Trimin1|170749|e_gw1.75.41.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|170749
Unique NameTrimin1|170749|e_gw1.75.41.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length148
Homology
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A836C8Y8_9STRA (Putative GTPase activating protein for Arf-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y8_9STRA)

HSP 1 Score: 286 bits (733), Expect = 7.720e-98
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query:    1 MASEDRRIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQARRASARARNEEAR 147
            MASEDRRIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQARRASARARNEEAR
Sbjct:    1 MASEDRRIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQARRASARARNEEAR 147          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: D8LD15_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD15_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 6.960e-49
Identity = 77/124 (62.10%), Postives = 95/124 (76.61%), Query Frame = 0
Query:   11 LKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQA 134
            L+  QK   NKRCADCTERLP +I+ DF TFVCTACSGIHREFSHR+KS+SLA F+++EV A++ GGN  SN L++A+Y P  DLPEP+G    K REFIR KY +KRWY T EDLA + + +A
Sbjct:   20 LRACQKEPGNKRCADCTERLPQWIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNETSNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLANDRQREA 143          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A6H5KW83_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW83_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 9.280e-48
Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = 0
Query:   11 LKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQARRASARARNE 144
            L+  QK   NKRCADCTERLP YI+ DF TFVCTACSGIHREFSHR+KS+SLA F+++EV A++ GGN ASN L++A+Y P  DLPEP+G    K REFIR KY +KRWY T EDLA++ + +A R  +RA+ +
Sbjct:   20 LRACQKEPGNKRCADCTERLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNEASNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLAQDRQREAEREESRAKRD 153          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A7S1LNS8_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LNS8_ALECA)

HSP 1 Score: 131 bits (329), Expect = 4.870e-36
Identity = 63/113 (55.75%), Postives = 82/113 (72.57%), Query Frame = 0
Query:    7 RIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRW 119
            RIRA + ++K   NK+CADC E  P YI L F TFVCT CSG+HREFSH++K +S++ +T +EV  I +GGN  + D WLA++DP RD PEPD S   K R+FIRMKY ++RW
Sbjct:   12 RIRAFQRSEKA--NKKCADCKEVGPTYICLSFTTFVCTTCSGLHREFSHKVKGISVSKWTPEEVEEIERGGNARAADKWLARWDP-RDYPEPDSSDQSKCRDFIRMKYVDRRW 121          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A0M0K2F0_9EUKA (Arf gtpase activating protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K2F0_9EUKA)

HSP 1 Score: 130 bits (327), Expect = 7.740e-36
Identity = 63/115 (54.78%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    9 RALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATT 123
            R LK+ QK+ ENK C DC  R   Y+VL+F TFVCTACSGIHRE  H+IKSV ++ FT DE++A+  GGN  +  +W+AKYD  RD   P     EK R F++ KYQEKRWY+ T
Sbjct:   13 RILKECQKKPENKSCFDCMGRGNQYVVLNFNTFVCTACSGIHREMQHKIKSVGMSTFTTDEIKAVDAGGNDKAQKMWMAKYDA-RDGAVPAEGETEKLRAFLKRKYQEKRWYSET 126          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A7S3BW33_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BW33_9EUKA)

HSP 1 Score: 128 bits (322), Expect = 3.710e-35
Identity = 60/113 (53.10%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    9 RALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYA 121
            R LK+ QKR EN++C DCT R   Y+VLDF TFVCT CSGIHRE  HRIKSV ++ F+ DE++ + K GN  +  +W+A Y+P  D+  P      K REFI+MKY +KRWY+
Sbjct:    2 RLLKEIQKRPENRKCFDCTGRANQYVVLDFNTFVCTTCSGIHRELQHRIKSVGMSTFSTDEIKTLDKMGNAVATSIWMATYNPS-DMAIPTEDDHPKIREFIKMKYHKKRWYS 113          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A4D9DD40_9STRA (Arf-GAP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD40_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.390e-34
Identity = 64/117 (54.70%), Postives = 88/117 (75.21%), Query Frame = 0
Query:    4 EDRRIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWY 120
            E+R +RA+KD  K   NKRCADCTE+LP Y+ L F TF+CTACSGIHREFSHR+KS+SL+ F+ +EV+A++ GGN A   ++LA+++P RD  EP      + R++IR KY E+RW+
Sbjct:    9 EERLLRAVKDLSKLPGNKRCADCTEKLPQYVNLTFNTFICTACSGIHREFSHRVKSISLSTFSLEEVKALKDGGNEACAAMYLARWEP-RDYAEPQAGDEHRIRDWIRHKYVERRWH 124          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A7S1APG6_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APG6_NOCSC)

