDSIDLLKQSGINFDQHEARGIDVLEFGELLMTSGLVLVDNVTWVSFHSGYDFGYLL-KVLTSCALPGQEKEFFHLLKLYFPRLYDIKYLMASQDGFHGGLNKLGDDLSVERIGQKHQAGSDSLLTAQVFFKIVETKFNGMSNLSREKYNSELFGYGNNNTVYRPGQN-------VTSTPTKAAVSYTITANSNGAANLSAAFAANGVVSMS--NGAGAYANAPLPDDILLPPVPIEEGEDAY 363
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: A0A6H5JI77_9PHAE (Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI77_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 1.530e-134
Identity = 197/286 (68.88%), Postives = 235/286 (82.17%), Query Frame = 1 
Query:   34 GRLDGDSRYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAE-GCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNL----SREKYNLELFGYGNNNT-VYRP 873
            G  +   +++ PDG+LVEIRNVWADNLE EM  IRE+V+ YPY+AMDTEFPGVVARP+GD +Q D+QYQTLRCNVD+LK+IQLGLSFANEKGE  E GCC WQFNF F+L EDMYA DSI+LLK SG++F+ H  RGID+ DFGELL+ SGLVL+ NVTW+SFHSGYDFGYL+ K+LT S LP QE DFF LL++YFP++YDIKYL+++QDGFHGGLNKL DDL VERIG  HQAGSDSLLT QVF K+ D  FNG++NL    SR K+  +L+GYG N T +YRP
Sbjct:   42 GVAEASEKHRAPDGRLVEIRNVWADNLETEMVIIRELVQDYPYVAMDTEFPGVVARPVGDFNQPDFQYQTLRCNVDMLKMIQLGLSFANEKGELPEDGCCTWQFNFAFNLSEDMYAHDSIELLKNSGIDFQGHERRGIDLQDFGELLMTSGLVLLPNVTWLSFHSGYDFGYLI-KLLTCSNLPTQESDFFDLLQLYFPKIYDIKYLVSSQDGFHGGLNKLADDLKVERIGPMHQAGSDSLLTEQVFLKVADVYFNGVANLDLGKSRGKFAGQLYGYGGNQTGIYRP 326
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: D8LIU5_ECTSI (Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU5_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 1.360e-133
Identity = 194/274 (70.80%), Postives = 228/274 (83.21%), Query Frame = 1 
Query:   55 RYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAE-GCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNL----SREKYNLELFGYGNNNT 861
            +++ PDG+LVEIRNVWADNLE EM  IRE+VE YPY+AMDTEFPGVVARP+GD +Q D+QYQTLRCNVD+LK+IQLGLSFANEKGE  E GCC WQFNF F+L EDMYA DSI LLK SG++F+ H  RGID+ DFGELL+ SGLVL+ NVTW+SFHSGYDFGYL+ K+LT S LP QE DFF LL++YFP++YDIKYL+++QDGFHGGLNKL DDL VERIG  HQAGSDSLLT QVF K+ D  FNG++NL    SR K+  +L+GYG N T
Sbjct:   46 KHRAPDGRLVEIRNVWADNLETEMVIIRELVEDYPYVAMDTEFPGVVARPVGDFNQPDFQYQTLRCNVDMLKMIQLGLSFANEKGELPEDGCCTWQFNFAFNLSEDMYAHDSIQLLKNSGIDFQGHERRGIDLQDFGELLMTSGLVLLPNVTWLSFHSGYDFGYLI-KLLTCSNLPTQESDFFDLLQLYFPKIYDIKYLVSSQDGFHGGLNKLADDLKVERIGPMHQAGSDSLLTEQVFLKVADVYFNGVANLDQGKSRGKFAGQLYGYGGNQT 318
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: A0A7S2V6J5_9STRA (Poly(A)-specific ribonuclease (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J5_9STRA)

HSP 1 Score: 382 bits (980), Expect = 1.670e-128
Identity = 187/273 (68.50%), Postives = 219/273 (80.22%), Query Frame = 1 
Query:   58 YKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFN-GMSNLSREKYNLELFGYGNNNTVYRP 873
