mRNA_13677 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|336946
Unique NamemRNA_13677
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A836C8D7_9STRA (CMP/dCMP-type deaminase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D7_9STRA)

HSP 1 Score: 509 bits (1310), Expect = 2.280e-181
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIEDLDIDLVKVVDTEQRIRRREKLGRDNEDWARVRDLRADKRMRRLAKNEAVRNTAVAESAVSMPATPAASGLVAPAERGHPSNGDAIAMPAALQDTQQPPLEGEGGAASAAESTEQSAAAV 810
            LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIEDLDIDLVKVVDTEQRIRRREKLGRDNEDWARVRDLRADKRMRRLAKNEAVRNTAVAESAVSMPATPAASGLVAPAERGHPSNGDAIAMPAALQDTQQPPLEGEGGAASAAESTEQSAAAV
Sbjct:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIEDLDIDLVKVVDTEQRIRRREKLGRDNEDWARVRDLRADKRMRRLAKNEAVRNTAVAESAVSMPATPAASGLVAPAERGHPSNGDAIAMPAALQDTQQPPLEGEGGAASAAESTEQSAAAV 270
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: C1MT26_MICPC (Cytidine deaminase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MT26_MICPC)

HSP 1 Score: 127 bits (319), Expect = 1.330e-31
Identity = 86/205 (41.95%), Postives = 116/205 (56.59%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEG--------ASAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIEDLDIDLVKVVDTEQRIRRREKLGRDNEDWARVRDLRAD-KRMRRLAK 588
            L  YGW+W P+ +VDEN +DL  LV+RNSTC +G +GC LVRG+ RG   G  +      G+V++ T N+ L     SD HAEANAVA  AA+GI+L G         S YV   PC +CY LLA+AG+ RIV   +     D  D R       S + LD++ V   DTE+R   R  LG+ +E+   +R  R + KR++R  K
Sbjct:   39 LSRYGWRWRPSDTVDENYVDLVSLVSRNSTCADGHMGCALVRGIARG---GGGERRETAVGDVVLTTINSPLFGALRSDCHAEANAVAEAAARGISLRGNGDDATTVTSCYVTRAPCLSCYKLLASAGVGRIVAPRLM----DSADARA------SAKKLDVECVACEDTEERRAHRLGLGKTHENMDEIRARREERKRLKREGK 230
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: R1DJG1_EMIHU (CMP/dCMP-type deaminase domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJG1_EMIHU)

HSP 1 Score: 123 bits (308), Expect = 1.440e-29
Identity = 89/247 (36.03%), Postives = 117/247 (47.37%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRG------------PLTGLHQSLGQ------------------------VCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIEDLDIDLVKVVDTEQRIRRREKLGRDNEDWARVRDLRADKRMRRLAKNEAVRNTAVAESAVS 633
            L  YGW W    SVD NLLDLA+LVARNSTC +G +GC+L RG+P G            P+  +  +                           +C +V++  TN  L     SD HAEA AV+ CA +GI   G S YV   PC  CY LLA AG+ RIV            ++    D   S   L I+ + + D+ QR   RE LG  NED+ RVR LR +++  RL K  +    + A +A S
Sbjct:   27 LNLYGWSWSSERSVDANLLDLAYLVARNSTCKDGHMGCVLARGVPNGRGGETAAALARDPVNSVAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXLCPSVVLCATNAPLFGAHRSDCHAEALAVSECARRGIGTAGLSIYVTRTPCGPCYKLLAAAGVARIVAP---------NERMASADCAASAARLGIEYIWLPDSPQRAAEREALGSANEDYERVRALREERK--RLRKERSYGRKSCARTAAS 262
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A7S3RZ63_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RZ63_EMIHU)

HSP 1 Score: 106 bits (264), Expect = 7.860e-24
Identity = 64/161 (39.75%), Postives = 79/161 (49.07%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRG------------PLTGLHQSLGQ------------------------VCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIV 375
            L  YGW W    SVD NLLDLA+LVARNSTC +G +GC+L RG+P G            P+  +  +                           +C +V++  TN  L     SD HAEA AV+ CA +GI   G S YV   PC  CY LLA AG+ RIV
Sbjct:   36 LNLYGWSWSSERSVDANLLDLAYLVARNSTCKDGHMGCVLARGVPNGRGGETAAALARDPVNSVAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXLCPSVVLCATNAPLFGAHRSDCHAEALAVSECARRGIGTAGLSIYVTRTPCGPCYKLLAAAGVARIV 196
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A7S0CSB4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSB4_9EUKA)

