mRNA_11406 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351417
Unique Name	mRNA_11406
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351417 vs. uniprot
Match: A0A835YHH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH8_9STRA)

HSP 1 Score: 762 bits (1968), Expect = 2.710e-270
Identity = 536/538 (99.63%), Postives = 536/538 (99.63%), Query Frame = 3

Query:  174 MRRSLIDSKAAIQTHGQGRCCWSPERCVAAXXXXXXSPEGNSRRKGSCLCCGRTGTIPQTAASKAAKPLRRAMLPPRMQMWALEGLCLVETSKRPKLSVHFAEDPTVVLGYADPDYDRRSIKVDLTRTPYALFHKDYYLMNRPAEYSPKHTGKEGRSSSLSDDEEELHTEGEGSSSDDEARAEEVVRQKRMISLERRRALRPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARNSGALSAKPSTPRGGKPAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLKPAFFAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASACGGSGEAGTCDTAXXXXXAPVAALSEALAQLKC 1787
            MRRSLIDSKAAIQTHGQGRCCWSPERCVAAXXXXXXSPEGNSRRKGSCLCCGRTGTIPQTAASKAAKPLRRAMLPPRMQMWALEGLCLVETSKRPKLSVHFAEDPTVVLGYADPDYDRRSIKVDLTRTPYALFHKDYYLMNRPAEYSPKHTGKEGRSSSLSDDEEELHTEGEGSSSDDEARAEEVVRQKRMISLERRRALRPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARNSGALSAKPSTPRGGKPAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLKPAFFAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASACGGSGEAGTCDTAXXXXX  VAALSEALAQLKC
Sbjct:    1 MRRSLIDSKAAIQTHGQGRCCWSPERCVAAXXXXXXSPEGNSRRKGSCLCCGRTGTIPQTAASKAAKPLRRAMLPPRMQMWALEGLCLVETSKRPKLSVHFAEDPTVVLGYADPDYDRRSIKVDLTRTPYALFHKDYYLMNRPAEYSPKHTGKEGRSSSLSDDEEELHTEGEGSSSDDEARAEEVVRQKRMISLERRRALRPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARNSGALSAKPSTPRGGKPAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLKPAFFAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASACGGSGEAGTCDTAXXXXXXXVAALSEALAQLKC 538

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BLAST of jgi.p|Trimin1|351417 vs. uniprot
Match: A0A836CAN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN9_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.090e-55
Identity = 140/299 (46.82%), Postives = 165/299 (55.18%), Query Frame = 3

Query:  528 RSIKVDLTRTPYALFHKDYYLMNRPAEYSPKHT-GKEGRSSS--LSDDEEELHTEGEGSSSDDE---ARA--------------------EEVVRQKRMISLERRR---ALRPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRIT 1337
            RS++VDL+R+PYALFHKD+Y    P EYSPK +  +EG  +    S DEE+L TEGE SSS+D+   AR                           +R  S E RR   A RP+FSG+WKR+R+EGFIELLAFSGVPRKAAL+AAQ+R VHIIDHDDDYFRLI+KNGL K D HYII      EK         L +            +  +                                          AA +EMIAVRTLEDGG  LVLQQIVR+PATGEEARARHIFKR+T
Sbjct:   16 RSVEVDLSRSPYALFHKDFYFKTHPQEYSPKSSRAREGAHAPNWTSSDEEDLATEGELSSSEDDDCGARGGGSSXXXXXXXXXXXXXXXXXXXAMHRRTPSAELRRRAAAARPDFSGVWKRARVEGFIELLAFSGVPRKAALSAAQRRAVHIIDHDDDYFRLIVKNGLTKVDGHYII------EK---------LKFXXXXXXXXXXXXIAAA------------------------------------------AAPLEMIAVRTLEDGGATLVLQQIVRRPATGEEARARHIFKRLT 257

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BLAST of jgi.p|Trimin1|351417 vs. uniprot
Match: D7G864_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G864_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 7.440e-37
Identity = 122/381 (32.02%), Postives = 169/381 (44.36%), Query Frame = 3

