mRNA_9763 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351133
Unique NamemRNA_9763
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A836C9G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G9_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 1.750e-181
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 2
Query:   92 MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS 1069
            MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS
Sbjct:    1 MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS 326          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.120e-17
Identity = 83/274 (30.29%), Postives = 120/274 (43.80%), Query Frame = 2
Query:   95 GFMRWLRGFYNALFWYGAAFDD-DDSLPAMDFKDLMEQYETE-GDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDR--------------DRAPKRTST-------------QPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADA-AELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVL 826
            G   W R FYN LFWYG A  + +D LPAM+F+DL+E+++   G++  AR R      P+               VPP +   + D  FRW P G                 RA  R ST             + +R                                       LRR+ R L  +      DL KV +RL V+D T+ELW+RR   + +R    GG++   +++ AKRR+Y L+++GR L++A VEL GRLE+  A L R++
Sbjct:  216 GLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQSSARPR------PI---------------VPPEDLAAEQD--FRWRPSGREATGGATATAESTNWSRAKGRGSTASGGATGSSRRRARRERDERDLDWESVGRAEREMHAAGGRGRREGGDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSR----GGSETDTDVLQAKRRIYGLKEEGRQLDSATVELEGRLEDCRAKLDRIV 462          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A6V1WCN8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WCN8_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 2.480e-6
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2
Query:  536 LRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARV 823
            LR +A  L   R  L  ++A+VD+RL VLD +LE+W RR  A+  R   PG   A E+  A+ RV +L+  G  LE    +L  ++ NA+ANL R+
Sbjct:   14 LRAKAGRLARARETLAAEIAQVDDRLRVLDVSLEMWYRRLNAMRRRGLGPG---APEVREARARVEELKALGAVLEREAGDLERQVANAAANLRRI 106          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A835YU23_9STRA (Meiotic nuclear division protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU23_9STRA)

HSP 1 Score: 394 bits (1011), Expect = 1.510e-134
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV
Sbjct:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: F5BX17_UNDPI (Meiotic nuclear division protein 1 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=F5BX17_UNDPI)

HSP 1 Score: 167 bits (423), Expect = 1.710e-46
Identity = 98/244 (40.16%), Postives = 139/244 (56.97%), Query Frame = 1
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            MV+K LS++EK+ ++L+I+H TK + +LKE+EK A + G+V+ T+KDVN  LV+DG+VD DKIG SNFFW+FPSKAV+   N I SLK  I     +    KRK   L   R              D +ER+ KL+RL + ++R   L ++ E LK                              NDP ELE+V    E  ++  N WTDN W+IK++MVK +G++G +VD+ L +K DFD+V
Sbjct:    1 MVKKGLSLEEKRAKILNIYHGTKSIFSLKEIEKAASKQGVVSQTIKDVNQSLVDDGLVDMDKIGPSNFFWSFPSKAVVDRQNLIDSLKRDIAKAEDTAAVNKRKIASLVEERA-------------DTEERQLKLRRLQDNKQRVKQLESEYETLKE-----------------------------NDPAELEKVTNVAEVCKDGVNRWTDNTWSIKSWMVKTRGMSGADVDKYLQIKADFDHV 202          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: D8LRU4_ECTSI (MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU4_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 9.390e-46
Identity = 99/244 (40.57%), Postives = 135/244 (55.33%), Query Frame = 1
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            MV++ LSV+EK++++L I+H+TK + +LKE+EK A + G+  NTVKDVN  LV+DG+VD DKIGASNFFW+FPSK  +T  N + +L++ I     +    KRK  EL   R D +              RR KL RL E   R   L  + E LK                              NDP ELE+V    +  ++  N WTDN W IK++MVK +G++GK+VDR L +K DFD V
Sbjct:    1 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTAANKRKFSELEEGRADTAS-------------RREKLGRLQENGLRLQELEKEYESLKE-----------------------------NDPAELEKVARLTQVCKDGVNRWTDNSWCIKSWMVKTKGMSGKDVDRYLQIKGDFDLV 202          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A7S2XYC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYC3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 4.500e-44
Identity = 94/242 (38.84%), Postives = 139/242 (57.44%), Query Frame = 1
Query:    7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            RK LS++EK++R+L I+H++ EV NLKE+EK A +AG+V  T+KDVN  L++D +VD+DKIG++NFFW+FPSK  +     I SL++QIE +   L  A+ K  +L  A               D + RR  L +L +ER+R + L    + LK                              NDP+EL R++   E  +E  N WTDN+WA+K++ VKK+G+  K+VDR + L +DFDY+
Sbjct:    5 RKGLSLEEKRQRILGIYHSSGEVYNLKEIEKIASKAGVVLQTIKDVNQSLIDDHLVDADKIGSANFFWSFPSKVYVVKKTKIESLQKQIEDSKRQLNAAQDKVADLENA------------GRQDSNTRREGLAKLDQERKRGSELDERLQCLKE-----------------------------NDPEELLRLKNLQEEIKEHVNRWTDNIWAVKSWCVKKKGMPSKDVDRYMQLPQDFDYI 205          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: H3HEE5_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3HEE5_PHYRM)

