mRNA_14616 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A835YKB4_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB4_9STRA) HSP 1 Score: 848 bits (2191), Expect = 2.650e-309 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 1
Query: 1 MLKTPEIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQASVAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAFNIRKLAAWVMLIVTCFASVLCTYNAIATAASKQ 1323
MLKTPEIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQASVAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAFNIRKLAAWVMLIVTCFASVLCTYNAIATAASKQ
Sbjct: 1 MLKTPEIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQASVAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAFNIRKLAAWVMLIVTCFASVLCTYNAIATAASKQ 441
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S2UXQ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ2_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.120e-77 Identity = 154/383 (40.21%), Postives = 233/383 (60.84%), Query Frame = 1
Query: 178 YATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHP-EARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVAAALRRVM--KAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAF--NIRKLAAWVMLIVTCFASVLCTYNAIATA 1311
+ TL LL MT F+++AY IL+RDI SGL+ +G +E T E+SN+VLV C + P C SL+ALR+ CY+GF S +VLT +I YR +N E+P E +++A T++ +L + PIMSL F+C FN+LSVH+ LVNPTR+R+K +IHS++ IYL +G LGYFYAY NT+D+I LNF+ SDK++V GR+GL T+ A+PM+ +PCR+ E + + + + +T L++ S S + TS+ N+ R+ + +H ++T ++ FCL A+ PGVA+VWS+CGSS+G V++ P++ YL+IR KK+ + K+ AW+M I + +V CTY ++ A
Sbjct: 2 HIVTLCLLLMTFFIMVAYEILIRDIASGLVEFTLG----HE-----ITKEQSNYVLVVCNLFVSPLCYFTSLYALRYTCYIGFGSVMVLTASICYRSLSFNAENPMEFAARSLAVTTDFGDVLYSLPIMSLVFLCHFNMLSVHSQLVNPTRQRVKSMIHSAMSLSTLIYLLMGLLGYFYAYENTKDNIFLNFSFSDKLLVVGRVGLFATLTCALPMMAIPCRENLLEFYNSIADWLEKCCGGTETQGLLTTVQNSPSTQD--------------PTSAGRRNIQMPNERMTTGQLVKHVVSTTFVIAFCLVIAICTPGVAVVWSVCGSSLGMMVAYFFPSVCYLRIRRKKSLLRSKVKMGAWLMAITSAGLTVFCTYQSVERA 361
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: D7FH68_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH68_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.910e-74 Identity = 156/391 (39.90%), Postives = 213/391 (54.48%), Query Frame = 1
Query: 145 VAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGAT--GSFDTSSMDANVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAFNIRKLAAWVMLIVTCFASVLCTYNAIATA 1311
V + AFG G TT +L+ MT+FV +AYM+LVRDIWSG++ E+ GE + + + ++ IGYR E N E P A+ + I+ AFPI L+F C FNILSVH+ VNPTRERLKG++H ++G +Y+ L GY YAY T+DDILLNFAPSD+V++ GRLG+G+TMLVAI +L+LPCRD + + E + + K + G G E+ T G+ T + R A RH TTV +M F LF A+S+PGV +VWSICGSSVGF + + LP +FYLKIR K FNIRK A+++++V+ A V+CT +A+ A
Sbjct: 17 VGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIV--------ESVIGETLDSDQSNH---------------------------------------IGYRSVEANQEDPTAKLGLKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEGTKDDILLNFAPSDRVMIVGRLGMGLTMLVAITILVLPCRDIVFLVMDSVAEKLQEWCAGGKEYLPVDGTG-------------EVLTTPGGTMVTKT---------RAFFLAVRHVGTTVAIMGFSLFCALSVPGVGVVWSICGSSVGFMICYLLPGVFYLKIRWHKQFNIRKAGAFLVVVVSSLAIVICTRHAVLQA 338
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S4RNK3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNK3_9STRA) HSP 1 Score: 230 bits (587), Expect = 5.720e-67 Identity = 155/404 (38.37%), Postives = 229/404 (56.68%), Query Frame = 1
Query: 127 AFSQASVAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFE-YNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLY--------EVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDA-NVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAF--NIRKLAAWVMLIVTCFASVLCTYNAI 1302
A S A V + A+GP TL+L +FV++AYM+LVRDI++ ++ L F + E T ++VL+G +IA +P L K LHALR+ CYVGF S VL VAI YR +E Y F S+ +L AFPI L+FMCQFN+L + SLVNPTR+R++ II ++ A + + G GY YA +T +ILLNF P D+V++ G++G G+T+ +A+ M+LLPCR+ L QL E+ K + + I +G SS Y +++ E+ T +M + A R+ + H +T+ + C AV+ PGVA+VWSICGSS+ F ++F LP++ Y++IRA K N R L+AW +LI + ++VLC+ I
Sbjct: 21 ATSYADVCRRAYGPGLELFLTLVLFVFLMFVMVAYMVLVRDIFTPIVSPLATSFMQGEPD----TAAVGDYVLLGIVIAMIPFFLQKDLHALRYNCYVGFVSISVLCVAIAYRAWENYPASSSNGSLNIKMFPSSFVDVLFAFPIPILSFMCQFNVLGIQGSLVNPTRQRIRQIIDGAVAASFVLTFSFGLGGYLYAGDDTNGNILLNFEPGDRVIIVGKVGCGVTITLAMAMMLLPCRETLLALGPQLRAWKQNNNNEISDMKGTEDEEIASIQ-SGTSSG---YGAVSEEM----PLITEAMSGYHHVEAASRLTEILTHVFSTLIIASICYACAVAAPGVAVVWSICGSSLAFIIAFILPSICYIRIRASKKGHGNPRLLSAWALLIFSICSAVLCSVQTI 412
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S4D5B8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5B8_HETAK) HSP 1 Score: 229 bits (583), Expect = 2.990e-65 Identity = 162/476 (34.03%), Postives = 237/476 (49.79%), Query Frame = 1
Query: 4 LKTPEIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQ------------------------------------ASVAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEA-RKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAFNIRKLAAWVMLIVTCFASVLCTYNAIATAASK 1320
L + E I+P+P + R+S AVFNL AT++GGG LSLPY F+Q VAK AFG GG T++L LFV++AY +L+RDI SG++ +G+ + + N VL C++ P C KSLHALR+ CY+GF + +L ++ Y + +N P A ++ + PI++++++CQFN+LSVH+ L +PTR R+K IH ++G IY GY AY +T ++I NF PS+K+++ GR GL +T+L PM++LPCR+ S L + S + A SFD S A RH TV ++ L+ AV IPGVA+VWSI GS++G ++F LPA YLKIR +K N+ K A V+LI + +V C+Y +I A S+
Sbjct: 60 LPSVEFIYPAPVSSGRQSGLAPAVFNLCATILGGGVLSLPYTFAQLGWGLGLVTLIAVALVSDFALYILCSCARRSGMPSYVEVAKHAFGKKGGQLITIMLAVFILFVVVAYQVLIRDIASGIVEFFLGYDLDMDG---------RNKVLYVCVLMIAPLCFFKSLHALRYTCYLGFAAVCLLVGSLVYLGWAFNRAEPSLWATYARPAEASVADFFYVLPILAVSYVCQFNMLSVHSQLKHPTRGRMKTTIHLAIGLATLIYAVGAMAGYSCAYMDTNENIFNNFEPSNKLLLVGRCGLFVTLLCNTPMMVLPCRE------SALLXXXXXXXXXXXXXXXXGPRLEKTQLLGQESQDYSAEAADSFDDGSQRQLGEGGDGGCGGAVRHVAFTVLILGLALYLAVCIPGVAVVWSIAGSTMGLVLAFVLPAACYLKIRWQKKNNLVKKGAMVLLIGSIAFTVFCSYQSIGHALSE 520
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S4VL45_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VL45_9STRA) HSP 1 Score: 229 bits (583), Expect = 2.380e-64 Identity = 168/543 (30.94%), Postives = 249/543 (45.86%), Query Frame = 1
Query: 16 EIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQAS------------------------------------VAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSG----LIGLLVGWFTENEAGEVI----FTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEY---NTEHPEARKQAVAF-TSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNG-------------------------------ELGATGSFDTSSMDANVA----------------AALRRVMKAAR-------------------HFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAFNIRKLAAWVMLIVTCFASVLCTYNAI 1302
E+++P+ + R+S A+ NL+ATV GGG LSLP AF++A VA AFG TT I+ FVL+AYM+L +DIW+ L L+ F + T E SN+VLV L+ P L + LHALRH C+VGF S ++LT+A+ +R + N P+ +Q++ + T S IL AFPI++L+F FN+LSVH +LVNPTR+R+K ++ S+G + +G GY YA +T D+ILLNF SD ++ R+G G T+L +P++ LPCR+A + E + A+K + +G + +NG G+T + + S V AA V+ H +T +++ C F AV++PGVA VWSICGSS+ + F +PA YLKIR++K N R + AW +L + +CT + I
Sbjct: 67 ELLNPTHNSSLRKSSPFIAMLNLVATVCGGGVLSLPLAFARAGIIPASILMVLSALMTDFGIYILCSCARRTGGKSYSDVACAAFGRLAEVFTTTIISAFVCFVLIAYMVLAKDIWTPVLLRLFPQLLSMFASRHGNIQVPNEELTNEASNYVLVVLLLLVTPLLLKRDLHALRHTCFVGFSSLILLTIAVAFRAIQQVQLNALLPKEEQQSINWCTDKFSDILFAFPIIALSFFSSFNVLSVHGALVNPTRKRVKLVLDGSIGICFFFFYIVGLCGYLYARNDTLDNILLNFPLSDNAILLSRIGYGFTLLFGMPLVTLPCREAILSVPEHFQEWREERARAQKYLSMSKVGDERGGKGKHLIINGVDFDEERPLIGRENEKRVPSLLPKHSNMSENSYGSTTNLENSPFVGRVRYFRHMSSMSKKLTVDDAAANGVLDTHHEGDEEHQQHSNPTLSEYFVHISSTAAIVLVCFFTAVAVPGVATVWSICGSSMSIIIGFIVPAGCYLKIRSRKKINPRFVGAWTLLFFSTVTGCVCTTHVI 609
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S4RQ47_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RQ47_9STRA) HSP 1 Score: 222 bits (565), Expect = 4.300e-63 Identity = 158/432 (36.57%), Postives = 226/432 (52.31%), Query Frame = 1
Query: 16 EIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAF------------------------------------SQASVAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFE-YNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLY--------EVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDA-NVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVS 1173
EI++P SRRS + A FNL+AT+VGGG LS+P AF S A V + A+GP TL+L +FV++AYM+LVRDI++ ++ L F + E T ++VL+G +IA +P L K LHALR+ CYVGF S VL VAI YR +E Y F S+ +L AFPI L+FMCQFN+L + SLVNPTR+R++ II ++ A + + G GY YA +T +ILLNF P D+V++ G++G G+T+ +A+ M+LLPCR+ L QL E+ K + + I +G SS Y +++ E+ T +M + A R+ + H +T+ + C AV+ PGVA+VWSICGSS+ VS
Sbjct: 49 EILNPHHDCSSRRSTVLPATFNLVATIVGGGILSVPLAFQKCGLVLTTALMIVSALGTDFSLYILCSSGRRTGATSYADVCRRAYGPGLELFLTLVLFVFLMFVMVAYMVLVRDIFTPIVSPLATSFMQGEPD----TAAVGDYVLLGIVIAMIPFFLQKDLHALRYNCYVGFVSISVLCVAIAYRAWENYPASSSNGSLNIKMFPSSFVDVLFAFPIPILSFMCQFNVLGIQGSLVNPTRQRIRQIIDGAVAASFVLTFSFGLGGYLYAGDDTNGNILLNFEPGDRVIIVGKVGCGVTITLAMAMMLLPCRETLLALGPQLRAWKQNNNNEISDMKGTEDEEIASIQ-SGTSSG---YGAVSEEM----PLITEAMSGYHHVEAASRLTEILTHVFSTLIIASICYACAVAAPGVAVVWSICGSSLVSLVS 468
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S1BVU6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVU6_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.310e-61 Identity = 153/488 (31.35%), Postives = 248/488 (50.82%), Query Frame = 1