Query:  441 ETSKRPKLSVHFAEDPTVVLGYADP--DYDRRSIKVDLTRTPYALFHKDYYLMNR----------------PA-----------------------------------EYSPKHTGKEGRS----------SSLSDDEEELHT--EGEGSSSDDEARAEE--------------VVRQKRMISLERRRALRPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARN 1346
            E    P+ +V F   P   +  AD   DY+RRSI VDL++TP+ALF +D  +M +                PA                                   + SP     E R            S S +  E HT  E + + +D  + A++              VV Q+++       A  P F G+WKR+  EG+ ELL  SGVP++A   A +K PVHIIDHD  YFRLI+KNGL K D  + IGDEP+ +  G   YEV ++W H + +GR + L LTSI   A                                         E+IA+R+L +GGD +VL QIVR+PA G E RA+H FKR+T+++
Sbjct:   67 ELDASPRRTVRFPHQPISAIWVADSVLDYNRRSIVVDLSKTPFALFRRDAVMMKQARTSVDPSAPLPPPGPPALSPPRLRAAAAACXXXXXXXXXRSPVGSSDAAADSDASPSPPSAERRRPGGDRLAKLWESESSESSEGHTDLETDDTETDWHSDADDCCSVGSGTEEAPPCVVEQQQLRRGSNSEAGSPAFYGVWKRTSSEGYEELLLSSGVPKRAVAMAMKKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPKQDIIGKQSYEVSMNWAHLSGHGREDELALTSICHQAGE---------------------------------------EVIAIRSLHEGGDQMVLTQIVRRPAEGYEVRAKHFFKRVTSKS 408

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BLAST of jgi.p|Trimin1|351417 vs. uniprot
Match: A0A835ZCE6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 8.450e-20
Identity = 68/137 (49.64%), Postives = 73/137 (53.28%), Query Frame = 3

Query:  993 KSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARNSGALSAKPSTPRGGKPAVA 1403
            K+  TDYEVVLDWGHGTANG AE LVL S++ NAK GG  S                              AAAIE+IAVRTLEDGGDVLVL Q    P   +  RA HI  R   R  G    KP  PRG KPAVA
Sbjct:   55 KTSTTDYEVVLDWGHGTANGPAEPLVLASVTFNAKAGGDSSGGG---------------------------AAAIELIAVRTLEDGGDVLVLHQTGEWPIIRKRMRAPHIQARRRPR--GTHVVKPCMPRGRKPAVA 162

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351417 vs. uniprot

BLAST of jgi.p|Trimin1|351417 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835YHH8_9STRA	2.710e-270	99.63	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAN9_9STRA	1.090e-55	46.82	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7G864_ECTSI	7.440e-37	32.02	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835ZCE6_9STRA	8.450e-20	49.64	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_90	contig	Contig_90:64855..68676 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351417\|estExt_Genemark1.C_Ctg_900009
Hectar predicted targeting category	other localisation
TranscriptId	351739
Track	FilteredModels1
ProteinId	351417

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351417	gene_11406	Tribonema minus UTEX_B_3156	gene	Contig_90 64855..68676 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351417	Trimin1\|351417\|estExt_Genemark1.C_Ctg_900009	Tribonema minus UTEX_B_3156	polypeptide	Contig_90 65028..68506 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11406_1	exon_11406_1	Tribonema minus UTEX_B_3156	exon	Contig_90 64855..65579 +
exon_11406_2	exon_11406_2	Tribonema minus UTEX_B_3156	exon	Contig_90 67004..67250 +
exon_11406_3	exon_11406_3	Tribonema minus UTEX_B_3156	exon	Contig_90 67605..68676 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_11406	UTR5_11406	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_90 64855..65027 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11406	CDS_11406	Tribonema minus UTEX_B_3156	CDS	Contig_90 65028..65579 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11406	UTR3_11406	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_90 68507..68676 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_90:64855..68676+
coding sequence from alignment at Contig_90:64855..68676+