HSP 1 Score: 160 bits (405), Expect = 8.120e-44
Identity = 93/244 (38.11%), Postives = 140/244 (57.38%), Query Frame = 1
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            M RK +S+ EK+ER+L I+H +KEV NLKE+EK   +AG+V  TVKDVN  LV+D +VD DKIG+ N+FW+FPSK   T    ++ L+++ +T    L   K+  E+  G R              + +ER  KL+RL E++ +   LR   + L                               NDP+ LE++  +V  A+E ++ WTDN++ +K+++VKK+G+ GKEVD+ LG+K+DFDYV
Sbjct:    1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDVLVDCDKIGSGNYFWSFPSKLSQTRRRKLSELEQRHQTAQDKLVKVKQNVEKQKGLRP-------------ESEERVQKLRRLEEQKAKVQVLRTKVQHL-----------------------------AENDPEILEQLERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 202          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A7S3XLC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC7_HETAK)

HSP 1 Score: 151 bits (382), Expect = 9.270e-41
Identity = 94/242 (38.84%), Postives = 127/242 (52.48%), Query Frame = 1
Query:    7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            RK +S +EK+ R+L I+H  KEVLNLKELEK   + G+V  ++K+VN  LV+D +VD+DKIG++NFFW+FPSK        +A L                    LG  R              D  +RRA+LQ+L +E+ REAAL    + LK                              NDP+EL R+  E E  +E AN WTDN+WA+K++ +KK+G+   EVDR L L  DFDYV
Sbjct:    5 RKGVSYEEKRTRILGIYHEKKEVLNLKELEKLGVKQGVVVQSIKEVNQALVDDNLVDTDKIGSANFFWSFPSK--------VAEL--------------------LGAGR-------------HDTPQRRAQLQKLQDEKAREAALDQRLDTLKE-----------------------------NDPRELARIETETEKCKEAANRWTDNIWALKSWCIKKKGMASTEVDRYLQLSSDFDYV 176          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A0W8B6R8_PHYNI (Dephospho-CoA kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8B6R8_PHYNI)

HSP 1 Score: 160 bits (404), Expect = 1.070e-40
Identity = 95/253 (37.55%), Postives = 140/253 (55.34%), Query Frame = 1
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSL---------GXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            M RK +S+ EK+ER+L I+H +KEV NLKE+EK   +AG+V  TVKDVN  LV+D +VD DKIG+ N+FW+FPSK   +    ++ L+++  T   +L   ++  EE    R D            G        + DER  KL+RL E++ +  ALR   + L                               NDP  LE +  +V  A+E ++ WTDN++ +K+++VKK+G+ GKEVD+ LG+K+DFDYV
Sbjct:  272 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQRRHTAQENLAKVQQNIEEQKSLRSDSVRTNISRGNFGGVLMEWIICEQDERVQKLRRLEEQKAKVNALRTKVQHL-----------------------------AENDPAILEELERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 495          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A0P1AFA8_PLAHL (Protein involved in meiotic recombination/predicted coiled-coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFA8_PLAHL)

HSP 1 Score: 150 bits (378), Expect = 7.800e-40
Identity = 92/244 (37.70%), Postives = 135/244 (55.33%), Query Frame = 1
Query:    1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            M RK +S+ EK+ER+L I+H +KEV NLKE+EK   +AG+V  TVKDVN  LV+D +VD DKIG+ N+FW+FPSK   +    ++ L++  +     L+  K K EE    R              D DER  KL+RL E + +  +LR   + L                               NDP  LE +  +V  A+E A+ WTDN++ +K+++VKK+G+ GKEV++ L +++DFDYV
Sbjct:    1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQCRQARQEKLDRVKEKIEEQQALRS-------------DSDERIQKLKRLEELKVKVESLRNTMQHL-----------------------------AENDPAILEDLECKVGIAKEGADRWTDNVFTLKSWVVKKRGVEGKEVNKWLEIQDDFDYV 202          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A8K1FKH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH2_PYTOL)