HSP 1 Score: 98.6 bits (244), Expect = 6.540e-21
Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTR 381
            LK++ W+ D  +S DENL+ LA +VARNS C+ G +GC+L +                    +I    N+ L    ASD HAE NA+ +CA K  + +GA+ YV +PPC+ C+T L  +GI RIVTR
Sbjct:   24 LKTWEWKRDEKLSQDENLMRLALVVARNSDCIGGHMGCILTQQ-----------------NKIIAKAVNSSLFDAYASDIHAEVNALGVCARKQRSTQGATCYVTMPPCRKCFTCLVASGITRIVTR 133
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A813HT72_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HT72_POLGL)

HSP 1 Score: 99.0 bits (245), Expect = 1.180e-20
Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELLRKRA----SDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIEDLDIDLVKVVDTEQRIRRREKLGRDN 528
            ++S+GW   P +S DEN +DLA L+ARNS C  G +GC                ++    G VI    N  L    A    SD HAE NA+ LCA +G + EG++ YV +PPCK C+  +  AGIRRIVTR    +    +D +   D+      L I +  V DTE R +R ++L  ++
Sbjct:   25 IQSFGWAPLPELSGDENGMDLALLLARNSRCKAGSMGC----------------AIADPGGTVIAGHVNGPLWEPNAKRPCSDLHAEVNAIGLCARRGFSTEGSTLYVTMPPCKRCFMQITAAGIRRIVTR----KEIMAQDAK---DVTSVARRLGIAVAVVADTEVRRKRLDRLANES 181
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A7R9ZXB1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7R9ZXB1_9DINO)

HSP 1 Score: 96.3 bits (238), Expect = 2.700e-20
Identity = 54/124 (43.55%), Postives = 73/124 (58.87%), Query Frame = 1 
Query:   13 GWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELLRKR-ASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTR 381
            GW   P  S DEN +DLA L+ARNS C +G +GC +              + G V    I +     L  KR +SD HAE NA+A C  +G++ +G +AY+ +PPCK C+T+LATAGI+RIV R
Sbjct:   28 GWSPRPEASGDENGIDLAVLLARNSKCRQGSMGCAIA------------SAAGVVVAIGINSPFWGSLSAKRPSSDVHAEVNAMAACTRRGVSTQGGTAYITMPPCKRCFTVLATAGIKRIVMR 139
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A0L0HDW3_SPIPD (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HDW3_SPIPD)

HSP 1 Score: 95.5 bits (236), Expect = 1.290e-19
Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELL-------RKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTR 381
            + +Y W++DP +S D+N +DLA LVARNS   +G +G +L+      P + L+ +      N+++  TN  +         K +++ HAEANAV+ CA +GI   GA AY+  PPCK C+ LL  AGI+RIV R
Sbjct:   46 INTYDWRYDPDMSFDDNYIDLACLVARNSLSQKGHMGAVLIE-----PPSTLNTA-----SNILLLATNVPVYPPPPSKNMKASAEIHAEANAVSSCARQGIKTSGAWAYITFPPCKECFMLLVYAGIKRIVFR 169
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A507EQ37_9FUNG (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EQ37_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 1.730e-19
Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNELL-------RKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTR 381
            + +Y W+++P IS D+N +DLA LVARNS   +G +G +L+R            S      N+++  TN  +         K +++ HAEANAV+ C  +GI   GA AY+  PPCK C+ LL  AGI+RIV R
Sbjct:   45 INTYDWRYEPDISFDDNYIDLACLVARNSLSQKGHMGAVLIR----------PPSTVNAASNILMLATNVPVYPPPPLKNMKASAEIHAEANAVSSCTRQGIKASGAWAYITFPPCKECFMLLVYAGIKRIVFR 168
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BLAST of jgi.p|Trimin1|336946 vs. uniprot
Match: A0A812J8Q4_9DINO (ComEB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812J8Q4_9DINO)

