Trimin1|171360|e_gw1.81.163.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|171360
Unique Name	Trimin1\|171360\|e_gw1.81.163.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	101

Homology

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: A0A835YTH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 6.030e-57
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0

Query:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR
Sbjct:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: A0A836CE87_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE87_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.500e-29
Identity = 59/129 (45.74%), Postives = 72/129 (55.81%), Query Frame = 0

Query:    2 FNDIDLDGSGTVDCDEFLL------------------------------LMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            F  +D DG+G VDC+EFL                               L+++L YCLF + QIL FCF  YD            M+LL TVNNASP+FPGNFQ AL+EFD NKDGLIDF+EF+ +DKR
Sbjct:    1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKR 129

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: F0YDP7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDP7_AURAN)

HSP 1 Score: 94.4 bits (233), Expect = 2.830e-23
Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0

Query:    6 DLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEF 94
            DLDGSGT++ DEF  + ++L YC+++K+ IL FCF  YD            M LL +VNN +P+FPGNF   L  FD N DG+IDF EF
Sbjct:    2 DLDGSGTIEFDEF--VAVLLTYCMYSKDDILRFCFDTYDRDHSNSIDEQEFMALLSSVNNGTPMFPGNFTTVLQNFDSNDDGIIDFQEF 88

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: A0A8J2T1V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1V8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.740e-21
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            +F  +DLDGSGT++ DEF  + ++L YC++ K+ IL FCF  +D            M LL TVNN +P+FPGN   AL  FD N DGLIDF EF+ ++ R
Sbjct:  209 LFALMDLDGSGTIEFDEF--IAVLLTYCMYTKDDILRFCFDTFDKDKSNSIDENEFMALLSTVNNGAPLFPGNMGTALMNFDSNDDGLIDFQEFKVIETR 306

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: A0A7S1U8X3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8X3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.880e-19
Identity = 54/100 (54.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            +FN +DLDGSGT++  E+  + +++ YC+++KE IL F F    XXXXXXXXXXX M+L   +NNA+P+FPGN+  A+ +FDVN DGLIDF EF  L+ R
Sbjct:  133 LFNLMDLDGSGTIEFSEY--VRVLVTYCMYSKEDILRFAFDCXXXXXXXXXXXXXFMELCQGINNAAPMFPGNYSTAMKQFDVNDDGLIDFREFSMLNDR 230

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: A0A7S3ZNR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNR4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.910e-18
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            +F  +D+DG+  +D DE+  + + L YC++ K+ IL FCF ++D             ++   V+   P+F GNF+ AL+ FD N DGLIDFDEFR L+ R
Sbjct:  172 LFAMMDMDGNARLDFDEY--VAVALSYCMYTKDDILKFCFDLFDLDSGGTIDEKEFTEMCVAVSAGDPLFSGNFRMALENFDTNDDGLIDFDEFRNLNDR 269

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: K3WVM9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM9_GLOUD)

HSP 1 Score: 80.1 bits (196), Expect = 1.590e-15
Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = 0

Query:    2 FNDIDLDGSGTVDCDEFLLLM------------------------------IILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            F  IDLD SG +D DEF   +                               ++ YC++ +++IL F F  +D              L+  VN+  P+FPGNF+ AL EFD NKDGL+DF+EF+ ++KR
Sbjct:  191 FKQIDLDASGVIDYDEFFEFIDETKTPFSEGLXXXXXXXXXXXXXXXXXVHAMVLYCMYTRDEILQFAFDTFDPAKTGSIGEKEFKRLISVVNDGKPVFPGNFKNALSEFDRNKDGLLDFEEFKIMNKR 319

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: D0NZ23_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NZ23_PHYIT)

HSP 1 Score: 77.8 bits (190), Expect = 2.670e-15
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 0

Query:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            +F  ID D +GT+D +EF+   ++  YC++ +++IL F F  +D              L+  VN+    F GN   AL EFD NKDG+IDF+EF+ L+KR
Sbjct:   70 LFRMIDSDSNGTIDFEEFVHATVL--YCMYTRDEILRFAFDTFDPAASGSIGDKELRRLVSIVNDGQSRFSGNINTALTEFDRNKDGVIDFEEFKNLNKR 167

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: A0A7S2S8V8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8V8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 7.130e-15
Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            +F  ID D +GT++ DE  ++ ++  YC+F++E +L F F  +D            +++   VN A  +FPGN  RA  +FD N DG+IDFDEF+E+++R
Sbjct:  159 LFALIDTDQNGTINFDE--MMQVLTTYCIFSQEDVLNFVFAYHDRDGTGSLDEKEFINMCVEVN-AEGLFPGNLNRAFRQFDTNDDGMIDFDEFKEINRR 255

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BLAST of jgi.p|Trimin1|171360 vs. uniprot
Match: A0A2R5GAC9_9STRA (Calcium-dependent protein kinase 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAC9_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 7.790e-15
Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 0

Query:    1 MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDXXXXXXXXXXXXMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR 100
            +F+ ID+D S T+  +E  ++ ++  +C+FN+  IL + F+ +D            ++++  +N A  +FPGN QRA + FD N DGLIDFDEF+EL+ R
Sbjct:  144 VFSLIDVDNSNTISYNE--MVHVLTTFCIFNQNDILFYIFQQFDKDGSGSLDEHEFIEMIADLN-APAMFPGNLQRAFENFDTNADGLIDFDEFKELNNR 240

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|171360 vs. uniprot

BLAST of jgi.p|Trimin1|171360 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YTH5_9STRA	6.030e-57	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CE87_9STRA	2.500e-29	45.74	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
F0YDP7_AURAN	2.830e-23	49.44	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A8J2T1V8_9STRA	1.740e-21	47.00	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S1U8X3_9STRA	1.880e-19	54.00	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S3ZNR4_9STRA	7.910e-18	40.00	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
K3WVM9_GLOUD	1.590e-15	33.33	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
D0NZ23_PHYIT	2.670e-15	39.00	Uncharacterized protein n=1 Tax=Phytophthora infes...	[more]
A0A7S2S8V8_9STRA	7.130e-15	38.00	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]
A0A2R5GAC9_9STRA	7.790e-15	38.00	Calcium-dependent protein kinase 5 n=1 Tax=Hondaea...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 1..25 e-value: 6.3 score: 11.3 coord: 73..99 e-value: 3.7 score: 13.1 coord: 35..63 e-value: 2.1E-5 score: 33.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 36..96 e-value: 4.5E-13 score: 49.4
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 1..22 e-value: 0.0013 score: 18.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 31..66 score: 14.290241
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 1..28 score: 11.668075
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 74..100 score: 9.241175
None	No IPR available	GENE3D	1.10.238.10		coord: 1..100 e-value: 5.9E-22 score: 80.0
None	No IPR available	PANTHER	PTHR23064:SF58	FAST SKELETAL MUSCLE TROPONIN C	coord: 3..96
None	No IPR available	PANTHER	PTHR23064	TROPONIN	coord: 3..96
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 44..56
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 6..18
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 1..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_81	contig	Contig_81:154965..157298 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|171360	mRNA_9740	Tribonema minus UTEX_B_3156	mRNA	Contig_81 154965..157298 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|171360|e_gw1.81.163.1 ID=Trimin1|171360|e_gw1.81.163.1|Name=jgi.p|Trimin1|171360|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=101bp
MFNDIDLDGSGTVDCDEFLLLMIILKYCLFNKEQILAFCFRMYDTDGSGS
IDEQEFMDLLHTVNNASPIFPGNFQRALDEFDVNKDGLIDFDEFRELDKR
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair