mRNA_12135 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|142941
Unique NamemRNA_12135
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A835YT55_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT55_9STRA)

HSP 1 Score: 600 bits (1547), Expect = 8.350e-217
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1
Query:    1 LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
            LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG
Sbjct:    1 LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 302          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: D7FP09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP09_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 3.750e-76
Identity = 131/299 (43.81%), Postives = 189/299 (63.21%), Query Frame = 1
Query:   25 EYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA----LSADFFTPLRRACLREIYERVYAPLRADEAR-FAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
            EY++LL  L   +GQ  LG F+ E+  QH L  W+D  ++R+IP+ DYR  +A+Q+F +Y  A+A   + F+ +    E+   L++       L  D F  +++ C R I+E  +  L+ + AR +  Y+ E  + +N + V+DF YME LG G FG+VV V K+ST RHYAMK+QHK  L+  +      L  E      C+HPF+++M+YA  T+ HAI+VL L+TTG LQDA+D+SP  +L     RFY AE+ +AL+HLH+ GLMYRDLKPRNVM+  DGH++L D+GGV D  G
Sbjct:   53 EYVELLAMLHSPVGQNFLGRFSMEIGTQHVLFAWSDIQEYRAIPTVDYRFTKAKQIFGKYLRASATA-LDFLPEGLGEEIYNCLDQAREDKNLLGPDLFLQVQKVCFRHIFEFTFQELKNNYARRYEAYQEEGASRFNRIGVNDFWYMEKLGEGAFGKVVHVVKKSTGRHYAMKIQHKTELLRSFARSLSRLDNEKMVFQACNHPFVLQMDYAFQTELHAIIVLNLVTTGNLQDAIDSSPKKRLDEPRARFYAAEIVIALIHLHDMGLMYRDLKPRNVMLGMDGHIQLADMGGVGDCIG 350          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A7S1U415_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U415_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.460e-69
Identity = 128/291 (43.99%), Postives = 178/291 (61.17%), Query Frame = 1
Query:   49 LDCSLGQRRLGAFA-AEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA----LSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
            LD  +GQR +G FA +    +H  C W D  +F++IP+ DYRR +A  ++ +Y    A   +G V+   +    G +ER       ++ + F  + +    +IY   + P +  + ++ +Y  E++  YN VSVDDF+YME LG GGFGRVV   K ST +HYAMK+Q K AL++ + +D   L AE +  A C HPFI+ ++YA  T  HAIL L L+T G LQ+ ++  P  +L  D V  Y AEV LAL HLHE GLMYRDLKP NV++  DGHV+L D+GGVADFKG
Sbjct:   68 LDDPIGQRYVGQFAKSNFTHEHFFC-WIDMQEFKAIPTKDYRRSKAMHIYDKYLKVGAVLELGSVAPQEKERFKGIVERARGDKSVVTPNMFDDIWQMVFVDIYHNTFIPFKRSD-KYEEYRKEIRETYNKVSVDDFEYMEKLGEGGFGRVVHCRKISTGKHYAMKIQLKTALLDTFWDDPTRLDAEKSVFAACHHPFIVSLDYAFQTPSHAILALGLVTAGDLQEIMEKEPSKRLDEDRVVLYTAEVVLALQHLHELGLMYRDLKPCNVLLGADGHVQLADMGGVADFKG 356          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A7S3UU75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU75_HETAK)

HSP 1 Score: 223 bits (567), Expect = 2.320e-68
Identity = 112/230 (48.70%), Postives = 152/230 (66.09%), Query Frame = 1