HSP 1 Score: 94.7 bits (234), Expect = 2.090e-19
Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 1 
Query:    1 LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLTGLHQSLGQVCGNVIIATTNNEL----LRKRASDRHAEANAVALCAAKGIALEGASAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIEDLDIDLVKVVDTEQRIRRREKL 516
            ++S+GW     +S D N +DLA L+ARNS+C  G +GC                ++    G +I    N  +     ++ ASD HAE NAV  CA  G A EG+S YV +PPCK C+  L  AG+RRIVTR    E    + K    D+  +   LDI +  V DT +R  R +KL
Sbjct:   21 IQSFGWTPLEELSGDSNGIDLALLLARNSSCKAGSMGC----------------AIADKSGRIIAGHVNGPVWEPNAKRPASDLHAEVNAVGRCARLGRATEGSSVYVTMPPCKRCFMALIAAGVRRIVTR---KEFLTQDSK----DIQTAARRLDIAVKVVSDTAERRERLDKL 173
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336946 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8D7_9STRA2.280e-181100.00CMP/dCMP-type deaminase domain-containing protein ... [more]
C1MT26_MICPC1.330e-3141.95Cytidine deaminase n=1 Tax=Micromonas pusilla (str... [more]
R1DJG1_EMIHU1.440e-2936.03CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A7S3RZ63_EMIHU7.860e-2439.75Hypothetical protein n=3 Tax=Emiliania huxleyi Tax... [more]
A0A7S0CSB4_9EUKA6.540e-2140.94Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A813HT72_POLGL1.180e-2036.67Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7R9ZXB1_9DINO2.700e-2043.55Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A0L0HDW3_SPIPD1.290e-1940.30CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A507EQ37_9FUNG1.730e-1939.55CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A812J8Q4_9DINO2.090e-1937.50ComEB protein n=1 Tax=Symbiodinium natans TaxID=87... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_86contigContig_86:192378..195671 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|336946|MIX45709_36_58
DescriptionCytidine and deoxycytidylate deaminase zinc-binding region
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CKB9@1|root,2S8JJ@2759|Eukaryota
Evalue1.25e-32
Seed ortholog38833.XP_003058420.1
Hectar predicted targeting categoryother localisation
TranscriptId337268
TrackFilteredModels1
ProteinId336946
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336946gene_13677Tribonema minus UTEX_B_3156 geneContig_86 192378..195671 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336946Trimin1|336946|MIX45709_36_58Tribonema minus UTEX_B_3156 polypeptideContig_86 192442..195671 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13677_6exon_13677_6Tribonema minus UTEX_B_3156 exonContig_86 192378..192660 -
exon_13677_5exon_13677_5Tribonema minus UTEX_B_3156 exonContig_86 193375..193455 -
exon_13677_4exon_13677_4Tribonema minus UTEX_B_3156 exonContig_86 193989..194051 -
exon_13677_3exon_13677_3Tribonema minus UTEX_B_3156 exonContig_86 194281..194400 -
exon_13677_2exon_13677_2Tribonema minus UTEX_B_3156 exonContig_86 194827..195108 -
exon_13677_1exon_13677_1Tribonema minus UTEX_B_3156 exonContig_86 195624..195671 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13677UTR3_13677Tribonema minus UTEX_B_3156 three_prime_UTRContig_86 192378..192441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13677CDS_13677Tribonema minus UTEX_B_3156 CDSContig_86 195624..195671 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13677 ID=mRNA_13677|Name=jgi.p|Trimin1|336946|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=877bp|location=Sequence derived from alignment at Contig_86:192378..195671- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TTGAAGTCGTATGGATGGCAGTGGGATCCAGCCATCAGCGTGGATGAGAA
TCTGCTGGACCTGGCATTCCTGGTGGCGCGCAACAGCACATGCTTAGAGG
GCAAGGTTGGGTGCTTGCTGGTCAGGGGCTTGCCTCGAGGTCCCCTCACA
GGCCTGCATCAGTCGCTCGGCCAGGTTTGCGGCAATGTCATCATTGCGAC
CACCAACAACGAGCTGCTGCGGAAGCGCGCCAGTGACAGGCACGCGGAGG
CTAACGCGGTGGCGCTGTGCGCCGCCAAGGGGATAGCGCTAGAGGGCGCA
TCGGCTTATGTCATCATACCGCCCTGTAAGAACTGTTATACACTGCTGGC
GACAGCGGGCATACGGCGTATTGTCACAAGGGCCGTCACTTCTGAGCGCG
CGGATTATGAGGATAAGAGATTTCCACCAGACATGTTGCAGAGTATTGAG
GACCTTGACATTGACCTTGTCAAGGTTGTGGACACAGAGCAGCGCATAAG
ACGGCGAGAAAAGCTGGGTAGGGACAATGAAGACTGGGCCCGTGTACGGG
ATCTGCGAGCAGATAAACGCATGCGGCGACTTGCCAAAAATGAGGCTGTG
AGGAACACTGCTGTGGCTGAAAGCGCTGTAAGCATGCCGGCAACACCAGC
AGCATCAGGACTTGTCGCACCTGCGGAAAGAGGGCACCCAAGCAATGGTG
ACGCAATCGCAATGCCTGCAGCCCTACAGGACACACAGCAACCGCCTTTA
GAAGGGGAAGGAGGTGCTGCCAGCGCAGCCGAATCTACAGAGCAATCAGC
AGCCGCCGTATGACACACAATTAATGCCTCATCTTATGCTACGGTTGTAA
TGCAGCATGATCGTTAGCTGTAGCCAC
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protein sequence of jgi.p|Trimin1|336946