spliced messenger RNA

>mRNA_11406 ID=mRNA_11406|Name=jgi.p|Trimin1|351417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2044bp|location=Sequence derived from alignment at Contig_90:64855..68676+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TAAAAACAGACACACACACCCGAGAAGCTGAAGGGAGACTGGCAGAAAAT
GACCGCCAGTGTAGGCATGATACCATCTTTGATGTAACCCTGACTTCTAG
CGCGGCGACAAACGAGGACGGCTCGCTTCCACCCTGTCAACTGGTTGAAT
TAGCCCCGTCAGCGTCTGCAAAGATGAGGCGATCGCTGATAGATTCCAAG
GCGGCGATTCAGACGCATGGCCAGGGGAGGTGCTGCTGGTCCCCGGAGCG
CTGCGTGGCAGCAGCGGCGGCGGCGGCGGCGTCGCCAGAAGGCAACTCCA
GGCGGAAGGGAAGCTGCTTGTGCTGTGGCCGGACAGGCACGATCCCGCAG
ACTGCAGCTAGCAAGGCGGCTAAGCCTCTGAGGCGTGCCATGCTGCCCCC
TAGGATGCAGATGTGGGCGCTGGAGGGCCTGTGCTTGGTGGAGACGTCAA
AACGTCCCAAGCTGTCTGTGCACTTCGCAGAGGACCCTACCGTAGTCTTG
GGGTACGCCGACCCGGACTATGACAGGCGAAGCATCAAGGTCGACCTAAC
AAGGACCCCCTATGCTTTGTTTCACAAGGATTATTATCTCATGAACAGGC
CTGCCGAGTACAGCCCAAAGCATACAGGGAAGGAGGGCAGGTCGAGCAGC
CTCAGCGACGACGAGGAGGAATTACATACGGAGGGGGAGGGAAGCAGCAG
CGACGATGAAGCCAGGGCAGAGGAGGTGGTGCGCCAGAAGCGCATGATCT
CGCTGGAGCGGCGGCGCGCGCTGCGGCCCAACTTCAGCGGCATCTGGAAG
CGCTCGCGCATCGAGGGCTTCATTGAGCTGCTGGCGTTCAGCGGCGTGCC
GCGCAAGGCAGCGCTCGCTGCAGCGCAGAAGCGCCCCGTACACATCATCG
ACCACGACGACGACTACTTCCGCCTCATCATCAAGAACGGCCTCGTCAAG
TCGGACGCGCACTACATCATAGGCGATGAGCCGCGCATTGAGAAGTCCGG
CGCCACGGACTACGAAGTCGTGCTCGACTGGGGCCACGGCACCGCCAACG
GCCGTGCAGAGTCTCTTGTCCTCACCAGCATCAGCGTCAACGCCAAGACG
GGCGGCAGCGACAGCAACGGCAGCGGCGGCGGCGGCGGCAGCAGCGACGG
CGGCGGCAGCGACGGCGGCGGCGGCAGCGGCGGCGGCAGCAGCGGCAGCG
GCGGCGCCGCGGCCATCGAGATGATCGCCGTGCGCACCCTGGAGGACGGC
GGCGACGTCCTTGTCCTGCAGCAGATCGTGCGCAAGCCCGCAACGGGCGA
GGAGGCGCGCGCGCGCCACATCTTCAAGCGCATCACCGCGCGCAACAGCG
GCGCGCTGTCCGCCAAGCCGAGCACGCCGCGCGGCGGCAAGCCCGCGGTC
GCCGTCGCGGCGGCGGTCGCGGCGGCGGCGGAGGCGGCGGCGGCGGCGTG
CGACAGCAGCACGGAGGGCGCCGAGTGCGAAGCGGCGGCGGCGGCGGCGG
CGGTGGCGGTGGCGACCCAGTTGAAGCCCGCATTTTTTGCGGCGCCCGCA
GCGGCGACGGCGGCAGAGGCGGAGGTGCCGGCAGCGCAGGAGGACGCGGC
GGCGGCGGCGGCGCAGGGCGAGGAGCAGGATGCGGCAGCGGCAGCGGCAG
CGGCGGCGGCGGCGGCCGCTGCGGCGGTGGCCAGCGCGTGCGGCGGAAGC
GGCGAGGCGGGCACTTGCGACACGGCAGCGGCAGCGCAGGCAGCGCCCGT
CGCCGCGCTGAGCGAGGCGCTGGCTCAGCTCAAGTGCGCAGGAAGCGCTG
TGGCTGCGGCGGCCCCTGCTGCGGGCGGGGGCGAGGCTGGCGCTCCGATG
GTGGTGTCTGCAAGCCAGGCGTAGCCCGACAGCAGCGTTCGGGGGCCGGC
GGATCGGGGGGTGATGGTTGGGAAACAGCGGTTTTGCTTGGCAAGATCTT
GATCGGTGGGCAGCAGCGGGCGTGCGGCGCGGCGCGCGCGCTGCCGGTTG
CGGTGGCGCATCGCAAACCTAACGGTTTGTAGGTGCCCTGGTAC

