Trimin1|352345|estExt_Genemark1.C_Ctg_1160023 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: A0A836CPZ6_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPZ6_9STRA) HSP 1 Score: 410 bits (1055), Expect = 2.480e-144 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query: 1 MSSKGATTDDITTVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVREEFTADAVILTVSTERALAQGVIDHVIDATRGAAKATIVGE 226
MSSKGATTDDITTVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVREEFTADAVILTVSTERALAQGVIDHVIDATRGAAKATIVGE
Sbjct: 1 MSSKGATTDDITTVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVREEFTADAVILTVSTERALAQGVIDHVIDATRGAAKATIVGE 226
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: W7TTS7_9STRA (Thymidylate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTS7_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.440e-39 Identity = 87/205 (42.44%), Postives = 118/205 (57.56%), Query Frame = 0
Query: 13 TVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVREEFTADAVILTVSTERALAQGVIDHVIDATRG 217
T+ G E+ IKKSRF+ A +FA+ L V GD KA H CWAW+G E R +DDGEP GTAG+PIL++I+ E L V V RYFGG+ LG GGLVRAYGG AR CLR AE IP+ VR+ AP+++ GA++ N+ +++E++TA+ +I+ V + AL + + DATRG
Sbjct: 80 TLAGPAEYEEIIKKSRFLSRATPASSFAEAQTFLRDV-GDL-KASHNCWAWRG-HGEERSSDDGEPGGTAGRPILSAIESEDLVDVMVVVTRYFGGIKLGAGGLVRAYGGVARTCLRNAET--------------------LTHIPKVLVRLRAPLSMSGAVFQTINRTDKIKEDYTAEEIIVDVKVDAALIDNLRQQLQDATRG 261
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: A0A7S4I6C5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I6C5_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.790e-38 Identity = 94/225 (41.78%), Postives = 118/225 (52.44%), Query Frame = 0
Query: 2 SSKGATTDDITTVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKT--ESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVREEFTADA-----VILTVSTERALAQGVIDHVIDATRGAA 219
SS A +T G+ AAE IKKSRFIGY + D + VK +HPK RH C+ W + R +DDGEP+GTAG PIL I+GEGLS T VVRYFGGV LG GGL+RAYGGTARL LR A K V IP++ +RV A G +Y +K V + + + V L TE + + + +IDATRG+A
Sbjct: 69 SSSSAPVPQLTLEDGVHAAEQVIKKSRFIGYAKQCDNWGDAQEFIAAVKEEHPKGRHWCFGWVAGHNPVQERASDDGEPTGTAGAPILGGIKGEGLSDTACVVVRYFGGVKLGAGGLIRAYGGTARLALREAP--------------------KKVLIPKSSIRVSTGAANAGTIYRMASKFGGVASDESYNESGDLEVTLVCETEHV--ETLKEGIIDATRGSA 271
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: A0A7S2ABG2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ABG2_TRICV) HSP 1 Score: 137 bits (346), Expect = 6.260e-37 Identity = 87/206 (42.23%), Postives = 115/206 (55.83%), Query Frame = 0
Query: 17 ITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKT--ESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVREEFTADA---VILTVSTERALAQGVIDHVIDATRG 217
I AE TIKKSRF+G +AD + L V+ DHPK+RHVC+ + + R +DDGEPSGT G PIL I+GEGLS AVVRY+GGV LG GGL+RAYGGTARL L+ A TV IP++ VR+ A GA+Y ++ V + + DA + +T++ E V++ + DATRG
Sbjct: 25 IYVAEQTIKKSRFVGIAARCDNWADAQSFLATVRTDHPKSRHVCFGFVAGHNPVQERSSDDGEPSGTGGAPILGGIRGEGLSDVVCAVVRYYGGVKLGAGGLIRAYGGTARLVLQNAPT--------------------TVLIPKSTVRLRTGAANAGAVYQTASRYGGVAGDESYDAGGNLEVTITCESDSLGDVMEGIRDATRG 210
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: D7FHE6_ECTSI (UPF0029 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE6_ECTSI) HSP 1 Score: 135 bits (340), Expect = 2.520e-36 Identity = 72/131 (54.96%), Postives = 87/131 (66.41%), Query Frame = 0
Query: 2 SSKGATTDDITTVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAE 132
SS A + I TV G + E+TIKKSRFIG C A TF +G ALL V +HPKARH CWAW+G+ + R++DDGEP GTAGQPIL I+ EG+S+ LGTGGL RAYGG +R CL+AAE
Sbjct: 15 SSSPADQEQIVTVCGESETEETIKKSRFIGRCGPAATFEEGKALLGRVLKEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGQPILGGIESEGVSE-------------LGTGGLCRAYGGASRQCLQAAE 132
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: B8CDW6_THAPS (UPF0029 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDW6_THAPS) HSP 1 Score: 133 bits (334), Expect = 1.740e-35 Identity = 83/202 (41.09%), Postives = 116/202 (57.43%), Query Frame = 0