>Trimin1|336946|MIX45709_36_58 ID=Trimin1|336946|MIX45709_36_58|Name=jgi.p|Trimin1|336946|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=271bp
LKSYGWQWDPAISVDENLLDLAFLVARNSTCLEGKVGCLLVRGLPRGPLT
GLHQSLGQVCGNVIIATTNNELLRKRASDRHAEANAVALCAAKGIALEGA
SAYVIIPPCKNCYTLLATAGIRRIVTRAVTSERADYEDKRFPPDMLQSIE
DLDIDLVKVVDTEQRIRRREKLGRDNEDWARVRDLRADKRMRRLAKNEAV
RNTAVAESAVSMPATPAASGLVAPAERGHPSNGDAIAMPAALQDTQQPPL
EGEGGAASAAESTEQSAAAV*
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mRNA from alignment at Contig_86:192378..195671-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13677 ID=mRNA_13677|Name=jgi.p|Trimin1|336946|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3294bp|location=Sequence derived from alignment at Contig_86:192378..195671- (Tribonema minus UTEX_B_3156 )
TTGAAGTCGTATGGATGGCAGTGGGATCCAGCCATCAGCGTGGATGAGGT
ACGTAGTTTGCACCTGCATGCAGGAGTGCTACAACACTGTATTGTATGTG
CAATTGCTACATGAGGGAGTGCAGCCTTCGTTAAGTTTTTCTGTTGTGCA
TGCAGTTGAAGTAGGCGGCGATGTGTGCAAAATCTCAGATAGTTCGGCGC
GCTGCTGAAGCATATGGTGCATGAAGCTTCCTTGACGACTTTCATAGCAT
ATGCCGCCGGTGCCAAAGAATTTGACGTGTAATTGCCTCATTGAAAGATA
CCTTGTATGTATCACATACTGCGTAGGTGCCCTTGCCCCTTTGGCGCCTC
ACAGCCTGATTTTTGCTGGCTTGTACGCACCATGTCTTAACATGTACTCA
TACCCGTTATGATAAGTAGAATCAATGTTTGTCATCTTGTGAAACTCCGA
ATCAAGATGTTGCCAGTTCTGGATAGCCACCGTCCATCGTCGTCCCTGAT
CGCAGCATGTAGTTGCTGCCTGCATCCCTAATTGAGCCAAGACGGCATGT
GCACTCCTTACAGAATCTGCTGGACCTGGCATTCCTGGTGGCGCGCAACA
GCACATGCTTAGAGGGCAAGGTTGGGTGCTTGCTGGTCAGGGGCTTGCCT
CGAGGTCCCCTCACAGGCCTGCATCAGTCGCTCGGCCAGGTTTGCGGCAA
TGTCATCATTGCGACCACCAACAACGAGCTGCTGCGGAAGCGCGCCAGTG
ACAGGCACGCGGAGGCTAACGCGGTGGCGCTGTGCGCCGCCAAGGGGATA
GCGCTAGAGGGCGCATCGGCTTATGTCATCATACCGCCCTGTAAGGTACT
ACTTCAGCTTTGCGAGCTGTTTGAATGCGGTCAAGTAACCGAAGTTCTGT
CAGCTCTTAAAGTAATTTGCTGACAGCGTTCTGCCGCAACCATAGAGCTA
TCGTAGTGCGGTTGAAACACGTGTTTTGATATGCTGAGCAGATGTGATTG
TCGCAGTAAGGTGTGCAGATGTGGCTGCCATGATCACCATCTCTGCACAG
ATTACCTTGCACAGTGCGGTGCTACGCCCAGCCCTCTTGACCAGGAGTGA
CAGCGGTGTAGCTACTTAGTGGGGGTCGCTCTCTTGACCAGGAGTGACAG
CGGTGTAGCTAGCAGGGGTGGCTGCTTGAGTTGACAGCTTTCCTTCTCAA
CGGCTGCTTGTCTCTCTGCTATGTATCAATTTGTCACGACTAGTGCTTCT
GCTGCTTGGTGCCTGCTGCAGAACTGTTATACACTGCTGGCGACAGCGGG