Query:  229 VGFVSDAARAEMAGRLERG----EALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
            +GFV++  +A  A  L R     + L  + +  L + C  EI+++++   + D+  ++ +  E  A YN V V+DF+YMELLG+G FGRVV V K+ST  HYAMK+Q KR LV ++R+D   L  E    A C+HPFI+ M YA  T+ + +LVL L+T G LQDA+D S  G+L  +  RFY AEVALAL HLH+ GLMYRDLKPRNV++ +DGHV L D+GGV DF G
Sbjct:    3 LGFVTEQDKANYAELLARAREQPQLLGTELYDDLLKRCFLEIFQQIFIRFKVDDESYSAFREESDATYNVVGVEDFEYMELLGAGAFGRVVHVRKKSTGNHYAMKIQIKRDLVANFRDDLTKLENEKTVFAACNHPFILDMHYAFQTELYCVLVLRLVTAGNLQDAIDESALGRLGEEQARFYTAEVALALFHLHDMGLMYRDLKPRNVLLNQDGHVLLADMGGVGDFAG 232          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: D8LEF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF7_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.610e-67
Identity = 122/298 (40.94%), Postives = 183/298 (61.41%), Query Frame = 1
Query:   31 MKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERG--------EALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
            +++   L+  +GQ+ +G FA +V  Q     W D  +FRSIP+ DYRR ++  ++++Y    A   VG +    RA++   ++ G          +S D F   R+A  +E++   +    A    +A+  A+++ AYN V  DDF Y+E +G GGFGRVV V K++TQ HYAMK+Q K AL++ + +D   +  E   L+   HPFI+ M+YA  T E  I+ LEL+T G LQ+A+D +P G++    V+FY AE+ LAL+HLH+ GLMYRDLKP NV++  DGHV+L D+GGVA+F
Sbjct:   19 LEMRAILEDPIGQKYIGQFAKKVMTQESFYAWVDIQEFRSIPTGDYRRGKSMHIYQKYIREGAVLQVGSIPAEERAKIKHIIDAGVVDKAGNKSGISTDMFDFFRKAVFKEMFYNTFQRFSASP-EYAQMHADIKNAYNKVCPDDFLYIERIGEGGFGRVVHVKKKTTQSHYAMKIQLKTALLDTFNDDPTRIDHERRVLSVTHHPFIVGMDYAFQTPELGIMCLELVTGGDLQEAIDTAPEGRIEAKRVQFYSAEIILALVHLHDLGLMYRDLKPCNVLLMGDGHVKLADMGGVAEF 315          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A7S3GQ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ14_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.370e-64
Identity = 121/290 (41.72%), Postives = 172/290 (59.31%), Query Frame = 1
Query:   49 LDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGE----ALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
            LD +L Q  +G +A ++ A      W D  D+++IP   YRR +A  ++ +Y    A   VG +    R +    L+  +     L+ DF+  L+  C   +Y  VY P +   A F      ++  YN+V + DF+Y   LG GGFG VV   K+ST +HYAMK+Q KR L++ +++D      E  A A+C HPFI+ ++YA  TD  AI+VL L T G LQ AL+ +   +L+ D V+FYVAE+ LAL +LH+ GLMYRDLKP NV++ EDGH++LVDLGGVAD  G
Sbjct:    3 LDDALSQNAIGKYAKDLKALDIFMCWIDIQDYKTIPVESYRRSKALHIYHKYIKIDAVLQVGELDMKEREKYKTDLDASKDDPSILTNDFYDKLQSRCFIAVYHNVYIPFKLT-AEFKSLHQTIKKKYNNVRMQDFEYYNKLGEGGFGFVVHCKKKSTGKHYAMKLQTKRGLLDCFQDDPWRADFEKQAFASCQHPFIVNLDYAFQTDALAIMVLGLATAGDLQKALNRAENDRLSEDRVQFYVAEMVLALSYLHQMGLMYRDLKPNNVLLNEDGHIQLVDLGGVADESG 291          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A835ZAC1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 9.290e-62
Identity = 117/296 (39.53%), Postives = 179/296 (60.47%), Query Frame = 1