Query: 16 EIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQAS------------------------------------VAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTE--NEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLY-------EVVTAKFSARKTTPLISGNGA----SSSRGNYSSLNGELGATGSFDTSSMDANVAAALRR---------VMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAK-KAFNIRKLAAWVMLIVTCFASVLCTYNAI 1302
E++ P + R++ ++A NL+AT+ GGG LSLP AF + VA+ FG T++L + F L+AYM+LVRDIWS + G GE + +LVG + P L +SLH LR+ CY+ F S VL V+I YR F+ + + + +T++ +L A P+ L+F+ +N+LSVH +LV+PTR R++ +I S+G+ ++ A G GY YA +T D+ILLNF P DKV++ G++ GI++ +A+P+++LP R+ F + Q+ E T +++ L+S A SSS G S+ + G+FD + ++ + + ++ H +T+ ++ CL AV+ P VA+VWSICGSS+ F + F PA Y+++R K K N R + AW ML+ + ++++CT+ I
Sbjct: 64 ELLVPCADSSLRKTSRMAATVNLVATIAGGGVLSLPLAFRRTGILVGSLMVVLAAVMSNFSLYILCCCARRTGVSTYGEVARRVFGRKTECGVTIVLFTLLAFFLVAYMVLVRDIWSTVYTFATGRTLSVGPAGGETV--------LLVGVVAMVSPFMLQRSLHPLRYNCYISFASISVLCVSIIYRAFQRGAMTEDFWDKVLWYTTDYRDVLFALPLFVLSFLATYNMLSVHCALVHPTRRRVREVIGGSIGSCCILFYAFGIGGYCYALDHTLDNILLNFDPHDKVIILGKISFGISLTLAMPLVVLPARECFLMIPVQVQAWINETRECQTTLLHSQERARLLSSTRARHPSSSSMGTAVSVT-SFDSEGAFDHDASSLSLGKVIAKPVIETVDPDTLEQIIHMGSTLLVVATCLVAAVAAPRVAVVWSICGSSLAFVIGFIFPAAAYIRLRGKRKGMNPRIVGAWCMLVFSILSAIICTFLTI 542
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: B7GA29_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GA29_PHATC) HSP 1 Score: 214 bits (546), Expect = 5.070e-59 Identity = 165/524 (31.49%), Postives = 247/524 (47.14%), Query Frame = 1
Query: 16 EIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQAS------------------------------------VAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLI-----GLLV--GWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDA--------------------FEELASQLYE------VVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVA---------------------AALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKAFNIRKLAAWVMLIVTCFASVLCTYNAIATAAS 1317
E++ P +Q+R+S + A+ N++ATV GGG LSLP AFS+A VA AFG TT+ L M L+AY +LV+D+W+ ++ GL V G ++ EA SN +L G L+ +P L + LHALRH CYVGF S ++L VA+ +R + H ++++ + L FPI+ L F C +NIL VHA L++PTR ++K +I S+ ++ +G GY YA T D+ILLNF D V+ GR+G T+L +P++LLPCR+A F LA + V F A + + +S R + + L A + T++ AN + L+ + + + TV +++ F A+S+PGVA VWSICGSS+ +++F +P YLKIR K + AAW++LI + A VLCT A+ A S
Sbjct: 102 ELLKPDHSSQARKSSPMVAMINMVATVCGGGVLSLPLAFSKAGILPTTLLMIYGALTTDLSLYLLVACARRTGGRSYGDVAMAAFGSAAQVVTTVTLTTMLCGALIAYQVLVKDVWTPVLLTTVPGLSVSLGKLSDREA---------SNLLLAGILLLAMPLLLKRDLHALRHTCYVGFGSCILLLVAVFFRAAQ-KIRHQSVHAAINWYSTDPADWLFCFPIVVLCFFCSYNILEVHAQLMHPTRLQIKRVIDHSMMICLVLFYTVGLCGYLYAGTATADNILLNFPFQDSAVLAGRIGFCFTLLFGLPLVLLPCREAALSIPAHWRAWRQDVAETRKFRLLARERNNYGAHLIVNGVDFDATEPHLVSKTRHGASLRYGTACIEQTLSADETDGTATNSANSSWTQLVNSDEQGMRTVDSCPNDCFLQSWKEQFSNVVPTVVILLVTYFVAISVPGVAAVWSICGSSMAIWIAFIVPTACYLKIREHKGLTLLASAAWLLLITSAIAMVLCTRQAVQNATS 615