CATACGGCGTATTGTCACAAGGGCCGTCACTTCTGAGCGCGCGGATTATG
AGGATAAGAGATTTCCACCAGACATGTTGCAGAGTATTGAGGTGAGGCAC
AGAATATCACAGCCTAGCGTCGAGCAATGTTCAGCACTTGAACTGCCTGC
ATGTGCTGTCAATCATGGACACCTCACACACACACAGACACGTGTTTGTT
GCTGCAAAGCCTGCTGACAGACACAACTTATCGTGTTCTTCCCTTACAAT
AGTGGGCACTCAAGTACTCTCACTGAGCCGCAAATGACCCCGAGTATGTC
TGGTTGCATGCTTCATGCAGGACCTTGACATTGACCTTGTCAAGGTTGTG
GACACAGAGCAGCGCATAAGACGGCGAGAAAAGGTCAGTCCAAGTGCTCA
TGACCTCATCGTGCCGGCCATCACAGCAGTTGCATGCGCATTGGTGGTGA
CTAAACAGAGCACACTCACTTCTACAGTAGCAGCATGCGACAGGGCGCTG
TTCTTCTGGTGCTTGAGGTCACCTTGACATTGAGCTCTGACGGTGTACAC
CGACAGGCAGGGGCGAAACAGCTTGCCAGTTTGCTACAAATTATGACTTG
ACACTAAGAACGTTGCGGTGTTGGGACAGCCGCAAATCCACCCCTGGAGC
ATGGATACTGCATTGCCGCAGGTGTCTACAAATGTGATGTGTGAGCGTGG
TCGCAAGCATTTTGTGGTGTGCAGGAAATTGACGACACTGGAATCATCAG
CAGATGAGAGCATATGCTTCAGCCGCCCACTGTTTGTGATGTTGTACTAC
GCAATGTGCTTTGGTTGCTTGTTCGTGTTCATGCAAAGCGGCCTGCTTTA
AAATCAATGCGGTTGTTCATTTTTGCTTTGATGACCGATTCGTGAATTCT
GCCTGCTATGCTGCAGCTGGGTAGGGACAATGAAGACTGGGCCCGTGTAC
GGGATCTGCGAGCAGATAAACGCATGCGGCGACTTGCCAAAAATGAGGTA
CGCACATCCATTGCTCAAACCTCCCCCTTACATCAAGTCTCCATATATGT
ACCAGCACAGTGTATCAGTACTTCACTGTATCTGTGGATGTTTTATTCTG
AGCATGTAGTGGGGTTTCATGGATATTACCAACACTGTACATGAGCCCAA
GCAGCAGGACAACATCATCGTAAATTGGAGTGACACCAGGTGTGCAGGTG
TGCACGGTCGTCCGCAGCAGGACAACATCATTGTAAACGTAGGTGTGAAT
TGGATTGACATCAGGTGAGCGCGGTTGTCCGCAGAGGACACTCTGTTATG
TGTGACCAAGAAGGTGTCCCTGATGCCTACTTGACGCCAGAAAGCTCGGC
CATGCAACTGAAGCTTTACAAACGGTGTTGCACAACTTGACCAGGCAACA
TTTGTAGGAAATGCATCCACATACTTCTATGCACTGCCATGGCACATGAT
GAGTGCATCCGCTCTGTCCTACTACGGGCCTGTTGGTTTCTTGCATATAC
GCAATGCTGCATGAGTGGTGAAGTATAGTACGACGCAAGGGGTTTGTGGG
AAATGCTGTGGATAGCCGCTCCTTCACATCTATGCAATGTCTTCCAACAT
GTAATGGATTGTCACGACTACATGCATATTCGCATTGCGCCGTTTCATAT
AGATTCTGCTTGATAACATTGAATGCGCTGTTTTGATTGGGTGCTGCGCA
CGCACACACAGGCTGTGAGGAACACTGCTGTGGCTGAAAGCGCTGTAAGC
ATGCCGGCAACACCAGCAGCATCAGGACTTGTCGCACCTGCGGAAAGAGG
GCACCCAAGCAATGGTGACGCAATCGCAATGCCTGCAGCCCTACAGGACA
CACAGCAACCGCCTTTAGAAGGGGAAGGAGGTGCTGCCAGCGCAGCCGAA
TCTACAGAGCAATCAGCAGCCGCCGTATGACACACAATTAATGCCTCATC
TTATGCTACGGTTGTAATGCAGCATGATCGTTAGCTGTAGCCAC
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Coding sequence (CDS) from alignment at Contig_86:192378..195671-