Query:   25 EYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGE----ALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
            E+M+L   L+  +GQ+ +GAFA +         WT+  ++RSIP+ADY+R  A  ++++Y    A   +G V  A R  +   L++ +      +   +  +++A   E+Y   +   +  +  +++    L+  YN V + DFDY+  +G GGFGRVV V K+ST  H AMK+Q K AL+  + +D   +  E   LA   HPFI+ M YA  T+  AI+VL+L+T G LQ+A++ +P  +L    V+FYVAE+ LAL HLHE GLM+RDLKP NV++ +DGHV+L D+GGVA+F
Sbjct:   20 EHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSD-EYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEF 314          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: F0WFN3_9STRA (Protein kinase putative n=2 Tax=Albugo TaxID=65356 RepID=F0WFN3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.970e-60
Identity = 115/293 (39.25%), Postives = 171/293 (58.36%), Query Frame = 1
Query:   34 KLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA----LSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
            +LL  +   +GQ+ LGA+A ++        W +  DFR  PS  YR+  A+ + ++Y  + +P  +G +     A     ++  E     ++ D F  L +  L ++Y+  +   +A  A +  Y  E++  YN V+VDDF+Y+ELLGSGGFGRVV   K+ST +HYAMKVQ K  L++ Y++    + +E   L  C +PF++ M Y+  T  HAI+V EL+  G L  AL +S    L+ D VR Y AE+ LAL H+HE GL+YRDLKP NV++ EDGH+ L D+G  A F
Sbjct:   56 ELLAVVSDPVGQKHLGAYAKKILTSETFFCWVEINDFRDAPSLGYRKSLAKLIHKKYIKSGSPMALGSLPSDVVAHYENHIKAMETNESIVTPDLFDLLMKYVLSDMYQSTFVRFKAS-AEYDLYRKEVKETYNRVTVDDFEYLELLGSGGFGRVVHARKKSTGKHYAMKVQLKAGLLDEYQDQLAQITSEKDILQACHNPFVLDMHYSFQTPAHAIIVSELVRGGDLGSALASSRESHLSEDRVRLYAAEIGLALNHMHELGLIYRDLKPVNVLLGEDGHIVLADMGLAAGF 347          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A024U193_9STRA (AGC protein kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U193_9STRA)

HSP 1 Score: 211 bits (537), Expect = 7.470e-60
Identity = 111/281 (39.50%), Postives = 170/281 (60.50%), Query Frame = 1
Query:   49 LDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA--LSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLG 885
            L+  +GQ+ +G +A ++        W + L+FR  PS+ Y+R  A+ ++++Y    A   +G ++    A+   +L   +   ++ DFF P+++ C  ++    Y   ++    F  Y+ EL+  YN V+VDDFDY+ELLGSGGFGRVV   K+ST +HYAMK+Q K  L++ +++    + +E   L  C+HP+I+ M Y+  T  HAI+V EL+  G L + +  S  G L    VR Y AE+ALAL HLHE GL+YRDLKP NV++ EDGH+ L D+G
Sbjct:   67 LNDPVGQKHIGNYAKKILTSESFYCWIEILEFRDAPSSGYQRSVAKHIYKKYIREGASMALGGLTREMVADYDQKLAVIDTALINQDFFAPIQKLCFDDMCRNTYHRFKSSP-EFDLYKLELKDTYNKVTVDDFDYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKNGLLHEHQDQLDQITSEKDILQICNHPYILDMHYSFQTSAHAIIVTELVRGGDLNELMKTSKKGYLPEGRVRLYAAEIALALNHLHELGLIYRDLKPCNVLLGEDGHIVLADMG 346          
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: H3GJZ7_PHYRM (Uncharacterized protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GJZ7_PHYRM)

HSP 1 Score: 209 bits (533), Expect = 1.230e-59