protein sequence of jgi.p|Trimin1|351417

>Trimin1|351417|estExt_Genemark1.C_Ctg_900009 ID=Trimin1|351417|estExt_Genemark1.C_Ctg_900009|Name=jgi.p|Trimin1|351417|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=567bp
MRRSLIDSKAAIQTHGQGRCCWSPERCVAAAAAAAASPEGNSRRKGSCLC
CGRTGTIPQTAASKAAKPLRRAMLPPRMQMWALEGLCLVETSKRPKLSVH
FAEDPTVVLGYADPDYDRRSIKVDLTRTPYALFHKDYYLMNRPAEYSPKH
TGKEGRSSSLSDDEEELHTEGEGSSSDDEARAEEVVRQKRMISLERRRAL
RPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFR
LIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVL
TSISVNAKTGGSDSNGSGGGGGSSDGGGSDGGGGSGGGSSGSGGAAAIEM
IAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARNSGALSAKPS
TPRGGKPAVAVAAAVAAAAEAAAAACDSSTEGAECEAAAAAAAVAVATQL
KPAFFAAPAAATAAEAEVPAAQEDAAAAAAQGEEQDAAAAAAAAAAAAAA
AVASACGGSGEAGTCDTAAAAQAAPVAALSEALAQLKCAGSAVAAAAPAA
GGGEAGAPMVVSASQA*