>mRNA_13677 ID=mRNA_13677|Name=jgi.p|Trimin1|336946|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=813bp|location=Sequence derived from alignment at Contig_86:192378..195671- (Tribonema minus UTEX_B_3156 )
TTGAAGTCGTATGGATGGCAGTGGGATCCAGCCATCAGCGTGGATGAGAA
TCTGCTGGACCTGGCATTCCTGGTGGCGCGCAACAGCACATGCTTAGAGG
GCAAGGTTGGGTGCTTGCTGGTCAGGGGCTTGCCTCGAGGTCCCCTCACA
GGCCTGCATCAGTCGCTCGGCCAGGTTTGCGGCAATGTCATCATTGCGAC
CACCAACAACGAGCTGCTGCGGAAGCGCGCCAGTGACAGGCACGCGGAGG
CTAACGCGGTGGCGCTGTGCGCCGCCAAGGGGATAGCGCTAGAGGGCGCA
TCGGCTTATGTCATCATACCGCCCTGTAAGAACTGTTATACACTGCTGGC
GACAGCGGGCATACGGCGTATTGTCACAAGGGCCGTCACTTCTGAGCGCG
CGGATTATGAGGATAAGAGATTTCCACCAGACATGTTGCAGAGTATTGAG
GACCTTGACATTGACCTTGTCAAGGTTGTGGACACAGAGCAGCGCATAAG
ACGGCGAGAAAAGCTGGGTAGGGACAATGAAGACTGGGCCCGTGTACGGG
ATCTGCGAGCAGATAAACGCATGCGGCGACTTGCCAAAAATGAGGCTGTG
AGGAACACTGCTGTGGCTGAAAGCGCTGTAAGCATGCCGGCAACACCAGC
AGCATCAGGACTTGTCGCACCTGCGGAAAGAGGGCACCCAAGCAATGGTG
ACGCAATCGCAATGCCTGCAGCCCTACAGGACACACAGCAACCGCCTTTA
GAAGGGGAAGGAGGTGCTGCCAGCGCAGCCGAATCTACAGAGCAATCAGC
AGCCGCCGTATGA
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