Identity = 114/296 (38.51%), Postives = 173/296 (58.45%), Query Frame = 1
Query:   34 KLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVS-------DAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
            +LL  L   +GQ+ +GAFA ++        W +  +FR  PS  YR+  A+ ++R+Y    +   +G ++       D   AE+      G + + DFF PL    + ++ +  +   +A  + +  Y+ +L+  YN V+++DF+Y+ELLGSGGFGRVV   K+ST +HYAMK+Q K  L++ + +    + +E   L  C +PF++ M Y+  T  HA++V EL+  G L DAL +S  G L  D VR Y AE+ LAL H+HE GL+YRDLKP NV++ EDGHV L D+G  A F
Sbjct:   65 ELLHMLHDPVGQKHIGAFAKKILTSETFFCWVEIKEFREAPSIGYRKSMAKLIYRKYIKNGSTMALGSITSDLIVLYDKKIAEL--EANHGSSATVDFFDPLMTNIVADMCQNTFMRFKAS-SEYETYKKDLKDTYNKVTIEDFEYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTPAHAVIVTELVRGGDLGDALKSSRDGYLHEDRVRLYAAEIGLALNHMHELGLVYRDLKPGNVLLGEDGHVILADMGLAAGF 357          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YT55_9STRA8.350e-217100.00Kinase-like domain-containing protein (Fragment) n... [more]
D7FP09_ECTSI3.750e-7643.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U415_9STRA1.460e-6943.99Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3UU75_HETAK2.320e-6848.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LEF7_ECTSI1.610e-6740.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3GQ14_9STRA7.370e-6441.72Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A835ZAC1_9STRA9.290e-6239.53Kinase-like domain-containing protein n=1 Tax=Trib... [more]
F0WFN3_9STRA1.970e-6039.25Protein kinase putative n=2 Tax=Albugo TaxID=65356... [more]
A0A024U193_9STRA7.470e-6039.50AGC protein kinase n=2 Tax=Aphanomyces invadans Ta... [more]
H3GJZ7_PHYRM1.230e-5938.51Uncharacterized protein n=20 Tax=Peronosporaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_84contigContig_84:444383..451402 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|142941|gw1.84.54.1
BRITEko00000,ko00001,ko01000,ko01001,ko04147
KEGG Pathwayko01521,ko01522,ko04012,ko04062,ko04066,ko04140,ko04144,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04340,ko04350,ko04371,ko04666,ko04714,ko04724,ko04740,ko04745,ko04910,ko04931,ko05032,ko05165,ko05200,ko05205,ko05210,ko05212,ko05221,ko05224,ko05225,ko05226,ko05231,map01521,map01522,map04012,map04062,map04066,map04140,map04144,map04150,map04151,map04152,map04211,map04212,map04213,map04340,map04350,map04371,map04666,map04714,map04724,map04740,map04745,map04910,map04931,map05032,map05165,map05200,map05205,map05210,map05212,map05221,map05224,map05225,map05226,map05231
KEGG koko:K00910,ko:K04688
EC2.7.11.1,2.7.11.15
Descriptionprotein serine/threonine kinase activity
COG categoryH
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0598@1|root,KOG0598@2759|Eukaryota
Evalue6.15e-77
Seed ortholog2880.D7FP09
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-05_001850.1
TranscriptId143263
TrackFilteredModels1
ProteinId142941