            Y  P+GK VEIR+VWA NLE+EMA IRE+V +YP+IAMDTEFPGVVARP  D + SDY YQTLRCNVDLLKIIQLG++FA++ GE AEGC CWQFNFKF+L EDMYAQDSIDLLK SG+EF  H   GIDV  FGELLI SGLVL+DNV WISFHSGYDFGYLL K+LT  ALP +E  FF LL++YFP +YDIKYLM   DG HGGLNKL +D+ VERIG  HQAGSDSLLTAQ FF++++ +F+  +S     K+  EL+G G N+TVY+P
Sbjct:    1 YTAPNGKSVEIRDVWASNLEQEMACIRELVPRYPFIAMDTEFPGVVARPASDYNSSDYMYQTLRCNVDLLKIIQLGIAFADKNGEIAEGCACWQFNFKFNLSEDMYAQDSIDLLKASGIEFTRHEKYGIDVHHFGELLITSGLVLMDNVKWISFHSGYDFGYLL-KILTCQALPAEEAHFFELLRLYFPCIYDIKYLMTICDGIHGGLNKLAEDIKVERIGPMHQAGSDSLLTAQAFFRLIELRFSVPISEWDDSKFRGELYGLGGNHTVYKP 272
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: W7TF71_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TF71_9STRA)

HSP 1 Score: 371 bits (952), Expect = 3.100e-123
Identity = 179/275 (65.09%), Postives = 217/275 (78.91%), Query Frame = 1 
Query:   58 YKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRPALQ 882
            Y G DGK +EIR VW +NL++EM  +REVVE+YPY+AMDTEFPGVVARP+GDVS SDYQY+TL+CNVDLLKIIQLGLSFA+  G     C  WQFNF+FSL +D+YA+DSI+LLKQSG++F  H + GIDV  FGELL+ SGLVL+D V WISFHSGYDFGYLL KVLT +ALP  E  FF LL+ YFP  YDIKYLM    G HGGL ++ ++L+V R+G  HQAGSDSLLTAQ FF++    F+G++NLS EK+  ELFG G+N+TVYR  +Q
Sbjct:   25 YTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLL-KVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQ 298
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: K8YSH1_NANGC (Poly(A)-specific ribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSH1_NANGC)

HSP 1 Score: 371 bits (952), Expect = 4.310e-121
Identity = 179/275 (65.09%), Postives = 217/275 (78.91%), Query Frame = 1 
Query:   58 YKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRPALQ 882
            Y G DGK +EIR VW +NL++EM  +REVVE+YPY+AMDTEFPGVVARP+GDVS SDYQY+TL+CNVDLLKIIQLGLSFA+  G     C  WQFNF+FSL +D+YA+DSI+LLKQSG++F  H + GIDV  FGELL+ SGLVL+D V WISFHSGYDFGYLL KVLT +ALP  E  FF LL+ YFP  YDIKYLM    G HGGL ++ ++L+V R+G  HQAGSDSLLTAQ FF++    F+G++NLS EK+  ELFG G+N+TVYR  +Q
Sbjct:  178 YTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLL-KVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQ 451
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: A0A7S2SP02_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP02_9STRA)

HSP 1 Score: 360 bits (925), Expect = 2.120e-119
Identity = 176/282 (62.41%), Postives = 222/282 (78.72%), Query Frame = 1 
Query:   31 RGRLDGDSRYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSRE-KYNLELFGYGNNNTVYRP 873
            R +  G   + GP+GK+VEIR+VW  NL+EEMA IR++V  YP++AMDTEFPGVVARP+ D    DYQYQTLRCNVDLLKIIQLG++F+NEKGE   GC  WQFNFKF+++EDMYAQDSIDLL ++G++F  H   GIDV+ FGEL+I SGLVLVD+V WISFHSGYDFGYLL K+LT SALPG E++FF +LK+YFP  +DIKY++ + +  HGGL K+ DDL  +RIG  HQAGSDSL+TA  FF++ + +F G S++ ++ K+  ELFG G N TVYRP