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: K0SQT3_THAOC (Aa_trans domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQT3_THAOC) HSP 1 Score: 206 bits (524), Expect = 1.830e-56 Identity = 147/463 (31.75%), Postives = 226/463 (48.81%), Query Frame = 1
Query: 28 PSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQAS------------------------------------VAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENE---AGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFVSFGLPALFYLKIRAKKA---FNIRKLAAWVMLIVTCFASVLCT 1290
PS SRR+ +A+FN+ AT++GGG LS+P + ++A VA+ AFG TT +L + +F ++ M L + IWS ++ + +G E GE T + VL+ L+ P L + L +LRH+CYVGFFS +L +A+ YR E N+ +++ + L A PI+ A++C FNI+SV SLV PTRER++G+IH ++ + G GY YAY T +ILLNF+P D +++ GR+ GI L A+PM LP R+A +A+Q+ E A+ S ++ L GN SS+ + T N ++ R + H + T G+ C AV PGVA+VW I GSS+ F + F +P Y+K++ + + + AW +LI ++LCT
Sbjct: 77 PSSSCDSRRATLPAAIFNMTATIIGGGVLSIPLSCARAGLGPFTALMAASAIATDFSLYVLVSCSRRCGSTSFGGVARSAFGGGAELLTTAAVLIVVVFSVVGLMKLNQGIWSPILMMTLGILIGGEDPPTGET--TALQDAIVLMVLLVLMTPFLLKRDLTSLRHLCYVGFFSIAILCLAMAYRAVELNSGTDVFATNVKWTSTSLPEALSALPIIMCAYLCSFNIISVSCSLVRPTRERVRGVIHWAVLLSFLVMYLFGVAGYLYAYDETSGNILLNFSPDDPIILLGRVSCGIMTLFALPMNTLPAREALLSVAAQVSE---ARASTNQSASLAERRILLRKAGNNSSIESAREDKIGYGTKDAAENSVVSISRKEEYI-HCLATFGIAFLCYVAAVLAPGVAIVWDISGSSMVFLIQFIIPGACYIKLKLRSRPDELSRNLVLAWCLLIFALIMALLCT 533
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A835YIR5_9STRA (Clathrin light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR5_9STRA) HSP 1 Score: 394 bits (1012), Expect = 4.140e-137 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 3
Query: 81 MDNDSDFFGEDQQTPIDATADITPSAEGYTDFGGDYVGGGYKGGGAEDYQQQQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
MDNDSDFFGEDQQTPIDATADITPSAEGYTDFGGDYVGGGYKGGGAEDYQQQQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA
Sbjct: 1 MDNDSDFFGEDQQTPIDATADITPSAEGYTDFGGDYVGGGYKGGGAEDYQQQQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 204
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: D7G9H3_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9H3_ECTSI) HSP 1 Score: 135 bits (341), Expect = 2.970e-35 Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 3
Query: 309 MAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
M GMPAPE+V +AL FM W+A L EKA+ E AK AL+AA+ D + ER KE +M NR QEQ+FLEQLE +LESENPWER+VSLVDTQ+E FKDTSR+ +++IQLKNDPI S+
Sbjct: 95 MPDMGMPAPEDVEPSALDEFMERWQAGLVEKARIEAEAKAAALEAAKADLETHSVERAANKEAKMGQNREQEQIFLEQLEGELESENPWERVVSLVDTQSEVVEDFKDTSRMTSILIQLKNDPIDTSS 222
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S3Y6V3_HETAK (Clathrin light chain n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6V3_HETAK) HSP 1 Score: 107 bits (267), Expect = 5.080e-24 Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 3
Query: 276 MNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
++ +D G G P + AL FM +WE +L+EK EE A ++A Q A+ + D F+A++E E +M+ NR++EQV LEQLE+DLES+NPWERI +LVD QAE G D SR+++++IQLKN+P+ A
