mRNA_12135 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A835YT55_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT55_9STRA) HSP 1 Score: 600 bits (1547), Expect = 8.350e-217 Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1
Query: 1 LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG
Sbjct: 1 LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 302
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: D7FP09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP09_ECTSI) HSP 1 Score: 254 bits (648), Expect = 3.750e-76 Identity = 131/299 (43.81%), Postives = 189/299 (63.21%), Query Frame = 1
Query: 25 EYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA----LSADFFTPLRRACLREIYERVYAPLRADEAR-FAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
EY++LL L +GQ LG F+ E+ QH L W+D ++R+IP+ DYR +A+Q+F +Y A+A + F+ + E+ L++ L D F +++ C R I+E + L+ + AR + Y+ E + +N + V+DF YME LG G FG+VV V K+ST RHYAMK+QHK L+ + L E C+HPF+++M+YA T+ HAI+VL L+TTG LQDA+D+SP +L RFY AE+ +AL+HLH+ GLMYRDLKPRNVM+ DGH++L D+GGV D G
Sbjct: 53 EYVELLAMLHSPVGQNFLGRFSMEIGTQHVLFAWSDIQEYRAIPTVDYRFTKAKQIFGKYLRASATA-LDFLPEGLGEEIYNCLDQAREDKNLLGPDLFLQVQKVCFRHIFEFTFQELKNNYARRYEAYQEEGASRFNRIGVNDFWYMEKLGEGAFGKVVHVVKKSTGRHYAMKIQHKTELLRSFARSLSRLDNEKMVFQACNHPFVLQMDYAFQTELHAIIVLNLVTTGNLQDAIDSSPKKRLDEPRARFYAAEIVIALIHLHDMGLMYRDLKPRNVMLGMDGHIQLADMGGVGDCIG 350
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A7S1U415_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U415_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.460e-69 Identity = 128/291 (43.99%), Postives = 178/291 (61.17%), Query Frame = 1
Query: 49 LDCSLGQRRLGAFA-AEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA----LSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
LD +GQR +G FA + +H C W D +F++IP+ DYRR +A ++ +Y A +G V+ + G +ER ++ + F + + +IY + P + + ++ +Y E++ YN VSVDDF+YME LG GGFGRVV K ST +HYAMK+Q K AL++ + +D L AE + A C HPFI+ ++YA T HAIL L L+T G LQ+ ++ P +L D V Y AEV LAL HLHE GLMYRDLKP NV++ DGHV+L D+GGVADFKG
Sbjct: 68 LDDPIGQRYVGQFAKSNFTHEHFFC-WIDMQEFKAIPTKDYRRSKAMHIYDKYLKVGAVLELGSVAPQEKERFKGIVERARGDKSVVTPNMFDDIWQMVFVDIYHNTFIPFKRSD-KYEEYRKEIRETYNKVSVDDFEYMEKLGEGGFGRVVHCRKISTGKHYAMKIQLKTALLDTFWDDPTRLDAEKSVFAACHHPFIVSLDYAFQTPSHAILALGLVTAGDLQEIMEKEPSKRLDEDRVVLYTAEVVLALQHLHELGLMYRDLKPCNVLLGADGHVQLADMGGVADFKG 356
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A7S3UU75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU75_HETAK) HSP 1 Score: 223 bits (567), Expect = 2.320e-68 Identity = 112/230 (48.70%), Postives = 152/230 (66.09%), Query Frame = 1
Query: 229 VGFVSDAARAEMAGRLERG----EALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
+GFV++ +A A L R + L + + L + C EI+++++ + D+ ++ + E A YN V V+DF+YMELLG+G FGRVV V K+ST HYAMK+Q KR LV ++R+D L E A C+HPFI+ M YA T+ + +LVL L+T G LQDA+D S G+L + RFY AEVALAL HLH+ GLMYRDLKPRNV++ +DGHV L D+GGV DF G
Sbjct: 3 LGFVTEQDKANYAELLARAREQPQLLGTELYDDLLKRCFLEIFQQIFIRFKVDDESYSAFREESDATYNVVGVEDFEYMELLGAGAFGRVVHVRKKSTGNHYAMKIQIKRDLVANFRDDLTKLENEKTVFAACNHPFILDMHYAFQTELYCVLVLRLVTAGNLQDAIDESALGRLGEEQARFYTAEVALALFHLHDMGLMYRDLKPRNVLLNQDGHVLLADMGGVGDFAG 232
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: D8LEF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF7_ECTSI) HSP 1 Score: 229 bits (584), Expect = 1.610e-67 Identity = 122/298 (40.94%), Postives = 183/298 (61.41%), Query Frame = 1