Query: 21 EDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQ--GVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVR--EEFTADAVI-LTVSTERALAQGVIDHVIDATRG 217
E+ +KKSRFIG ++ + L+ V+ +HPK+RHVC+ + GV TE R +DDGEP+GTAG PIL SI+GEGLS T VVRYFGGV LG GGL+RAYG ARL LR+A + IP++ +R+ A GA+YA+ K + E F + +T++ + + + D ++DATRG
Sbjct: 1 EEIVKKSRFIGLATHCTSWEEAQVYLEQVRKEHPKSRHVCFGFVSGGVGTE-RCSDDGEPTGTAGVPILGSIKGEGLSDTLCIVVRYFGGVKLGAGGLIRAYGSAARLVLRSAPT--------------------EIHIPKSTIRISTRTANSGAIYASAAKYGGITGGESFNDRGELEVTITCDEVDGEKLKDEIVDATRG 181
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: A0A7R9YZX2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YZX2_9STRA) HSP 1 Score: 130 bits (328), Expect = 7.750e-35 Identity = 70/131 (53.44%), Postives = 83/131 (63.36%), Query Frame = 0
Query: 3 SKGATTDDITTVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKT--ESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAA 131
S ++ +T G+ AAE IKKSRFIGY + D + VK +HPKARH C+ W + R +DDGEP+GTAG PIL I+GE LS T VVRYFGGV LG GGL+RAYGGTARL LR A
Sbjct: 24 SSSSSVPQLTLEDGVHAAEQVIKKSRFIGYAKQCDNWGDAQEFISAVKDEHPKARHWCFGWVAGHNPVQERASDDGEPTGTAGAPILGGIKGEDLSDTACVVVRYFGGVKLGAGGLIRAYGGTARLVLREA 154
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: A0A395L6B9_9HYPH (IMPACT family member YigZ n=8 Tax=Sinorhizobium/Ensifer group TaxID=227292 RepID=A0A395L6B9_9HYPH) HSP 1 Score: 130 bits (326), Expect = 3.750e-34 Identity = 82/197 (41.62%), Postives = 110/197 (55.84%), Query Frame = 0
Query: 24 IKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVE-APMALVGALYAATNKCVRVREEFTADAVILTVSTERALAQGVIDHVIDATRGAA 219
IKKSRF+ C P A L + P A H CWAW+ + R+NDDGEPSGTAG+PILA+I G+ L + V V R+FGG+LLG+GGL+RAYGGTA LCLRAAE + ++ +A + + A +AL+ A A N + V E FT ++TV + A G++ V D +RG A
Sbjct: 14 IKKSRFLAICAPVPDEQAAKAFL--AEHSDPTANHNCWAWR-IGQAYRFNDDGEPSGTAGKPILAAIDGQSLDRVAVVVTRWFGGILLGSGGLMRAYGGTAALCLRAAEK------------------IEMIETVRATIACDFADLALIKARLLARNVTL-VGESFTDKGPVMTVDMRKDEADGILAMVTDLSRGRA 188
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: UPI001AC2AF03 (YigZ family protein n=1 Tax=Microvirga sp. 3-52 TaxID=2792425 RepID=UPI001AC2AF03) HSP 1 Score: 128 bits (321), Expect = 2.160e-33 Identity = 86/207 (41.55%), Postives = 113/207 (54.59%), Query Frame = 0
Query: 18 TAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVE-APMALVGALYAATNKCVRVREEFTADAVILTVSTERALAQGVIDHVIDATRGAAKATI 223
T+ E IKKSRFI A P ++ A + P A H CWAW+ +T R++DDGEPSGTAG+PIL +I L Q V V R+FGGVLLG+GGLVRAYGGTA CLRAA+ + V + +A + V + +ALV A ++ + E FT VI+TV +A AQ +I + D TRG A +
Sbjct: 8 TSLEQAIKKSRFIAV--AGPLASEQAAKEFIAAHSDPNANHNCWAWRAGQTY-RFSDDGEPSGTAGKPILQAIDRLELDQVAVVVTRWFGGVLLGSGGLVRAYGGTAAACLRAAKR------------------VEIVPVQEATIFVPFSDLALVKARLSSASGVQIRNENFTEAGVIITVDLPKAAAQPIIRMITDVTRGNASVAV 193
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Match: A0A7Y0AXG7_9HYPH (YigZ family protein n=1 Tax=Rhizobium sp. S-51 TaxID=2728849 RepID=A0A7Y0AXG7_9HYPH) HSP 1 Score: 127 bits (318), Expect = 6.240e-33 Identity = 85/203 (41.87%), Postives = 108/203 (53.20%), Query Frame = 0
Query: 24 IKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEA---PMALVGALYAATNKCVRVREEFTADAVILTVSTERALAQGVIDHVIDATRGAAKATI 223
IKKSRFI + AP + A + P A H CWAW+ + R++DDGEPSGTAG+PIL +I G+GL V V R+FGG+LLG+GGL+RAYGGTA CLRAAE K I + + R+ A +ALV A A + E+FT ILTV+ A A G+ V D T G A+ I
Sbjct: 14 IKKSRFIAH--VAPVENEDAAKAFIAAAGDPAANHNCWAWR-IGQAYRFSDDGEPSGTAGKPILQAIDGQGLDNVAVVVTRWFGGILLGSGGLMRAYGGTAAACLRAAE--------------------KIEVIARIDARITAGFSDLALVKARLGAIPDLLVRNEDFTDSGAILTVALPEASAAGMARLVTDITSGRAQIKI 193 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352345 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|352345|estExt_Genemark1.C_Ctg_1160023 ID=Trimin1|352345|estExt_Genemark1.C_Ctg_1160023|Name=jgi.p|Trimin1|352345|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=227bpback to top |