Sbjct: 127 LDATQDMMGGAQMMMGEP---HMMRTALDDFMDKWEQELREKRAVEEQAAEEAKQKAKAELDHFYAQKEKTFEAKMSKNRSEEQVLLEQLEADLESDNPWERITNLVDLQAE--GDDVDKSRMRSILIQLKNEPLEVKA 260
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7R9VTD9_9STRA (Clathrin light chain n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VTD9_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.310e-19 Identity = 54/136 (39.71%), Postives = 84/136 (61.76%), Query Frame = 3
Query: 282 PAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHAS 689
P E G+ + P PEE + + ++ EW+ LKE+ AE AAK +A++AAR + +KF AER+ ++ETRM NR EQ LE +E+DLE++N W+R+V LV+ + D R++ ++I LKN+P A+
Sbjct: 102 PFEAGAAAEDSLLPEPEPEEKGPSPMQKWNDEWQVTLKERKDAENAAKAEAVEAARVELEKFQAERDARRETRMAKNRADEQDKLEAIEADLENDNSWQRVVKLVELTHDTVEGAADVHRMRDVMITLKNEPARAT 237
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: K0S5A2_THAOC (Clathrin light chain n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5A2_THAOC) HSP 1 Score: 92.8 bits (229), Expect = 5.910e-19 Identity = 56/142 (39.44%), Postives = 90/142 (63.38%), Query Frame = 3
Query: 285 AEDGSNGHMAFQGMPAPEEVAD---NALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA*HA 701
A+D G MA PAP +A +A+ ++ EW+ L ++ + E A K ++AAR D +KF AERE ++ETRM NR+ EQ LE +E+DLE++N W+R+V +++ + + DT+R+K +++ LKN+P ASA +A
Sbjct: 81 ADDDDGGLMA----PAPVSMAPPEPSAMQKWNEEWQTTLLQRKEEENALKASQVEAARADIEKFQAEREKRRETRMAKNRSDEQDKLEAIEADLENDNSWQRVVKMIELNQDSADGSADTNRMKDVLVLLKNEPDKASALNA 218
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S2UWZ8_9STRA (Clathrin light chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWZ8_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.460e-18 Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = 3
Query: 324 MPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPI 680
+ PE VA AL F +W+ KL EKA+ E Q+ +Q A+ + DKF+ E+ +++E+R + NR EQ LE+LE+DLE EN WER+ SLVD + D SR+ +I QLK +P+
Sbjct: 88 LEIPEPVARTALDDFEEQWKEKLAEKAELERQTTQETIQKAKQNLDKFYDEKRVQRESRQSKNRQLEQSMLEKLEADLECENAWERVSSLVDLTLDGGEDAPDQSRMVALITQLKREPL 206
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A2D4BVD7_PYTIN (Clathrin light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVD7_PYTIN) HSP 1 Score: 89.7 bits (221), Expect = 1.260e-17 Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 3
Query: 324 MPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQA--------------------EPSGPFK-----DTSRIKTMIIQLKNDPI 680
MPA EE DN LT+FM ++EA++ +KAQ +E + + A+ D D+F ER KKE++ +NR QEQ LE+L +DLESENPWER+VSLVD + EP K D SR++ + +QLK +P+
Sbjct: 91 MPAVEE--DNELTKFMRQYEAEIAQKAQEQEKVGVECKEKAKKDMDQFQTERSRKKESKQQANRVQEQATLEKLAADLESENPWERVVSLVDLEVNRKQKLAALNNKKDAKNKEPEPVKSSKKEDEEDLSRMRQLFVQLKAEPL 232
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A7S2RJR1_9STRA (Clathrin light chain n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RJR1_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.000e-17 Identity = 50/131 (38.17%), Postives = 82/131 (62.60%), Query Frame = 3