Sbjct:   45 RSKNKGSGVFPGPNGKMVEIRDVWGHNLDEEMANIRKIVVDYPFVAMDTEFPGVVARPITDQYAHDYQYQTLRCNVDLLKIIQLGIAFSNEKGEHPPGCVSWQFNFKFNIEEDMYAQDSIDLLMEAGIDFDRHEEEGIDVMYFGELMITSGLVLVDSVRWISFHSGYDFGYLL-KLLTCSALPGGEQEFFEVLKIYFPYYFDIKYMVHSTE-LHGGLQKIADDLNCQRIGPMHQAGSDSLITAATFFRLSEERFGGPSSVEKDHKFVNELFGLGGNCTVYRP 324
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: A0A7S2F743_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F743_9STRA)

HSP 1 Score: 353 bits (907), Expect = 4.630e-117
Identity = 177/290 (61.03%), Postives = 212/290 (73.10%), Query Frame = 1 
Query:    7 PVPHQQTERGRLDGD-SRYKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRP 873
            P P    E+    G  S + GP+GKLVEIR+VW  NL+ EMA +R+ VE YPYIAMDTEFPGVVARP+ D   +DYQYQTLRCNVDLLKIIQLG++  NEKG+  + C  WQFNFKF+L EDMYAQDSIDLLK++G++F+ H   GIDV  FGEL+  SGLVLV+NV WISFHSGYDFGYLL K+LT  ALP  E +FF LLK YFP LYDIK+++   +  HGGL K+ DDL  +RIG  HQAGSD+LLTA  +FK+     +  +    +KY  ELFG G N TVYRP
Sbjct:    8 PPPSASMEQRNTKGSGSIFPGPNGKLVEIRDVWRSNLDSEMALVRKCVEDYPYIAMDTEFPGVVARPITDQYANDYQYQTLRCNVDLLKIIQLGIALVNEKGDHPDDCVAWQFNFKFNLQEDMYAQDSIDLLKEAGIDFKRHETEGIDVNYFGELMTTSGLVLVENVRWISFHSGYDFGYLL-KLLTCVALPSNESEFFELLKFYFPYLYDIKFMINGMNDLHGGLQKIADDLHAQRIGPMHQAGSDALLTADTYFKLCARLESDSAQDYDQKYENELFGLGGNCTVYRP 296
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BLAST of jgi.p|Trimin1|351585 vs. uniprot
Match: A0A7S1YCK0_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YCK0_9STRA)

HSP 1 Score: 351 bits (901), Expect = 6.880e-116
Identity = 170/272 (62.50%), Postives = 210/272 (77.21%), Query Frame = 1 
Query:   73 GKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKF----NGMSNLSREKYNLELFGYGNNNTVYRPA 876
            G+ +EIRNVWA+N+EEEM  IRE++EKYPY+AMDTEFPGVVARP+ +   +DY Y++L+CNVDLLKIIQLGLSFA+ +G FA  C CWQFNFKFSL +DM+AQDSIDLL  SG+ F DH  RGID + FGELL+ SGLVL D V W+SFHSGYD+GYLL K+LT+  LP  EK+FF  L++YFP +YDIKY+ +  DG  GGL KL DDL  +R+G +HQAGSDSLLT   +F +   KF    NG+S +S  KY  ELFGYG+N+TV + A
Sbjct:   59 GEKLEIRNVWAENVEEEMYHIRELIEKYPYVAMDTEFPGVVARPVSETFTTDYHYKSLKCNVDLLKIIQLGLSFADAEGNFAPQCPCWQFNFKFSLQDDMFAQDSIDLLVNSGISFEDHATRGIDPLLFGELLMVSGLVLDDRVKWVSFHSGYDYGYLL-KLLTTKDLPADEKNFFENLRIYFPTIYDIKYMTSLVDGHFGGLQKLADDLGCQRLGAEHQAGSDSLLTMSTYFALAKKKFTVSSNGISRISDHKYKNELFGYGSNHTVRKSA 329
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351585 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C813_9STRA4.250e-269100.00Poly(A)-specific ribonuclease n=1 Tax=Tribonema mi... [more]
A0A835Z498_9STRA2.910e-19679.49Poly(A)-specific ribonuclease n=1 Tax=Tribonema mi... [more]
A0A6H5JI77_9PHAE1.530e-13468.88Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus s... [more]
D8LIU5_ECTSI1.360e-13370.80Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus s... [more]