HSP 1 Score: 145 bits (366), Expect = 4.790e-38
Identity = 82/242 (33.88%), Postives = 135/242 (55.79%), Query Frame = 1
Query:    7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            +K +S++EK+ER+L I+H +K+V N+KE+EK   +AG+V  T+KDVN  LV+D +VD DKIG+ N+FW+FPSK        ++ L+++ ++T   L   K++ E+    R              D D+R AKLQRLAE +     ++A  + L                               NDP  LE +   ++ A+  A+ WTDN++ +++++ +K+G +  EVD+ LG+K+DFDY+
Sbjct:    5 KKGVSLEEKRERILKIYHESKDVYNIKEIEKLGAKAGVVLQTIKDVNQALVDDALVDFDKIGSGNYFWSFPSKVSQQRKRKLSELEQRKQSTSEQLSKVKQEVEKQKSLRT-------------DSDDRVAKLQRLAELQTHVKDMKAKIQHL-----------------------------ADNDPAILEHLERNMQVAKVGADRWTDNVYTVRSWVAQKRGCSTGEVDKWLGIKDDFDYI 204          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A5D6Y0R0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0R0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.910e-36
Identity = 83/242 (34.30%), Postives = 130/242 (53.72%), Query Frame = 1
Query:    7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732
            RK +S++EK+ R+L I+H +K+V NLKE+EK   +AG+V  T+KDVN  LV+DG+VD DKIG+ N+FW+FPSK        +  L+++       L   ++  +E    R              + D+R AKLQRLAE       L+A  + LK                              NDP+ L ++   V+ A+  A+ WTDN++ +++++ +K+G    EVD+ LG+K+DFDY+
Sbjct:    4 RKGVSLEEKRARILHIYHDSKDVFNLKEVEKIGAKAGVVLQTIKDVNQALVDDGLVDCDKIGSGNYFWSFPSKLSQARKRKLGELEQRKAAAQDKLAKVRQSIDEQKSKRT-------------ESDDRAAKLQRLAE-------LQASVKDLKAKVQHLAD----------------------NDPEILAQLERSVQVAKIGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 203          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836C9G9_9STRA1.750e-181100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5J5V9_9PHAE6.120e-1730.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1WCN8_HETAK2.480e-640.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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BLAST of jgi.p|Trimin1|351133 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU23_9STRA1.510e-134100.00Meiotic nuclear division protein 1 n=1 Tax=Tribone... [more]
F5BX17_UNDPI1.710e-4640.16Meiotic nuclear division protein 1 n=1 Tax=Undaria... [more]
D8LRU4_ECTSI9.390e-4640.57MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S2XYC3_9STRA4.500e-4438.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3HEE5_PHYRM8.120e-4438.11Uncharacterized protein n=24 Tax=Phytophthora TaxI... [more]
A0A7S3XLC7_HETAK9.270e-4138.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0W8B6R8_PHYNI1.070e-4037.55Dephospho-CoA kinase domain-containing protein n=2... [more]
A0A0P1AFA8_PLAHL7.800e-4037.70Protein involved in meiotic recombination/predicte... [more]
A0A8K1FKH2_PYTOL4.790e-3833.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y0R0_9STRA1.910e-3634.30Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_81contigContig_81:265488..266680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351133|estExt_Genemark1.C_Ctg_810043
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-12_000020.1
TranscriptId351455
TrackFilteredModels1
ProteinId351133
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351133gene_9763Tribonema minus UTEX_B_3156 geneContig_81 265488..266680 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9763_1exon_9763_1Tribonema minus UTEX_B_3156 exonContig_81 265488..266344 +
exon_9763_2exon_9763_2Tribonema minus UTEX_B_3156 exonContig_81 266436..266680 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_9763UTR5_9763Tribonema minus UTEX_B_3156 five_prime_UTRContig_81 265488..265578 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9763CDS_9763Tribonema minus UTEX_B_3156 CDSContig_81 265579..266344 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_9763UTR3_9763Tribonema minus UTEX_B_3156 three_prime_UTRContig_81 266651..266680 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351133Trimin1|351133|estExt_Genemark1.C_Ctg_810043Tribonema minus UTEX_B_3156 polypeptideContig_81 265579..266650 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9763 ID=mRNA_9763|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1102bp|location=Sequence derived from alignment at Contig_81:265488..266680+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCGCAATAGCGCCGGCGGCAGCAGGCGACCGCAGCAGCGAGACTACAAAG
ACCAGAGACGAGAATGGTGGATACAGGATTCCTCGTCCTCCATGGGCTTC
ATGCGCTGGCTGCGGGGCTTTTACAATGCCCTGTTCTGGTACGGCGCCGC
CTTCGACGATGACGACTCGCTGCCAGCCATGGACTTCAAAGACCTCATGG
AGCAGTACGAGACGGAGGGGGACAGGCGACGAGCGAGGCAGCGCAAGGGC
GCTGCGGAGGCGCCCCTCAGCGGGGGTCGACGCGCCGCCGGCGACAGGCA
AGTCGAGTACCGAGTCCCTCCCACCGAGTACCAGAACGACTCCGACTGGA
AGTTCAGGTGGAATCCAGGCGGCGATCGCGATCGCGCACCGAAACGCACG
TCCACACAACCGGACCGCCGCGCGCCGCCGGCGCGGCGAGCAGGAGGCTC
AGCAGCAGCAGCGCCGCCCGCGCGGCGCCGCGCGCGGCAGCAGGACTCAG
AGCGGGACTCAGAGGAGGAGTTGCGGCGCGCGGCGCTGCGGCGGCGCGCG
CGCGACCTCACCGCGAAGCGCGCCGCGCTCCGGCGCGACCTCGCGAAGGT
CGACGAGCGTTTGAGCGTCCTTGACACGACGCTGGAGCTGTGGCTGCGGC
GCGGGCGCGCGCTCGCGGCGCGGCGGCGCCCGCCCGGCGGCGCCGACGCC
GCGGAGCTCGTGAGCGCAAAGCGGCGCGTGTACAAGCTGCGCGACGACGG
CCGCGCGCTGGAGGCGGCGCGCGTGGAGCTGGCGGGGAGGCTGGAGAACG
CGTCCGCGAACCTCGCGCGCGTGCTGGGGAGCTGGGGGAGCCCGAGCGGG
GGGGGGGCGGGGGTGGGGGAAGGGGATGGGGGGGATGACGCTGCGGCAGT
GGAGGTGGAGGTGGTGGAGGGAGGTGATGCTCAAGAGGAGAGTTCCAGCG
GCAGCGATGATGCGCTGCAAGAAGAGCAGGTGGAGTTTGTGGTGCCCGTC
GTTGAGGTGACTGCGGAGGCTGTGGACGCGGCCATGAGCACGCCTGCGCA
GCAGCTGGACAATGCTTCATAGCACCTGTGTACTGTATGTATGACTGCAA
AC
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protein sequence of jgi.p|Trimin1|351133