mRNA from alignment at Contig_90:64855..68676+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11406 ID=mRNA_11406|Name=jgi.p|Trimin1|351417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3822bp|location=Sequence derived from alignment at Contig_90:64855..68676+ (Tribonema minus UTEX_B_3156 )
TAAAAACAGACACACACACCCGAGAAGCTGAAGGGAGACTGGCAGAAAAT
GACCGCCAGTGTAGGCATGATACCATCTTTGATGTAACCCTGACTTCTAG
CGCGGCGACAAACGAGGACGGCTCGCTTCCACCCTGTCAACTGGTTGAAT
TAGCCCCGTCAGCGTCTGCAAAGATGAGGCGATCGCTGATAGATTCCAAG
GCGGCGATTCAGACGCATGGCCAGGGGAGGTGCTGCTGGTCCCCGGAGCG
CTGCGTGGCAGCAGCGGCGGCGGCGGCGGCGTCGCCAGAAGGCAACTCCA
GGCGGAAGGGAAGCTGCTTGTGCTGTGGCCGGACAGGCACGATCCCGCAG
ACTGCAGCTAGCAAGGCGGCTAAGCCTCTGAGGCGTGCCATGCTGCCCCC
TAGGATGCAGATGTGGGCGCTGGAGGGCCTGTGCTTGGTGGAGACGTCAA
AACGTCCCAAGCTGTCTGTGCACTTCGCAGAGGACCCTACCGTAGTCTTG
GGGTACGCCGACCCGGACTATGACAGGCGAAGCATCAAGGTCGACCTAAC
AAGGACCCCCTATGCTTTGTTTCACAAGGATTATTATCTCATGAACAGGC
CTGCCGAGTACAGCCCAAAGCATACAGGGAAGGAGGGCAGGTCGAGCAGC
CTCAGCGACGACGAGGAGGAATTACATACGGAGGGGGAGGGAAGCAGCAG
CGACGATGAAGCCAGGGCAGAGGAGGTGGGTTTGCTCATTTGCATACGGC
ACATTCTACAACTGTCGGCTTGATCGCTCGAGTCGCGACCTCAGAGAGCA
GACACGTCAGGCTCTGGCGCTAGACGGAGCGATGCATTACCATTCTACAA
GAATTTGTTACATCCCCACCTCGAACAGGAGTTGTGTCATCTGTGGGCTT
TCCGGCTGATATCTCTACTGTAGTAGTCACGTAGAGACACATGAGGAGGC
ACTTTGACTGCGAACGTGTGCTCGCATACGGGATTTGCCTGAAAACGGTT
TCGAATTGTGCACACAAAGTGCCCTGGCTGCCACCGGCACACGTGAAGGG
TGATTTGAATCTCTGTCCACCTCTGCTCCTCTCAAGCTAACGCAACACTT
TAGGCTGCAATGAGCTGCACAGTTGCTTTCTGATGACTCTGCATCAGTAA
CCATTCGCGAAGGCTCTGGTGATGCCATTGAGCAGGTATTGATATAAGAC
ATTGCAACAATGCAAACGCTTGCCGCAGTAGCCTTTGGCACTGCCATATC
AATGGGTGCATTATGCTAGGCGCCCAGGCCGGCTTCAGAACATGACACTT
GTGCACCCGTGACAACAACGGGCCAGTGCTTGCCCTGAGGTAACGAAGCA
CTTGACAGGCAGTGCAGCTGCACGACATTGGCTTCACTTTGGCATAGAAC
AGTTGATCAGTAGCGGCATGTGGAGGAGCTGAGCCTGCAAATGCAGCAGC
AGGTACGGTGCCGCAACAAGCAGTCCTAACCGTGAGCACATTCATTGGTT
ACGGTAATGGGGGAGTATGTCATACAGCGTTCGTCCATCCATAAGCACAT
GCTCATTCATTCACTTCAGGGGCAAATATGCTTTCACACTGAGGGCGATG
AGGTCAAACTTTGAAAGTGTGGCCATCAGCACTGACACACGCCGGCTGTG
TGCACAACAATTGATGCTGACCTGCATATGGTGGCAAGCAATGGATGGTT
TCAGTTATTATGTAATGATGCGACATCTTTGCTGTTGCGTTCAATTGCAC