A0A7S2V6J5_9STRA1.670e-12868.50Poly(A)-specific ribonuclease (Fragment) n=1 Tax=F... [more]
W7TF71_9STRA3.100e-12365.09Poly(A)-specific ribonuclease n=1 Tax=Nannochlorop... [more]
K8YSH1_NANGC4.310e-12165.09Poly(A)-specific ribonuclease n=2 Tax=Monodopsidac... [more]
A0A7S2SP02_9STRA2.120e-11962.41Poly(A)-specific ribonuclease n=1 Tax=Rhizochromul... [more]
A0A7S2F743_9STRA4.630e-11761.03Poly(A)-specific ribonuclease n=1 Tax=Dictyocha sp... [more]
A0A7S1YCK0_9STRA6.880e-11662.50Poly(A)-specific ribonuclease n=1 Tax=Grammatophor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:177190..181707 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351585|estExt_Genemark1.C_Ctg_940035
BRITEko00000,ko00001,ko03019
KEGG Pathwayko03018,map03018
KEGG koko:K12581
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000122,GO:0000175,GO:0000278,GO:0000288,GO:0000289,GO:0000290,GO:0000291,GO:0000932,GO:0000956,GO:0000988,GO:0000989,GO:0001076,GO:0001191,GO:0001932,GO:0001959,GO:0001960,GO:0002252,GO:0002376,GO:0002682,GO:0002683,GO:0003006,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004535,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005937,GO:0005975,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006977,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008285,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010948,GO:0016043,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017148,GO:0018130,GO:0018995,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023057,GO:0030014,GO:0030015,GO:0030154,GO:0030330,GO:0030427,GO:0031047,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031347,GO:0031348,GO:0031399,GO:0031570,GO:0031571,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0033962,GO:0034243,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035194,GO:0035195,GO:0035556,GO:0035770,GO:0036464,GO:0040029,GO:0042025,GO:0042127,GO:0042325,GO:0042509,GO:0042770,GO:0042995,GO:0043167,GO:0043169,GO:0043170,GO:0043186,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043332,GO:0043656,GO:0043657,GO:0043900,GO:0043902,GO:0043903,GO:0043928,GO:0043933,GO:0044085,GO:0044094,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044463,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045069,GO:0045070,GO:0045088,GO:0045495,GO:0045786,GO:0045787,GO:0045824,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045944,GO:0046425,GO:0046483,GO:0046700,GO:0046872,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048585,GO:0048609,GO:0048856,GO:0048869,GO:0050730,GO:0050776,GO:0050777,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051286,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