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142941gene_12135Tribonema minus UTEX_B_3156 geneContig_84 444383..451402 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142941Trimin1|142941|gw1.84.54.1Tribonema minus UTEX_B_3156 polypeptideContig_84 444383..451402 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12135_5exon_12135_5Tribonema minus UTEX_B_3156 exonContig_84 444383..444457 -
exon_12135_4exon_12135_4Tribonema minus UTEX_B_3156 exonContig_84 445375..445566 -
exon_12135_3exon_12135_3Tribonema minus UTEX_B_3156 exonContig_84 447364..447614 -
exon_12135_2exon_12135_2Tribonema minus UTEX_B_3156 exonContig_84 448608..448899 -
exon_12135_1exon_12135_1Tribonema minus UTEX_B_3156 exonContig_84 451307..451402 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12135CDS_12135Tribonema minus UTEX_B_3156 CDSContig_84 451307..451402 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12135 ID=mRNA_12135|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=906bp|location=Sequence derived from alignment at Contig_84:444383..451402- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGCCTGCTGCTCCCCATGCGCAGGAGTACATGAAGCTGCTCGTGGCATT
GGACTGCAGCTTAGGACAAAGGAGGCTGGGAGCATTCGCTGCAGAGGTCA
ACGCGCAGCACCCGCTGTGCTTCTGGACGGACACGCTCGACTTCCGGTCG
ATACCGAGCGCCGACTACCGGCGCGTGCGCGCGCAGCAGGTCTTCCGCCG
CTACTGCGCCGCCGCTGCGCCGCAGCCGGTGGGCTTTGTGAGCGACGCCG
CGCGCGCGGAGATGGCGGGGCGCCTCGAGCGCGGCGAGGCGCTGAGCGCT
GACTTCTTCACGCCGCTGCGGCGCGCGTGCCTGCGCGAGATCTACGAGCG
CGTGTACGCGCCGCTGCGCGCGGACGAGGCGCGGTTCGCCAAGTACGAGG
CGGAGCTGCAGGCCGCGTACAACCACGTGAGCGTGGACGACTTTGACTAC
ATGGAGCTGCTGGGGTCGGGCGGCTTCGGGCGCGTGGTGCTCGTCTACAA
GCGCTCCACGCAGCGCCACTACGCCATGAAGGTGCAGCACAAGCGCGCGC
TCGTCAACCACTACCGCAACGACCACCGCTCCCTCGGCGCGGAGATGGCG
GCGCTCGCGACGTGCAGCCACCCGTTCATCATGAGAATGGAATACGCGCT
GCACACGGACGAGCACGCGATCCTCGTGCTGGAGCTGATCACGACGGGAA
CGCTCCAGGACGCGCTCGACGCGAGCCCGTACGGCAAGCTGGCGCACGAC
AGCGTGCGCTTCTACGTCGCGGAGGTCGCGCTCGCGCTGCTGCACCTCCA
CGAGTGCGGCCTCATGTACCGCGACCTTAAGCCGCGAAACGTCATGGTCG
CGGAGGACGGGCATGTGCGCCTCGTCGACCTCGGCGGCGTGGCGGACTTC
AAGGGC
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protein sequence of jgi.p|Trimin1|142941

>Trimin1|142941|gw1.84.54.1 ID=Trimin1|142941|gw1.84.54.1|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=302bp
LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRS
IPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEALSA
DFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDY
MELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMA
ALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHD
SVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF
KG
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mRNA from alignment at Contig_84:444383..451402-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12135 ID=mRNA_12135|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7020bp|location=Sequence derived from alignment at Contig_84:444383..451402- (Tribonema minus UTEX_B_3156 )