HSP 1 Score: 127 bits (319), Expect = 2.290e-34
Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    7 RIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRW 119
            RIRA +   K   NKRCADCTE  P Y+ + F TFVCT CSG+HREFSH++K +S++ F+ +EV  + +GGN  + D+W+A+++P RD PEPD S   K REF+R KY +K+W
Sbjct:   12 RIRAFQRGDKA--NKRCADCTELGPTYVCMTFGTFVCTTCSGLHREFSHKVKGISVSKFSVEEVEELERGGNAKAFDIWMARWEP-RDCPEPDNSEQGKVREFLRQKYVDKKW 121          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A7S2KRS9_9DINO (Hypothetical protein (Fragment) n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KRS9_9DINO)

HSP 1 Score: 126 bits (317), Expect = 1.250e-33
Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 0
Query:    7 RIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQARR 136
            RIRA + + K   NKRCADCTE  P Y+ L + TFVCT CSG+HREFSH+IK +S++ +T +EV  I +GGN  + + +LA++DP RD  EPD S   + REFIRMKY ++RW    +D  R+ + + RR
Sbjct:   12 RIRAFQRSDKA--NKRCADCTEVGPTYVCLSYYTFVCTTCSGLHREFSHKIKGISISKWTPEEVDEIEQGGNAKAAEKFLARWDP-RDFAEPDSSDPNRCREFIRMKYIDRRWTNRGDDSGRDRDAKPRR 138          
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Match: A0A0M0K1I0_9EUKA (Putative ADP-ribosylation factor gtpase-activating protein agd14-like protein n=2 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1I0_9EUKA)

HSP 1 Score: 123 bits (308), Expect = 3.340e-33
Identity = 61/110 (55.45%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    9 RALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKR 118
            R LK+ QK+ ENK C DC  R   Y+VL+F TFVCTACSGIHRE  H+IKSV ++ FT DE++A+  GGN  +  +W+AKYD  RD   P    VEK R F++ KYQEKR
Sbjct:   13 RILKECQKKPENKSCFDCMGRGNQYVVLNFNTFVCTACSGIHREMQHKIKSVGMSTFTTDEIKAVDAGGNDKAQKMWMAKYDA-RDGAVPAEGEVEKLRAFLKRKYQEKR 121          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170749 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8Y8_9STRA7.720e-98100.00Putative GTPase activating protein for Arf-domain-... [more]
D8LD15_ECTSI6.960e-4962.10Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KW83_9PHAE9.280e-4861.19Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S1LNS8_ALECA4.870e-3655.75Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A0M0K2F0_9EUKA7.740e-3654.78Arf gtpase activating protein n=1 Tax=Chrysochromu... [more]
A0A7S3BW33_9EUKA3.710e-3553.10Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A4D9DD40_9STRA1.390e-3454.70Arf-GAP domain-containing protein n=1 Tax=Nannochl... [more]
A0A7S1APG6_NOCSC2.290e-3452.21Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A7S2KRS9_9DINO1.250e-3350.00Hypothetical protein (Fragment) n=2 Tax=Brandtodin... [more]
A0A0M0K1I0_9EUKA3.340e-3355.45Putative ADP-ribosylation factor gtpase-activating... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..147
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availablePANTHERPTHR46085:SF3OS02G0208900 PROTEINcoord: 4..121
NoneNo IPR availableCDDcd08838ArfGap_AGFGcoord: 5..121
e-value: 4.47128E-61
score: 182.009
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 20..39
score: 27.76
coord: 39..56
score: 37.36
coord: 57..78
score: 29.0
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 2..127
e-value: 6.0E-18
score: 75.6
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 10..121
e-value: 1.7E-30
score: 105.5
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 5..130
score: 18.252052
IPR038508ArfGAP domain superfamilyGENE3D1.10.220.150Arf GTPase activating proteincoord: 2..132
e-value: 7.6E-36
score: 125.0
IPR044820ADP-ribosylation factor GTPase-activating protein AGD14-likePANTHERPTHR46085ARFGAP/RECO-RELATEDcoord: 4..121
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 11..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_75contigContig_75:650298..651009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170749mRNA_7681Tribonema minus UTEX_B_3156 mRNAContig_75 650298..651009 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|170749|e_gw1.75.41.1 ID=Trimin1|170749|e_gw1.75.41.1|Name=jgi.p|Trimin1|170749|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=148bp
MASEDRRIRALKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIH
REFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDG
SSVEKRREFIRMKYQEKRWYATTEDLAREAEEQARRASARARNEEAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR044820AGD14-like
IPR037278ARFGAP/RecO