Query: 31 MKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERG--------EALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
+++ L+ +GQ+ +G FA +V Q W D +FRSIP+ DYRR ++ ++++Y A VG + RA++ ++ G +S D F R+A +E++ + A +A+ A+++ AYN V DDF Y+E +G GGFGRVV V K++TQ HYAMK+Q K AL++ + +D + E L+ HPFI+ M+YA T E I+ LEL+T G LQ+A+D +P G++ V+FY AE+ LAL+HLH+ GLMYRDLKP NV++ DGHV+L D+GGVA+F
Sbjct: 19 LEMRAILEDPIGQKYIGQFAKKVMTQESFYAWVDIQEFRSIPTGDYRRGKSMHIYQKYIREGAVLQVGSIPAEERAKIKHIIDAGVVDKAGNKSGISTDMFDFFRKAVFKEMFYNTFQRFSASP-EYAQMHADIKNAYNKVCPDDFLYIERIGEGGFGRVVHVKKKTTQSHYAMKIQLKTALLDTFNDDPTRIDHERRVLSVTHHPFIVGMDYAFQTPELGIMCLELVTGGDLQEAIDTAPEGRIEAKRVQFYSAEIILALVHLHDLGLMYRDLKPCNVLLMGDGHVKLADMGGVAEF 315
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A7S3GQ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ14_9STRA) HSP 1 Score: 218 bits (554), Expect = 7.370e-64 Identity = 121/290 (41.72%), Postives = 172/290 (59.31%), Query Frame = 1
Query: 49 LDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGE----ALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADFKG 906
LD +L Q +G +A ++ A W D D+++IP YRR +A ++ +Y A VG + R + L+ + L+ DF+ L+ C +Y VY P + A F ++ YN+V + DF+Y LG GGFG VV K+ST +HYAMK+Q KR L++ +++D E A A+C HPFI+ ++YA TD AI+VL L T G LQ AL+ + +L+ D V+FYVAE+ LAL +LH+ GLMYRDLKP NV++ EDGH++LVDLGGVAD G
Sbjct: 3 LDDALSQNAIGKYAKDLKALDIFMCWIDIQDYKTIPVESYRRSKALHIYHKYIKIDAVLQVGELDMKEREKYKTDLDASKDDPSILTNDFYDKLQSRCFIAVYHNVYIPFKLT-AEFKSLHQTIKKKYNNVRMQDFEYYNKLGEGGFGFVVHCKKKSTGKHYAMKLQTKRGLLDCFQDDPWRADFEKQAFASCQHPFIVNLDYAFQTDALAIMVLGLATAGDLQKALNRAENDRLSEDRVQFYVAEMVLALSYLHQMGLMYRDLKPNNVLLNEDGHIQLVDLGGVADESG 291
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A835ZAC1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC1_9STRA) HSP 1 Score: 215 bits (547), Expect = 9.290e-62 Identity = 117/296 (39.53%), Postives = 179/296 (60.47%), Query Frame = 1
Query: 25 EYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGE----ALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
E+M+L L+ +GQ+ +GAFA + WT+ ++RSIP+ADY+R A ++++Y A +G V A R + L++ + + + +++A E+Y + + + +++ L+ YN V + DFDY+ +G GGFGRVV V K+ST H AMK+Q K AL+ + +D + E LA HPFI+ M YA T+ AI+VL+L+T G LQ+A++ +P +L V+FYVAE+ LAL HLHE GLM+RDLKP NV++ +DGHV+L D+GGVA+F
Sbjct: 20 EHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSD-EYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEF 314
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: F0WFN3_9STRA (Protein kinase putative n=2 Tax=Albugo TaxID=65356 RepID=F0WFN3_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.970e-60 Identity = 115/293 (39.25%), Postives = 171/293 (58.36%), Query Frame = 1
Query: 34 KLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA----LSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
+LL + +GQ+ LGA+A ++ W + DFR PS YR+ A+ + ++Y + +P +G + A ++ E ++ D F L + L ++Y+ + +A A + Y E++ YN V+VDDF+Y+ELLGSGGFGRVV K+ST +HYAMKVQ K L++ Y++ + +E L C +PF++ M Y+ T HAI+V EL+ G L AL +S L+ D VR Y AE+ LAL H+HE GL+YRDLKP NV++ EDGH+ L D+G A F
Sbjct: 56 ELLAVVSDPVGQKHLGAYAKKILTSETFFCWVEINDFRDAPSLGYRKSLAKLIHKKYIKSGSPMALGSLPSDVVAHYENHIKAMETNESIVTPDLFDLLMKYVLSDMYQSTFVRFKAS-AEYDLYRKEVKETYNRVTVDDFEYLELLGSGGFGRVVHARKKSTGKHYAMKVQLKAGLLDEYQDQLAQITSEKDILQACHNPFVLDMHYSFQTPAHAIIVSELVRGGDLGSALASSRESHLSEDRVRLYAAEIGLALNHMHELGLIYRDLKPVNVLLGEDGHIVLADMGLAAGF 347
