Trimin1|351133|estExt_Genemark1.C_Ctg_810043 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351133
Unique NameTrimin1|351133|estExt_Genemark1.C_Ctg_810043
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length327
Homology
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A836C9G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G9_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 3.670e-182
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
Query:    1 MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS 326
            MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS
Sbjct:    1 MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS 326          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.450e-17
Identity = 83/274 (30.29%), Postives = 120/274 (43.80%), Query Frame = 0
Query:    2 GFMRWLRGFYNALFWYGAAFDD-DDSLPAMDFKDLMEQYETE-GDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDR--------------DRAPKRTST-------------QPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADA-AELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVL 245
            G   W R FYN LFWYG A  + +D LPAM+F+DL+E+++   G++  AR R      P+               VPP +   + D  FRW P G                 RA  R ST             + +R                                       LRR+ R L  +      DL KV +RL V+D T+ELW+RR   + +R    GG++   +++ AKRR+Y L+++GR L++A VEL GRLE+  A L R++
Sbjct:  216 GLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQSSARPR------PI---------------VPPEDLAAEQD--FRWRPSGREATGGATATAESTNWSRAKGRGSTASGGATGSSRRRARRERDERDLDWESVGRAEREMHAAGGRGRREGGDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSR----GGSETDTDVLQAKRRIYGLKEEGRQLDSATVELEGRLEDCRAKLDRIV 462          
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A6V1WCN8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WCN8_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 2.090e-6
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 0
Query:  149 LRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARV 244
            LR +A  L   R  L  ++A+VD+RL VLD +LE+W RR  A+  R   PG   A E+  A+ RV +L+  G  LE    +L  ++ NA+ANL R+
Sbjct:   14 LRAKAGRLARARETLAAEIAQVDDRLRVLDVSLEMWYRRLNAMRRRGLGPG---APEVREARARVEELKALGAVLEREAGDLERQVANAAANLRRI 106          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836C9G9_9STRA3.670e-182100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5J5V9_9PHAE4.450e-1730.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1WCN8_HETAK2.090e-640.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_81contigContig_81:265579..266650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351133mRNA_9763Tribonema minus UTEX_B_3156 mRNAContig_81 265488..266680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351133|estExt_Genemark1.C_Ctg_810043 ID=Trimin1|351133|estExt_Genemark1.C_Ctg_810043|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=327bp
MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQ
RKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAP
KRTSTQPDRRAPPARRAGGSAAAAPPARRRARQQDSERDSEEELRRAALR
RRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGG
ADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGS
PSGGGAGVGEGDGGDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFV
VPVVEVTAEAVDAAMSTPAQQLDNAS*
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