ACAGTGCATGCTTAGTGACTAAGTAGGACGATTTCTTGATAGCGATGATA
TGGAGCAGTGGTGCCATTGAGCGGAAAACGTTGCTGACACAACGCACACA
CTGCATGACCGCATACAAGTATCCTATCCGGTGCTGGTCCGGATGTTGAA
AACATGTTCTCTGCATGTACAAGTCTGCTGTCTCAGGGTTAGGATTAGGG
TGAGAGCTGTCCCATTACGTGACGCACATTCACGTCACCATTCGCTCCAG
ATCATCCGCTGCTGTTCGGGACGACCAGCTAGCCTCATACTTCATACACA
ACACTGCCTAACACCATGAGTACCGCATAATCCCCCCCCCCCCTCCCTCC
CCATTGTCTAACTATCTTAACACCGCGTAACCCCCCCCCCCCGCGCCAGG
TGGTGCGCCAGAAGCGCATGATCTCGCTGGAGCGGCGGCGCGCGCTGCGG
CCCAACTTCAGCGGCATCTGGAAGCGCTCGCGCATCGAGGGCTTCATTGA
GCTGCTGGCGTTCAGCGGCGTGCCGCGCAAGGCAGCGCTCGCTGCAGCGC
AGAAGCGCCCCGTACACATCATCGACCACGACGACGACTACTTCCGCCTC
ATCATCAAGAACGGCCTCGTCAAGTCGGACGCGCACTACATCATAGGTGG
GTTGTGGCGGCGCGCCATGCTGGGTATGCAAGGTCGTACATAGTATGGGA
GGTACTTGTTGGCAATGCTGACGCGCCGGCAGTGTTGAAGTTCAACTTCA
AGCGGTTTGTTGAGAACATACTGGTGAAGCCAGCGTGCGCTTTACCATGA
CATTTGTATCCAGTTGTGGCCTATCGCTGTTGCATTGACGTATGGTACGT
CATCTGCACTACATAGCACGCACCGGTGCGGAGCGTGTCACTTGTCGTGG
TCCGGCCATTCCGATGCACACGTCACGGTCAACCACGCTCACAGTACAAC
CCACAAGCCCCCCTTTTCTCACCTCGCCAACCCTCGTCCACCCCCCACAG
GCGATGAGCCGCGCATTGAGAAGTCCGGCGCCACGGACTACGAAGTCGTG
CTCGACTGGGGCCACGGCACCGCCAACGGCCGTGCAGAGTCTCTTGTCCT
CACCAGCATCAGCGTCAACGCCAAGACGGGCGGCAGCGACAGCAACGGCA
GCGGCGGCGGCGGCGGCAGCAGCGACGGCGGCGGCAGCGACGGCGGCGGC
GGCAGCGGCGGCGGCAGCAGCGGCAGCGGCGGCGCCGCGGCCATCGAGAT
GATCGCCGTGCGCACCCTGGAGGACGGCGGCGACGTCCTTGTCCTGCAGC
AGATCGTGCGCAAGCCCGCAACGGGCGAGGAGGCGCGCGCGCGCCACATC
TTCAAGCGCATCACCGCGCGCAACAGCGGCGCGCTGTCCGCCAAGCCGAG
CACGCCGCGCGGCGGCAAGCCCGCGGTCGCCGTCGCGGCGGCGGTCGCGG
CGGCGGCGGAGGCGGCGGCGGCGGCGTGCGACAGCAGCACGGAGGGCGCC
GAGTGCGAAGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGCGACCCAGTT
GAAGCCCGCATTTTTTGCGGCGCCCGCAGCGGCGACGGCGGCAGAGGCGG
AGGTGCCGGCAGCGCAGGAGGACGCGGCGGCGGCGGCGGCGCAGGGCGAG
GAGCAGGATGCGGCAGCGGCAGCGGCAGCGGCGGCGGCGGCGGCCGCTGC
GGCGGTGGCCAGCGCGTGCGGCGGAAGCGGCGAGGCGGGCACTTGCGACA
CGGCAGCGGCAGCGCAGGCAGCGCCCGTCGCCGCGCTGAGCGAGGCGCTG
GCTCAGCTCAAGTGCGCAGGAAGCGCTGTGGCTGCGGCGGCCCCTGCTGC
GGGCGGGGGCGAGGCTGGCGCTCCGATGGTGGTGTCTGCAAGCCAGGCGT
AGCCCGACAGCAGCGTTCGGGGGCCGGCGGATCGGGGGGTGATGGTTGGG
AAACAGCGGTTTTGCTTGGCAAGATCTTGATCGGTGGGCAGCAGCGGGCG
TGCGGCGCGGCGCGCGCGCTGCCGGTTGCGGTGGCGCATCGCAAACCTAA
CGGTTTGTAGGTGCCCTGGTAC