>Trimin1|351133|estExt_Genemark1.C_Ctg_810043 ID=Trimin1|351133|estExt_Genemark1.C_Ctg_810043|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=327bp
MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQ
RKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAP
KRTSTQPDRRAPPARRAGGSAAAAPPARRRARQQDSERDSEEELRRAALR
RRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGG
ADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGS
PSGGGAGVGEGDGGDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFV
VPVVEVTAEAVDAAMSTPAQQLDNAS*
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mRNA from alignment at Contig_81:265488..266680+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9763 ID=mRNA_9763|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1193bp|location=Sequence derived from alignment at Contig_81:265488..266680+ (Tribonema minus UTEX_B_3156 )
CCGCAATAGCGCCGGCGGCAGCAGGCGACCGCAGCAGCGAGACTACAAAG ACCAGAGACGAGAATGGTGGATACAGGATTCCTCGTCCTCCATGGGCTTC ATGCGCTGGCTGCGGGGCTTTTACAATGCCCTGTTCTGGTACGGCGCCGC CTTCGACGATGACGACTCGCTGCCAGCCATGGACTTCAAAGACCTCATGG AGCAGTACGAGACGGAGGGGGACAGGCGACGAGCGAGGCAGCGCAAGGGC GCTGCGGAGGCGCCCCTCAGCGGGGGTCGACGCGCCGCCGGCGACAGGCA AGTCGAGTACCGAGTCCCTCCCACCGAGTACCAGAACGACTCCGACTGGA AGTTCAGGTGGAATCCAGGCGGCGATCGCGATCGCGCACCGAAACGCACG TCCACACAACCGGACCGCCGCGCGCCGCCGGCGCGGCGAGCAGGAGGCTC AGCAGCAGCAGCGCCGCCCGCGCGGCGCCGCGCGCGGCAGCAGGACTCAG AGCGGGACTCAGAGGAGGAGTTGCGGCGCGCGGCGCTGCGGCGGCGCGCG CGCGACCTCACCGCGAAGCGCGCCGCGCTCCGGCGCGACCTCGCGAAGGT CGACGAGCGTTTGAGCGTCCTTGACACGACGCTGGAGCTGTGGCTGCGGC GCGGGCGCGCGCTCGCGGCGCGGCGGCGCCCGCCCGGCGGCGCCGACGCC GCGGAGCTCGTGAGCGCAAAGCGGCGCGTGTACAAGCTGCGCGACGACGG CCGCGCGCTGGAGGCGGCGCGCGTGGAGCTGGCGGGGAGGCTGGAGAACG CGTCCGCGAACCTCGCGCGCGTGCTGGGGAGCTGGGGGAGCCCGAGCGGG GGGGGGGGTATGATGGGGGGAGGGATAGGGGGGTGGGGGGTAGGGGGAGG GTGAACGGCAGCAGCGGGGGGCGCGTGGCGCCGGATGCGGGGGCGGAGCG GGGGTGGGGGAAGGGGATGGGGGGGATGACGCTGCGGCAGTGGAGGTGGA GGTGGTGGAGGGAGGTGATGCTCAAGAGGAGAGTTCCAGCGGCAGCGATG ATGCGCTGCAAGAAGAGCAGGTGGAGTTTGTGGTGCCCGTCGTTGAGGTG ACTGCGGAGGCTGTGGACGCGGCCATGAGCACGCCTGCGCAGCAGCTGGA CAATGCTTCATAGCACCTGTGTACTGTATGTATGACTGCAAAC
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Coding sequence (CDS) from alignment at Contig_81:265488..266680+