060211,GO:0060213,GO:0060255,GO:0060293,GO:0060338,GO:0060339,GO:0060759,GO:0060761,GO:0061013,GO:0061014,GO:0065003,GO:0065007,GO:0070013,GO:0070925,GO:0071156,GO:0071158,GO:0071704,GO:0071826,GO:0071840,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0075341,GO:0080090,GO:0080134,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097659,GO:0098542,GO:0120025,GO:0120038,GO:0140098,GO:0140110,GO:1900151,GO:1900153,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902679,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903311,GO:1903313,GO:1903506,GO:1903507,GO:1903508,GO:1903900,GO:1903902,GO:1904892,GO:1990904,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2001141
Preferred nameCNOT8
Descriptionexonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
COG categoryA
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5228@1|root,KOG0304@2759|Eukaryota
Evalue2.46e-135
Seed ortholog2880.D8LIU5
Hectar predicted targeting categoryother localisation
TranscriptId351907
TrackFilteredModels1
ProteinId351585
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351585gene_7948Tribonema minus UTEX_B_3156 geneContig_94 177190..181707 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351585Trimin1|351585|estExt_Genemark1.C_Ctg_940035Tribonema minus UTEX_B_3156 polypeptideContig_94 177374..181707 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7948_5exon_7948_5Tribonema minus UTEX_B_3156 exonContig_94 177190..177778 -
exon_7948_4exon_7948_4Tribonema minus UTEX_B_3156 exonContig_94 178266..178446 -
exon_7948_3exon_7948_3Tribonema minus UTEX_B_3156 exonContig_94 179365..179756 -
exon_7948_2exon_7948_2Tribonema minus UTEX_B_3156 exonContig_94 181382..181461 -
exon_7948_1exon_7948_1Tribonema minus UTEX_B_3156 exonContig_94 181656..181707 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_7948UTR3_7948Tribonema minus UTEX_B_3156 three_prime_UTRContig_94 177190..177373 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7948CDS_7948Tribonema minus UTEX_B_3156 CDSContig_94 181656..181707 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7948 ID=mRNA_7948|Name=jgi.p|Trimin1|351585|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1294bp|location=Sequence derived from alignment at Contig_94:177190..181707- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGATCCCGTACCACATCAGCAGACGGAGCGAGGGCGCCTGGACGGCGA
CAGTCGGTACAAAGGACCGGATGGCAAGCTGGTGGAGATAAGGAATGTGT
GGGCGGACAACTTGGAGGAGGAAATGGCCAAGATTCGTGAAGTGGTAGAA
AAGTACCCCTACATCGCCATGGATACGGAGTTCCCGGGGGTGGTGGCTCG
CCCCCTGGGCGACGTCTCCCAGAGCGACTACCAGTACCAGACGCTGCGCT
GCAACGTCGACCTCCTCAAGATCATACAGCTGGGGCTGAGCTTCGCCAAC
GAAAAGGGGGAGTTTGCGGAGGGGTGCTGCTGCTGGCAGTTCAACTTCAA
GTTCTCGCTGGACGAGGACATGTACGCGCAGGATTCGATTGATTTGCTCA