Query: 309 MAFQGMPAPEEVADNALT---RFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
M +P PE + T ++ EW L+E+ AE AAK + ++AA+ + ++F ERE+K+ET+M +NR+ EQ LE +E+DLE++N W+R+V +V+ + + D SR+K ++I LKN+P A A
Sbjct: 99 MTEDNLPEPEAAEPDETTPMAKWNQEWTVTLRERKDAENAAKGEHVEAAQAELERFQTEREVKRETKMTNNRSDEQEKLEAIEADLENDNSWQRVVKMVELNHDAAEGSLDVSRMKDVMIFLKNEPSRAIA 229
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A812V5R7_SYMMI (Clathrin light chain n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V5R7_SYMMI) HSP 1 Score: 83.6 bits (205), Expect = 4.040e-16 Identity = 47/125 (37.60%), Postives = 79/125 (63.20%), Query Frame = 3
Query: 321 GMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAE-PSGPFK-DTSRIKTMIIQLKNDPIHAS 689
GMP PE ++AL++F EW +L+EK + E+AA+++A A + + A+R+ + + NR++EQV LEQLESDL+ N W+R+ L++ + P P + D SR++ + I LKN+P+ +
Sbjct: 27 GMPEPE--VEDALSKFNREWNERLEEKKRKEDAAEEEAKATAAEELANYLAQRQTRMSAKKEVNRSEEQVLLEQLESDLDGANVWDRVSKLIEAGVDVPDDPDRADVSRMRKLFIHLKNEPLETT 149
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Match: A0A8K1CW16_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW16_PYTOL) HSP 1 Score: 84.0 bits (206), Expect = 1.560e-15 Identity = 56/144 (38.89%), Postives = 78/144 (54.17%), Query Frame = 3
Query: 324 MPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQ--------------------AEPSGPFK-----DTSRIKTMIIQLKNDPI 680
M P +N LT+FM ++E ++ KAQ +E + + A+ D ++F AER KE++ SNR QEQ LE+L DLESENPWER+VSLVD + AE P K D SR++ + +QLK DP+
Sbjct: 81 MSVPVIEEENELTKFMRKYEGEIAAKAQEQEKVGVECKEKAKHDMEQFTAERSRIKESKQQSNRVQEQATLEKLALDLESENPWERVVSLVDLETNRKQKLAALNAKKDGKNKEAEAPKPVKKEEEEDVSRMRQLFVQLKADPL 224 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351514 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|351514 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14616 ID=mRNA_14616|Name=jgi.p|Trimin1|351514|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1488bp|location=Sequence derived from alignment at Contig_92:483932..492934- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTCAAGACCCCGGAGATCATCCACCCCAGCCCTGGCAACCAGAGCCGback to top protein sequence of jgi.p|Trimin1|351514 >Trimin1|351514|estExt_Genemark1.C_Ctg_920046 ID=Trimin1|351514|estExt_Genemark1.C_Ctg_920046|Name=jgi.p|Trimin1|351514|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=442bp MLKTPEIIHPSPGNQSRRSDTVSAVFNLIATVVGGGTLSLPYAFSQASVAback to top mRNA from alignment at Contig_92:483932..492934- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14616 ID=mRNA_14616|Name=jgi.p|Trimin1|351514|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9003bp|location=Sequence derived from alignment at Contig_92:483932..492934- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_92:483932..492934- >mRNA_14616 ID=mRNA_14616|Name=jgi.p|Trimin1|351514|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1326bp|location=Sequence derived from alignment at Contig_92:483932..492934- (Tribonema minus UTEX_B_3156 )back to top |