CTGCCTGCTGCTCCCCATGCGCAGGAGTACATGAAGCTGCTCGTGGCATT GGACTGCAGCTTAGGACAAAGGAGGCTGGGAGCATTCGCTGCAGAGGTGG GTTCTCATTTTCTGATCAGGCGTCGTTCCGACACCTTTGATGTGCTGTGT CATCAGAGGTACCTGCACGATGTAAAGGAGTTGCAAATCTGCGCAGCCTA CTGGTCCTTGCGCCCTTGCTCATGTCCGATTCCATTGTGGCGTGCCTTTG TGAAAAAAGGCCACACACTCAGCGACATTCATGCTGAAGCCACTGTGGAC CCTGCAGTGGCTCACAGCAGGTATATCGCAGCATGCCGCAGTAGCAGGTC GCATCGCCGAGCTAGGAAAGAAGGACAAGAACGACGACATGTGCACGTAC ACATTACGAGACTGAGAGTGCTCAGCGGCTCGCAATGCGCGATGCCTGAA TTGATGGGAACCGTCAGACAGCATGCGTCCTGCATGGTGAAGTGAACTGC GTACTTCCAAGTAATTCATTTGCAGTAGCGGGCGGGCGCGTGACACCTCC GGAGCACGGCAGCAGCGGCGCAGCAGTGACCAGCACCGCTTAGTTGCACG ACCTGCAAAACCAGGTGTCGTACACATTGTTCACGATACCATCGCTGCCG GGGTAGCCTCGGCGTGAACGGTGATCGCTCCAGCTGCGGTTCGACCGATG CGACGGAGGTCAATAGCGCATGATGCAAGACGCAACGCTCGCAGTGCCAG CGGCGCGCTCGGATGCGCCTGACATGCGCGTGATCTGTCTGGGCTGCTGG CACAGCTTCAGTAGCAGAGAGCGCTTTGCGTGCTTCATGGGGAATGACGA GGCCAGAAAAAGTGACCAGTTCACGACAGCGTACACTGGCTGCTCGCCGG ATGAGTGCGGTTGTGAGGTTGTATCTGGTCGGGCCTGCGACGCTGCTGCG CAGAGGAGTGGCCTACAGCTACAATCCATGCTTGAGGTGCATCAGCGCTC AGCGCCGGAGGTGCATCAGCGCTCAGCGCCAAAGGTGCATCAGCGCTCAG CACCGGACGTGCATCAGCGCTCAGCGCTGGAAGTACATCAATGCTCAGCG TTTGAGCCGCATCAGCACTCAGCACTGGGTGCATCAGCGCTTGGCACTGG ATGTGCATCAGCGCTCATGCGGTGATGTCCTGTTACAGCCGGTGGAGGTG CGCCTGGCTTTCCGGGTTGCTGCGGAGGCTCGCGACTTTGCACGCAGCGC TCAACAGCTTGAATTTCCACTAGGGCTAGGGTTCGGATGAGCGCCAGCGG TTGCCCTCTTCAGCGCTGCAAGGAGAAATCCAGCCCGTGCGCCGCTGACT TTCTGTTGGGCGTCAGATGCGTCAGCAGGGTGCAGGCTGGCATCTTTGAG TGCTGCCTCGTGTTGAAAACAAGCACAAAAACTTCAGAAACATGACGTTA ACTTCACCGAGACTGGTGCAGTACACACTTTGTTCGACAGGACCAGCTTG CGAACTTCAAATCTGGCACTGGCGGGGCATGGACGAACGCTTTGAGAGGT ACCTTGAAGGAACTGCTCAAAGAGCCCAAGTTGTGTTCGGACCGACGCAC AGCACCCACATTCGCTTCGACTGGCTACACCTCCAGCTTCAGCGCTAGCT GTGCAAACACCTACCTCAAACCCTAGCAGATGTAGCACTTAGGGTTAGGC GCTAGCCTCAGCACGCTCAACAAGGCTTCTGCTTCAGCCGTTACTGTGGA TGGTCAAGTTGAACCGATCAACGCGCAGCGGCAGCCCTGCTGCTGCGGTC AAAGCGTGGTGGCGGCTCTGACAGCGTGCCGTGTTGCCCCATCTCCCAGG GTCACGCAGTGCGCGCATGCGCTGCGTCGCTGCTCGCATCAGTCACTGCT CGCTACTCTCCGCACACAGAAACTTCACAGAAAAGGGTGTATGTACCAGC TGCTCAGCAGCACTTCTTGCCCTGTCTGCAGCGCTCAGCGACATGACTGC ACTGCGTCAGGGGCAGCGGCGGCAGCAGCTGCTGCGCAGCGACAGCAGCG GCAGCAGCGGCGGCGGCTGCCCCCCAAGCAGTCAAGCTGACCCATATGCT GCACGCAGGCACAGCCGCAGTTGCCCGCCACACTACCCTGGTGGCATGCG CTCCCGGTCACACGTTCGGTCCCCAGCCAACGGGGACGGCCGGCTTCCCC TGATCCTAAGCCTCGCCCCCTATCCCCAACCCTAACTCCTGGCTAACCCT CACCCGTGCGCGCACCTGGCGCGTATCGTTCACAAGAGAAATTGGCCTCG ACTGCCCCGGACGCATATCGACTGCAGCTTCAGCTTTAACCCTGTGCGTA CTCCTGAGAGGGATTTTCCTTAATGTGAGGCCACCCCCGGACTCCCTGCC CAAGTCAACGCGCAGCAACCGCTGCAGTTCTGCCCTGCACCACCATCTTA AGCCTCCCCCCCCCCCCCAACCCCCCCCCTACCCCCCCACCCCCCCTCAA CAGGTCAACGCGCAGCACCCGCTGTGCTTCTGGACGGACACGCTCGACTT CCGGTCGATACCGAGCGCCGACTACCGGCGCGTGCGCGCGCAGCAGGTCT TCCGCCGCTACTGCGCCGCCGCTGCGCCGCAGCCGGTGGGCTTTGTGAGC GACGCCGCGCGCGCGGAGATGGCGGGGCGCCTCGAGCGCGGCGAGGCGCT