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: A0A024U193_9STRA (AGC protein kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U193_9STRA) HSP 1 Score: 211 bits (537), Expect = 7.470e-60 Identity = 111/281 (39.50%), Postives = 170/281 (60.50%), Query Frame = 1
Query: 49 LDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVSDAARAEMAGRLERGEA--LSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLG 885
L+ +GQ+ +G +A ++ W + L+FR PS+ Y+R A+ ++++Y A +G ++ A+ +L + ++ DFF P+++ C ++ Y ++ F Y+ EL+ YN V+VDDFDY+ELLGSGGFGRVV K+ST +HYAMK+Q K L++ +++ + +E L C+HP+I+ M Y+ T HAI+V EL+ G L + + S G L VR Y AE+ALAL HLHE GL+YRDLKP NV++ EDGH+ L D+G
Sbjct: 67 LNDPVGQKHIGNYAKKILTSESFYCWIEILEFRDAPSSGYQRSVAKHIYKKYIREGASMALGGLTREMVADYDQKLAVIDTALINQDFFAPIQKLCFDDMCRNTYHRFKSSP-EFDLYKLELKDTYNKVTVDDFDYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKNGLLHEHQDQLDQITSEKDILQICNHPYILDMHYSFQTSAHAIIVTELVRGGDLNELMKTSKKGYLPEGRVRLYAAEIALALNHLHELGLIYRDLKPCNVLLGEDGHIVLADMG 346
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Match: H3GJZ7_PHYRM (Uncharacterized protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GJZ7_PHYRM) HSP 1 Score: 209 bits (533), Expect = 1.230e-59 Identity = 114/296 (38.51%), Postives = 173/296 (58.45%), Query Frame = 1
Query: 34 KLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSIPSADYRRVRAQQVFRRYCAAAAPQPVGFVS-------DAARAEMAGRLERGEALSADFFTPLRRACLREIYERVYAPLRADEARFAKYEAELQAAYNHVSVDDFDYMELLGSGGFGRVVLVYKRSTQRHYAMKVQHKRALVNHYRNDHRSLGAEMAALATCSHPFIMRMEYALHTDEHAILVLELITTGTLQDALDASPYGKLAHDSVRFYVAEVALALLHLHECGLMYRDLKPRNVMVAEDGHVRLVDLGGVADF 900
+LL L +GQ+ +GAFA ++ W + +FR PS YR+ A+ ++R+Y + +G ++ D AE+ G + + DFF PL + ++ + + +A + + Y+ +L+ YN V+++DF+Y+ELLGSGGFGRVV K+ST +HYAMK+Q K L++ + + + +E L C +PF++ M Y+ T HA++V EL+ G L DAL +S G L D VR Y AE+ LAL H+HE GL+YRDLKP NV++ EDGHV L D+G A F
Sbjct: 65 ELLHMLHDPVGQKHIGAFAKKILTSETFFCWVEIKEFREAPSIGYRKSMAKLIYRKYIKNGSTMALGSITSDLIVLYDKKIAEL--EANHGSSATVDFFDPLMTNIVADMCQNTFMRFKAS-SEYETYKKDLKDTYNKVTIEDFEYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTPAHAVIVTELVRGGDLGDALKSSRDGYLHEDRVRLYAAEIGLALNHMHELGLVYRDLKPGNVLLGEDGHVILADMGLAAGF 357 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142941 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12135 ID=mRNA_12135|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=906bp|location=Sequence derived from alignment at Contig_84:444383..451402- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTGCCTGCTGCTCCCCATGCGCAGGAGTACATGAAGCTGCTCGTGGCATTback to top protein sequence of jgi.p|Trimin1|142941 >Trimin1|142941|gw1.84.54.1 ID=Trimin1|142941|gw1.84.54.1|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=302bp LPAAPHAQEYMKLLVALDCSLGQRRLGAFAAEVNAQHPLCFWTDTLDFRSback to top mRNA from alignment at Contig_84:444383..451402- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12135 ID=mRNA_12135|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7020bp|location=Sequence derived from alignment at Contig_84:444383..451402- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_84:444383..451402- >mRNA_12135 ID=mRNA_12135|Name=jgi.p|Trimin1|142941|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=906bp|location=Sequence derived from alignment at Contig_84:444383..451402- (Tribonema minus UTEX_B_3156 )back to top |