>mRNA_9763 ID=mRNA_9763|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=981bp|location=Sequence derived from alignment at Contig_81:265488..266680+ (Tribonema minus UTEX_B_3156 )
ATGGGCTTCATGCGCTGGCTGCGGGGCTTTTACAATGCCCTGTTCTGGTA
CGGCGCCGCCTTCGACGATGACGACTCGCTGCCAGCCATGGACTTCAAAG
ACCTCATGGAGCAGTACGAGACGGAGGGGGACAGGCGACGAGCGAGGCAG
CGCAAGGGCGCTGCGGAGGCGCCCCTCAGCGGGGGTCGACGCGCCGCCGG
CGACAGGCAAGTCGAGTACCGAGTCCCTCCCACCGAGTACCAGAACGACT
CCGACTGGAAGTTCAGGTGGAATCCAGGCGGCGATCGCGATCGCGCACCG
AAACGCACGTCCACACAACCGGACCGCCGCGCGCCGCCGGCGCGGCGAGC
AGGAGGCTCAGCAGCAGCAGCGCCGCCCGCGCGGCGCCGCGCGCGGCAGC
AGGACTCAGAGCGGGACTCAGAGGAGGAGTTGCGGCGCGCGGCGCTGCGG
CGGCGCGCGCGCGACCTCACCGCGAAGCGCGCCGCGCTCCGGCGCGACCT
CGCGAAGGTCGACGAGCGTTTGAGCGTCCTTGACACGACGCTGGAGCTGT
GGCTGCGGCGCGGGCGCGCGCTCGCGGCGCGGCGGCGCCCGCCCGGCGGC
GCCGACGCCGCGGAGCTCGTGAGCGCAAAGCGGCGCGTGTACAAGCTGCG
CGACGACGGCCGCGCGCTGGAGGCGGCGCGCGTGGAGCTGGCGGGGAGGC
TGGAGAACGCGTCCGCGAACCTCGCGCGCGTGCTGGGGAGCTGGGGGAGC
CCGAGCGGGGGGGGGGCGGGGGTGGGGGAAGGGGATGGGGGGGATGACGC
TGCGGCAGTGGAGGTGGAGGTGGTGGAGGGAGGTGATGCTCAAGAGGAGA
GTTCCAGCGGCAGCGATGATGCGCTGCAAGAAGAGCAGGTGGAGTTTGTG
GTGCCCGTCGTTGAGGTGACTGCGGAGGCTGTGGACGCGGCCATGAGCAC
GCCTGCGCAGCAGCTGGACAATGCTTCATAG
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