Coding sequence (CDS) from alignment at Contig_90:64855..68676+

>mRNA_11406 ID=mRNA_11406|Name=jgi.p|Trimin1|351417|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1701bp|location=Sequence derived from alignment at Contig_90:64855..68676+ (Tribonema minus UTEX_B_3156 )
ATGAGGCGATCGCTGATAGATTCCAAGGCGGCGATTCAGACGCATGGCCA
GGGGAGGTGCTGCTGGTCCCCGGAGCGCTGCGTGGCAGCAGCGGCGGCGG
CGGCGGCGTCGCCAGAAGGCAACTCCAGGCGGAAGGGAAGCTGCTTGTGC
TGTGGCCGGACAGGCACGATCCCGCAGACTGCAGCTAGCAAGGCGGCTAA
GCCTCTGAGGCGTGCCATGCTGCCCCCTAGGATGCAGATGTGGGCGCTGG
AGGGCCTGTGCTTGGTGGAGACGTCAAAACGTCCCAAGCTGTCTGTGCAC
TTCGCAGAGGACCCTACCGTAGTCTTGGGGTACGCCGACCCGGACTATGA
CAGGCGAAGCATCAAGGTCGACCTAACAAGGACCCCCTATGCTTTGTTTC
ACAAGGATTATTATCTCATGAACAGGCCTGCCGAGTACAGCCCAAAGCAT
ACAGGGAAGGAGGGCAGGTCGAGCAGCCTCAGCGACGACGAGGAGGAATT
ACATACGGAGGGGGAGGGAAGCAGCAGCGACGATGAAGCCAGGGCAGAGG
AGGTGGTGCGCCAGAAGCGCATGATCTCGCTGGAGCGGCGGCGCGCGCTG
CGGCCCAACTTCAGCGGCATCTGGAAGCGCTCGCGCATCGAGGGCTTCAT
TGAGCTGCTGGCGTTCAGCGGCGTGCCGCGCAAGGCAGCGCTCGCTGCAG
CGCAGAAGCGCCCCGTACACATCATCGACCACGACGACGACTACTTCCGC
CTCATCATCAAGAACGGCCTCGTCAAGTCGGACGCGCACTACATCATAGG
CGATGAGCCGCGCATTGAGAAGTCCGGCGCCACGGACTACGAAGTCGTGC
TCGACTGGGGCCACGGCACCGCCAACGGCCGTGCAGAGTCTCTTGTCCTC
ACCAGCATCAGCGTCAACGCCAAGACGGGCGGCAGCGACAGCAACGGCAG
CGGCGGCGGCGGCGGCAGCAGCGACGGCGGCGGCAGCGACGGCGGCGGCG
GCAGCGGCGGCGGCAGCAGCGGCAGCGGCGGCGCCGCGGCCATCGAGATG
ATCGCCGTGCGCACCCTGGAGGACGGCGGCGACGTCCTTGTCCTGCAGCA
GATCGTGCGCAAGCCCGCAACGGGCGAGGAGGCGCGCGCGCGCCACATCT
TCAAGCGCATCACCGCGCGCAACAGCGGCGCGCTGTCCGCCAAGCCGAGC
ACGCCGCGCGGCGGCAAGCCCGCGGTCGCCGTCGCGGCGGCGGTCGCGGC
GGCGGCGGAGGCGGCGGCGGCGGCGTGCGACAGCAGCACGGAGGGCGCCG
AGTGCGAAGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGCGACCCAGTTG
AAGCCCGCATTTTTTGCGGCGCCCGCAGCGGCGACGGCGGCAGAGGCGGA
GGTGCCGGCAGCGCAGGAGGACGCGGCGGCGGCGGCGGCGCAGGGCGAGG
AGCAGGATGCGGCAGCGGCAGCGGCAGCGGCGGCGGCGGCGGCCGCTGCG
GCGGTGGCCAGCGCGTGCGGCGGAAGCGGCGAGGCGGGCACTTGCGACAC
GGCAGCGGCAGCGCAGGCAGCGCCCGTCGCCGCGCTGAGCGAGGCGCTGG
CTCAGCTCAAGTGCGCAGGAAGCGCTGTGGCTGCGGCGGCCCCTGCTGCG
GGCGGGGGCGAGGCTGGCGCTCCGATGGTGGTGTCTGCAAGCCAGGCGTA
G