AGCAGAGCGGGCTGGAGTTCCGCGATCACTGCGCGCGTGGCATCGACGTC
ATCGATTTTGGCGAGCTGCTCATCGCGAGCGGGCTAGTGCTTGTGGACAA
CGTCACGTGGATCTCCTTCCACAGCGGCTATGATTTTGGCTATCTGTTGG
GCAAGGTGCTCACATCATCGGCGCTGCCTGGTCAAGAGAAGGACTTCTTC
ACCCTGCTGAAGATGTACTTCCCTCGCCTGTACGACATCAAGTACCTGAT
GGCCAATCAAGATGGTTTTCACGGGGGGCTGAACAAGCTTGGGGACGACC
TTGCGGTCGAGCGAATAGGGCAGAAGCACCAGGCTGGCAGCGACTCCCTC
CTCACCGCGCAAGTCTTCTTCAAGATCGTAGACACCAAGTTCAACGGCAT
GTCCAACCTCAGCCGCGAGAAGTACAACCTGGAGCTCTTTGGCTACGGTA
ACAACAACACCGTCTACAGGCCCGCACTGCAGCAGCAACCTGCAGCAACG
GCGGCTATGATGACCCCCAACAAGCCTGCCACCTCGTACACTGTCAGCAG
CAACTCCAACGGCACGGCGAACGTTGGCACCGCCTTTGCGTCAAACGGAC
TCATCACTATGAGTGTTGCCAGCGGCGGCGGCGGAGGTTATGGTGCCCCG
CTGCCAGACGGCATTCTGCTGCCCCCCGCGCCGGGGCAAGAGAGCGACGA
GCGGTACTAGGGCGCTGCCTGCCCTGTTGTGGCTGTAGCTGTCGCTACGT
GCGGTGGCTATACATGCGACTTCACCTAATGCAGGTCATTGACGCCTTGT
ATAGATGTGACGGGAGGGTTTGTGTACACAGGGGACGCCAAGTCTATGCG
TCGCCAGCTCAAAATGGCGTGCCCAATATCACAGTGGTCTGCTG
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protein sequence of jgi.p|Trimin1|351585

>Trimin1|351585|estExt_Genemark1.C_Ctg_940035 ID=Trimin1|351585|estExt_Genemark1.C_Ctg_940035|Name=jgi.p|Trimin1|351585|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=370bp
MDPVPHQQTERGRLDGDSRYKGPDGKLVEIRNVWADNLEEEMAKIREVVE
KYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFAN
EKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDV
IDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFF
TLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSL
LTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRPALQQQPAAT
AAMMTPNKPATSYTVSSNSNGTANVGTAFASNGLITMSVASGGGGGYGAP
LPDGILLPPAPGQESDERY*
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mRNA from alignment at Contig_94:177190..181707-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7948 ID=mRNA_7948|Name=jgi.p|Trimin1|351585|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4518bp|location=Sequence derived from alignment at Contig_94:177190..181707- (Tribonema minus UTEX_B_3156 )
ATGGATCCCGTACCACATCAGCAGACGGAGCGAGGGCGCCTGGACGGCGA
CAGTACACGAAATCAGCCAGTACAACAGCAACAGCAGTGGAAAGGACAGG
ATGGTGCTGGTAAGTTGCAGTTGCAGCAGTTGCAGCTGCCTCCATATTGT
GATCAAGTTGAACACGGCAACATCGTGCCATCTGATAGGTGCGATGTTTC
ATTTGTCAACTGCGTTTCCTCTTATGCCGAGTCTTGACAGTGGCAGGTCG
GTACAAAGGACCGGATGGCAAGCTGGTGGAGATAAGGAATGTGTGGGCGG
ACAACTTGGAGGAGGAAATGGCCAAGGTGAACACCGACAGCAATTCTACC
CCTGTACATATCCTACTGGGCATTTGGTAGAGGTTTGAGCCGGTCCACTG
AACTGTCTTAATTGCAGACGGCTTAGCGCACGGTCCGCCTGAGCCGTCGA
AGACGGATTCTGGCCACTGCTACCGGCTTTGGCCGTCTTTTCAGTCTTAG
CCGGCCTAGCCCGTCAGCCAGCACAGCATGGACTCACATTACTCGATTGT
CGCAAAACTGAACAATTTTAAGCGTGAGTGCCCCAACCTGGCTACCTCGT
GTAGGCCACATCACTTGCGTTGGTATTAAACTGTGTCCAGCACTTCACTT
TGTGACGAATCCGTCCTGTCAGGTTTGTCGTTGTGGTTTGCAAGTGCTTC