GAGCGCTGACTTCTTCACGCCGCTGCGGCGCGCGTGCCTGCGCGAGATCT ACGAGCGCGTGTACGCGCCGCTGCGCGCGGACGAGGCGCGGTTCGGTGAG TAGTGAGCTGTCTTTAGAAGTTGAAGAGTGTGTGTCGCGGCGAGACAAAT TTCAACTTGAAGTTTGATGAGGTGAGGCGCTGAGCGCTGACTTCTTCACG CCGCTGCGGCGCGCGTGCCTGCGCGAGATCTACGAGCGCGAGTACGCGCC GCTGTGCGCGGACGAGGCGCGCTTTGGTGAGCGCGCTGCATCTGCGCATG TTTATAAATGAATTGTGTGTCATGATAGAACAAAGCTCAACTTGAAGTCG TGAGGCGCTGAGCGCTGACTTCTTCACGACGCTGCGGCTCGCGTGCCTGC GCGAGATCTACGAGCGCGTGTACGCGCCGCTGCGCGCGGACGAGGCGCGC TTCGGTCAGCTGCGCGTACGTATTAATTGTGTGGCGAGACGAGACAAAGC TCAACTTGAAATTTGATGGTGCGAGGCGCTGAGCGCTGACTTTCTCCAGT CGTTGCGGCGCGGCGGAGCGCTGACTGCTTTCAGTCGCTCGGGGGCACCC CTACCTGTGCAAAGCATTCAGGACTCCCGCCGCATGAAGTCGGCGCACGC GCAGCAGAGCGCGTGCCGCCCCCGCACGCCGCCGCAACTTGCCGTGCTGC CGCCGCAGCCGAGTTTGAGGCAGAGCTGCCAGCCATGTGCATGTATGTTT GTACGTACTACGGAGTAGCCATGCACGCGGCAGAGTCCTGAATGCCTGCA CGCGGGGCGTGTCGCTGGGCTCTGACGCTGCGCGTCGTGCTGGCGGACCC CGCGCCTTTGCTGCTGCCGCCGCCGCCGCCGCCGCCGCCTCCGCCGCCGC ACACCTAACCCCTACCCTAGTGTACTGCACGCCTAACCCTAGCCCTAACC CTGACCTGACTCCACATTCATCGCACTTCGCAGCCAAGCACGAGGCGGAG CTGCAGGCCGCGCATGACCACCGCACGTGTAAATCTAGCCCTAACACTAA CCTTAACTTCAAACAACGTATGCCATCGCATTGCGCAGCCAAGTACGAGG CGGAGCTGCAGGCCGCGTACAACCACGTGAGCGTGGACGACTTTGACTAC ATGGAGCTGCTGGGGTCGGGCGGCTTCGGGCGCGTGGTGCTCGTCTACAA GCGCTCCACGCAGCGCCACTACGCCATGAAGGTGCAGCACAAGCGCGCGC TCGTCAACCACTACCGCAACGACCACCGCTCCCTCGGCGCGGAGATGGCG GCGCTCGCGACGTGCAGCCACCCGTTCATCATGAGAATGGTAAGATGTGC TTCGGTGCCGCTGAGTGAGGAATTTGATCAGGGTTAGGGTTAGGGTCGGG GTTAGGTACGGTTAGTGTTAGGGTTAGGGTCGGGGTTGGGGTGAGCGTCA GTGCTTTGCGAGGTATCGTAAGTGATCAGCGTGCAGCCACCCGTTCATCA TGAGAATGGTGAGCTGCGCTTCAGCGGCATGCATGGCACAAGTGTGCTGC AGCTGGCTTAGGGTTAAAATTGGGAGCACGTTTGGGGTAGGGTCAGGTTT AGGGTGAAGGTTAGGATTAGGGTCAGGGCTAGAGTAAGGGTTAAGGAAAT GGTTAGGGTGTTGAGGCCTCGCGAGGTACTATCATACTTCAGAGTATGTA GTTGACGTGCAGCCACCCGTTCATCATGAGGATGGCGAGTGAGCTGCAGC TGGGTCAGGGTTAGGGGGTTAGGGTTAGGTAAGGATTAGGATTAGCACGA AAGTTTGGGTTAGCGTAAGAGTTAGGGTTGGGGTAAGGGTCAGAGTTGGG GTGAGGGTGCTTCGTGAGGTGCTATATGTAGCTGCCGTGCAGCCACCCTT TCATCATGAGAATGATGAGTGAACCGCGCCATGCACGGCGATGACGGCAT CGACTGCATGCGCAATTCACAGGAAGGTGCCATATGCAGCTGCGTGCAGC CACCTGTTCATCATCATGATGGTGAGCTGCGATTCGGCAGCGTTAACGGC ACTGGCATGCTGCAGCTGGAATGCTTTGCGAGGTACTGTTTGTGATCATC GTGCCGTCGCCTATTCATCACGATAATGGGGAGCTGCTCTGCTGGCGCCG TGCGCGGGAACGCGTAGGCGGTACGCTGCTGCCGCAATGTCATGCGCTTC AACACCCGTACGTCCGACGTGCAAGTGTACGCGTTGCACACGGATGCGTG CGCACTACCTGCGTCCGAGGCCATGGTCGCAACAGCACGCTGTGCGCTGC GCTCTCAGCACCACGTTCGTCTTTTCGAGAGACCTACACATGTTGCGGCA GCTGAGAACTCAGCAGTGACATTCCCGCGCTCTTCTGGGACTCACTCTGT TACTCTACTTGTGACGCGGTACTCGCGCTGGACCTCGTCATCACACTAGC ACGCTGCAGGGCGCTCTTTCGCCGCTCGCTGTATGCCCTTGAGAAATTCA TTTCGGCAGCGCACTCGCCCTCTGACATCCCTTGCTTAATTAGTCACTCA CTCCACGGTACTGCTGCCTCACAAGTGCGTGCTGCACACGGACGAGCACG CGATCCTCGTGCTGGAGCTCGTCACGACGGGGACGTTGCAGGACGCGCTC TCGACACAATTATAAGAATTCATGGCGCCAGTGCACTTTTTCCTCGCTGC CATCAACTTCACTGATGAATTTACCGTACTGCACTTATGCACAACGCGAA TGCGCCTCAGGAGTATGCGCTGCACACGGACGAGCACGCGATCCTCGTGC