TCGCAAGGCGCATTAAGTCTACGCCAGAAAGTATAACACGCAGTGCCATG
CACGCGTGCAGTCCCAGCCAAAAGGTAAAGCCTTTGCCTGCTCCGTCATC
CCTACAGCGAAGCACAGCAACACTCCTGCATGGTGCATATCGCATCAAGT
GCGCAGCAGCAGCAGCAGCACAAGCGGTTACCCAACTTTACCGCAGACTT
CATACTTGAAGTGAATTAGACGAAGAGTGTGTGAAACAGATAGCAGCAGC
AACAGCTAGCAGCAGCAGCGGTTGCATCAGCTATAGGCAAGGCGCAGCAG
GTGTTGCCGATACGTGTATGCGGACTGGCATCACAACTCAAGTTCGGAAC
TGCTGCAACAGCGTTGCATTTGTCAACTGCAGCTACACTGCTCAGAAGGC
GTGAGCGTCACCTTAACTATGTGCTTGAGCAGTGAGTGTGTGAGAATGAG
GTTGCACGGCTTATACTGGCTCGGCTCTCGGGCGGCGCCACAACGGTCTG
CGGTGGTATGATTGGTATGATCACAAAAACCCCATTCCGCAGTTGCCTAC
TTCAAATACTGACTTCCAGTTAAGCAATCGCCATCTAACAAGACTTTTGG
CAGTGAAACATTTAGGCTCTTGATTGTCAGATGTGGTGACCATGTTCGTC
TGCACGAACCACGATTGTGAGACTTGGCATCTCCTGCATCAGGCACATCA
AGGGGTTCTCACACCTCAGTGCAACGCAGCATGACAGATGGCACAAGGCG
ATGCACCACCAATCACCAGAAGTGCAGAAGGAAGTTCAATACTTTTGAGT
AGTACCTCACAATCATCACGCAGCCACGCCACGCTCAATACCTCAGCACT
GCGCATCGTGATACAGACAGAAGGGGCTGCATTATAGGTAATACTCAGGA
TGTAGCGCCACTTGCAGTACTACACTGACCTCAGCAATCCTGCGCATACT
GGTCAAGCGTTGGAGAGCCGTTGCTGTGATCGCAGTGTCACAATTGCAAT
TGAGACCACCTATCCCACCATTCCTCATCGCTCAATTGAATGCAGCCGCC
GGGTTGATGAACTACCAGTATGCTGCAAGGGCCCCGTTCAAAGTTGACAT
AGAACACAGATTGTCGTGCAGAGCTTGAAACCTGTTGCACAATATAGTAC
TTTGAAATATATAGCACACAAAAGTCATGCATCGATGCAAATCGACAGCA
TAATGTCGCATTTACCCCCCTCCCCTCCGGGCCGCTCCACACCCCCCCCA
GATTCGTGAAGTGGTAGAAAAGTACCCCTACATCGCCATGGATACGGAGT
TCCCGGGGGTGGTGGCTCGCCCCCTGGGCGACGTCTCCCAGAGCGACTAC
CAGTACCAGACGCTGCGCTGCAACGTCGACCTCCTCAAGATCATACAGCT
GGGGCTGAGCTTCGCCAACGAAAAGGGGGAGTTTGCGGAGGGGTGCTGCT
GCTGGCAGTTCAACTTCAAGTTCTCGCTGGACGAGGACATGTACGCGCAG
GATTCGATTGATTTGCTCAAGCAGAGCGGGCTGGAGTTCCGCGATCACTG
CGCGCGTGGCATCGACGTCATCGATTTTGGCGAGCTGCTCATCGCGAGCG
GGCTAGTGCTTGTGGACAACGTCACGTGGATCTCCTTCCACAGGTGAGCG
CTGCTGCATGGCTGCAGCTGTGGCTCAGTTGTTGTACGAGAGCACTGCTG
CACAGCCACAAGCCGTCGCTGAGCACTTCTGCAGCTGGTGCTCAGCAGCA
TATCGGCATGCCAGGTGAGTGGTTTGCCTGGGATGAGCTGATGTTTGCGG
AATGTTTGGGGTGCTGCTGGCCACTTGTACATCAGCCTGGAGCGGTATGC
CTTCATCTGGATGGCCTCGCACTGAAACGCATGCTGGAGGCAGGGCGCTG
CTTTCGCATCTACCGTGCCTGCAGCACATGAAGCCGCTGTGCGGGGTGCG
CGCTATGCATGCGCACACGGCCAAGGAGTACATGTACTTCTCATAGATGA
ATCATTCCAATGCCTGTGTTGTGACAAAATCACACACTGCCGCAGGCCGC
ATGTACACGTACCGTTCCGCATGGCACATACTTCAATGTACATTTTCATG
TGCCGGCCTCCATTGCTAAGCAATGCTGGTGGAACATGAGCCGCCTTCTT
TAATCTCGCCCTGCCTTGTCGCCGGCAGTGGTTACGACTTTGGCTATGCT
TTGTCAGGGTTAGGGTTTGGCGCTGCTGCGCGATGTGCACGCAAATCAGT
ACTACTGCCTCTGATTTGGTTAGGCGACCAAGCCCTAAACGTGAGCTCCC
TCGTGGACCTAAGCGGAGTGTCACCTCCACAGCCCCAAGTTCAAAATAGA
AGTACACAAGTCGTCAGTACCCAGCCGCAGCAAGGACAGCTGTTGTGCCG
CCCACCGTCACCGCTCACAAGTGTCGGGCTTTTTGCTGCTAGCCTGATCT
GAACCCGTTGCGCACTCAGACCTCGCCCGATCCTGATGTTGTCCATCGCA
TTTCGACTCATGCTGCAATCGAATCACAACCCCTGTGCCTCGATGTTCGC
CATGTCTGCAGCGGCTATGATTTTGGCTATCTGTTGGGCAAGGTGCTCAC
ATCATCGGCGCTGCCTGGTCAAGAGAAGGACTTCTTCACCCTGCTGAAGA
TGTACTTCCCTCGCCTGTACGACATCAAGTACCTGATGGCCAATCAAGAT
GGTTTTCACGGGGGGCTGAACAAGCTTGGGGACGACCTTGCGGTGAGTTT
TGGGGGTTCCAGCTTGCTGTGATGAGAGAATTATGTGTTTCTTATGCAGT
GCTCGGCAGGTGAAGCGCCGCAGCAAGAATTGCACAAGGGTTGTGTCAAG
CGCATAAACGGCAGCTTGCACGCCTGCGGCAGGACGGTGATCGGCTGAGT
GTTTTTGTCCAGTTGTCCAGTACTGTGGCATCACTGTGGTGAGTACCTGC
AGCAGTATCAGCAGAGGTGCCTCGTCATATAAATGACTCTGCGCACTTAG
ACTCATTAAACAAGGCTGCAATTGCAGGAGGCAACTGTGACAGCTGATGG
CATTACAGTAACGCTTGCTAGATGATGCACACAGTATATGAATACGTGTG
CAAGGGACGCTACAGATTCCCCCGCAAATCAATGCGAGCGTGTTACTTGT
CAACCGCCGCAACACTGGTTTAATCTGAAACCCTAATGCTGACTGCGGTA
TGCATGCATTATCTCCTGCTGACCCACAGGTCGAGCGAATAGGGCAGAAG
CACCAGGCTGGCAGCGACTCCCTCCTCACCGCGCAAGTCTTCTTCAAGAT
CGTAGACACCAAGTTCAACGGCATGTCCAACCTCAGCCGCGAGAAGTACA
ACCTGGAGCTCTTTGGCTACGGTAACAACAACACCGTCTACAGGCCCGCA
CTGCAGCAGCAACCTGCAGCAACGGCGGCTATGATGACCCCCAACAAGCC
TGCCACCTCGTACACTGTCAGCAGCAACTCCAACGGCACGGCGAACGTTG
GCACCGCCTTTGCGTCAAACGGACTCATCACTATGAGTGTTGCCAGCGGC
GGCGGCGGAGGTTATGGTGCCCCGCTGCCAGACGGCATTCTGCTGCCCCC
CGCGCCGGGGCAAGAGAGCGACGAGCGGTACTAGGGCGCTGCCTGCCCTG
TTGTGGCTGTAGCTGTCGCTACGTGCGGTGGCTATACATGCGACTTCACC
TAATGCAGGTCATTGACGCCTTGTATAGATGTGACGGGAGGGTTTGTGTA
CACAGGGGACGCCAAGTCTATGCGTCGCCAGCTCAAAATGGCGTGCCCAA
TATCACAGTGGTCTGCTG
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Coding sequence (CDS) from alignment at Contig_94:177190..181707-

>mRNA_7948 ID=mRNA_7948|Name=jgi.p|Trimin1|351585|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1110bp|location=Sequence derived from alignment at Contig_94:177190..181707- (Tribonema minus UTEX_B_3156 )
ATGGATCCCGTACCACATCAGCAGACGGAGCGAGGGCGCCTGGACGGCGA
CAGTCGGTACAAAGGACCGGATGGCAAGCTGGTGGAGATAAGGAATGTGT
GGGCGGACAACTTGGAGGAGGAAATGGCCAAGATTCGTGAAGTGGTAGAA
AAGTACCCCTACATCGCCATGGATACGGAGTTCCCGGGGGTGGTGGCTCG
CCCCCTGGGCGACGTCTCCCAGAGCGACTACCAGTACCAGACGCTGCGCT
GCAACGTCGACCTCCTCAAGATCATACAGCTGGGGCTGAGCTTCGCCAAC
GAAAAGGGGGAGTTTGCGGAGGGGTGCTGCTGCTGGCAGTTCAACTTCAA
GTTCTCGCTGGACGAGGACATGTACGCGCAGGATTCGATTGATTTGCTCA
AGCAGAGCGGGCTGGAGTTCCGCGATCACTGCGCGCGTGGCATCGACGTC
ATCGATTTTGGCGAGCTGCTCATCGCGAGCGGGCTAGTGCTTGTGGACAA
CGTCACGTGGATCTCCTTCCACAGCGGCTATGATTTTGGCTATCTGTTGG
GCAAGGTGCTCACATCATCGGCGCTGCCTGGTCAAGAGAAGGACTTCTTC
ACCCTGCTGAAGATGTACTTCCCTCGCCTGTACGACATCAAGTACCTGAT
GGCCAATCAAGATGGTTTTCACGGGGGGCTGAACAAGCTTGGGGACGACC
TTGCGGTCGAGCGAATAGGGCAGAAGCACCAGGCTGGCAGCGACTCCCTC
CTCACCGCGCAAGTCTTCTTCAAGATCGTAGACACCAAGTTCAACGGCAT
GTCCAACCTCAGCCGCGAGAAGTACAACCTGGAGCTCTTTGGCTACGGTA
ACAACAACACCGTCTACAGGCCCGCACTGCAGCAGCAACCTGCAGCAACG
GCGGCTATGATGACCCCCAACAAGCCTGCCACCTCGTACACTGTCAGCAG
CAACTCCAACGGCACGGCGAACGTTGGCACCGCCTTTGCGTCAAACGGAC
TCATCACTATGAGTGTTGCCAGCGGCGGCGGCGGAGGTTATGGTGCCCCG
CTGCCAGACGGCATTCTGCTGCCCCCCGCGCCGGGGCAAGAGAGCGACGA
GCGGTACTAG
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