TGGAGCTCATCACGACGGGGACGCTGCAGGACGCGCTGTTTACACAAGTT GCTTGATTTATTCAAAGAAACTCGCGGCGACGGTGCATATTCTCATTGCC ATCGGCTTTACTGTCGCGCTTACTGCTCACAACGCGAATGCGCCTCAGGA ATACGCGCTGCACACGGACGAGCACGCGATCCTCGTGCTGGAGCTCATCA CAACGAGGACGCTGCAGGACGCGCTCGACACAACTTTTGCTATGTCATAC TTCAAGTATAAGTTCATGGTGGCAGGGCAGTTTGTTGCTCAGGCTTACTG AACTGCGCTCTCCACAACACGATTGCACCTTCCCAGGAATACGCGCTGCA CACGGACGAGCACGCGATCCTCGTGCTGGAGCTGATCACGACGGGAACGC TCCAGGACGCGCTCGACGCGAGCCCGTACGGCAAGCTGGCGCACGACAGC GTGCGCTTCTACGTCGCGGAGGTCGCGCTCGCGCTGCTGCACCTCCACGA GTGCGGCCTCATGTACCGCGACCTTAAGGTGAGGGACCTAGACTATACCC CTACATACACCCCCCCACACACACAACCGAGGTCCTGCAGCAGCGCTCTG CAGAGAGAGTGCAATCTCATGTACAGTACCGCGACCTCAAGGTGCGATAC CCAGACTGCAATGTACCCATGCATACATACATGCATACATACCCTCTAGG TAATGCAGCAGCACTCCGCAGCGCGAGTGCAGTTCCATGTACCGCGACCT CAAGGTGCGGTACCCAGACTGCATGTACCCATGCATACCTACCTACCTAC ATACATACCCCATCTAGGTAGTGCAGCAGCGCTCCGCAGCGCGAGCGCCG CCTCATGTACCGCAATCTCAAGGTGCGGTGCCCAAACTGGACCATACCTC TACACACACCCCAATGGTAGCACAGCAGCAGCGCTCCGCAGCGCGAGTGT GGCCTCACTCATCGTGATCCCAAGGTGCGGGTTGCGTAGGTGGTCGCCAC CGCGCTCGGGGTCTCGAAGTGGACGCTGTCGCATACCGTATGTTCCCCGA CAGTATGAACGTGCCTCTGTCTGATCCGTCTGCCGCCGCCCCCCTTGCCC GGCACTGCAAATGCTGATCTCACCACTTTGCCTGCGGCGCCGCCCGCAAC GTCATGGTCGCGGAGGACGTATTGCAACTCACCTGCTTTGGGTTCTTGTG GAGTGAAGCTGATGCCACCACGTACTGCCACAAACATGTACAGTACAGTG CTGCCACCTGGAGTGGCCGCTGTGACCTACTTCAAGTTGAAGTACCCCAC GTTCCACGGCACCGCGACTGACTGAACTGCGTTGCTGCCGTCTGTGCGCA GCCCCGCTGTGACATACCCCTTGTTTCCCGGCACCACAAATGCTTATAAA TAACACCGCTTCGCCTGTGCCGCCGCCGCCGCCGCCCGTGCGCAGCCGCG AAACGTCATGGTCGCGGAGGACGGGCATGTGCGCCTCGTCGACCTCGGCG GCGTGGCGGACTTCAAGGGC
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Coding sequence (CDS) from alignment at Contig_84:444383..451402-

>mRNA_12135 ID=mRNA_12135|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=906bp|location=Sequence derived from alignment at Contig_84:444383..451402- (Tribonema minus UTEX_B_3156 )
CTGCCTGCTGCTCCCCATGCGCAGGAGTACATGAAGCTGCTCGTGGCATT
GGACTGCAGCTTAGGACAAAGGAGGCTGGGAGCATTCGCTGCAGAGGTCA
ACGCGCAGCACCCGCTGTGCTTCTGGACGGACACGCTCGACTTCCGGTCG
ATACCGAGCGCCGACTACCGGCGCGTGCGCGCGCAGCAGGTCTTCCGCCG
CTACTGCGCCGCCGCTGCGCCGCAGCCGGTGGGCTTTGTGAGCGACGCCG
CGCGCGCGGAGATGGCGGGGCGCCTCGAGCGCGGCGAGGCGCTGAGCGCT
GACTTCTTCACGCCGCTGCGGCGCGCGTGCCTGCGCGAGATCTACGAGCG
CGTGTACGCGCCGCTGCGCGCGGACGAGGCGCGGTTCGCCAAGTACGAGG
CGGAGCTGCAGGCCGCGTACAACCACGTGAGCGTGGACGACTTTGACTAC
ATGGAGCTGCTGGGGTCGGGCGGCTTCGGGCGCGTGGTGCTCGTCTACAA
GCGCTCCACGCAGCGCCACTACGCCATGAAGGTGCAGCACAAGCGCGCGC
TCGTCAACCACTACCGCAACGACCACCGCTCCCTCGGCGCGGAGATGGCG
GCGCTCGCGACGTGCAGCCACCCGTTCATCATGAGAATGGAATACGCGCT
GCACACGGACGAGCACGCGATCCTCGTGCTGGAGCTGATCACGACGGGAA
CGCTCCAGGACGCGCTCGACGCGAGCCCGTACGGCAAGCTGGCGCACGAC
AGCGTGCGCTTCTACGTCGCGGAGGTCGCGCTCGCGCTGCTGCACCTCCA
CGAGTGCGGCCTCATGTACCGCGACCTTAAGCCGCGAAACGTCATGGTCG
CGGAGGACGGGCATGTGCGCCTCGTCGACCTCGGCGGCGTGGCGGACTTC
AAGGGC
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